RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 K7ERJ3 54 aa2.14□□□□□ -2.07
CSDE1-212ENST00000529046 DLEU1O43261 78 aa2.14□□□□□ -2.07
CSDE1-212ENST00000529046 FXYD2P54710 66 aa2.14□□□□□ -2.07
CSDE1-212ENST00000529046 ATOH7Q8N100 152 aa2.14□□□□□ -2.07
CSDE1-212ENST00000529046 Q96NJ1 140 aa2.14□□□□□ -2.07
CSDE1-212ENST00000529046 C12orf57Q99622 126 aa2.14□□□□□ -2.07
CSDE1-212ENST00000529046 FCGBPQ9Y6R7 5405 aaPredicted RBP2.14□□□□□ -2.07
CSDE1-212ENST00000529046 J3QR89 54 aa2.13□□□□□ -2.07
CSDE1-212ENST00000529046 P0C880 135 aa2.13□□□□□ -2.07
CSDE1-212ENST00000529046 KRTAP6-3Q3LI67 103 aa2.13□□□□□ -2.07
CSDE1-212ENST00000529046 BRK1Q8WUW1 75 aa2.13□□□□□ -2.07
CSDE1-212ENST00000529046 TRBV7-4A0A0J9YYF1 115 aa2.12□□□□□ -2.07
CSDE1-212ENST00000529046 H3BMG7 143 aa2.12□□□□□ -2.07
CSDE1-212ENST00000529046 COX8AP10176 69 aa2.12□□□□□ -2.07
CSDE1-212ENST00000529046 HIGD1BQ9P298 99 aa2.12□□□□□ -2.07
CSDE1-212ENST00000529046 A0A087WSZ3 146 aa2.11□□□□□ -2.07
CSDE1-212ENST00000529046 H3BUT2 72 aa2.11□□□□□ -2.07
CSDE1-212ENST00000529046 MT2AP02795 61 aa2.11□□□□□ -2.07
CSDE1-212ENST00000529046 IGKV4-1P06312 121 aa2.11□□□□□ -2.07
CSDE1-212ENST00000529046 HRES1P13985 223 aa2.11□□□□□ -2.07
CSDE1-212ENST00000529046 K7ERU9 68 aa2.1□□□□□ -2.07
CSDE1-212ENST00000529046 C7orf65Q6ZTY9 151 aa2.1□□□□□ -2.07
CSDE1-212ENST00000529046 MACF1Q9UPN3 7388 aaKnown RBP2.09□□□□□ -2.07
CSDE1-212ENST00000529046 A0A1W2PNM2 257 aa2.09□□□□□ -2.07
CSDE1-212ENST00000529046 Q6ZQT0 140 aa2.09□□□□□ -2.07
CSDE1-212ENST00000529046 RAB37Q96AX2 223 aa2.09□□□□□ -2.07
CSDE1-212ENST00000529046 LINC00472Q9H8W2 130 aa2.09□□□□□ -2.07
CSDE1-212ENST00000529046 LINC00846Q9NV44 126 aa2.09□□□□□ -2.07
CSDE1-212ENST00000529046 MT1FP04733 61 aa2.08□□□□□ -2.08
CSDE1-212ENST00000529046 TMEM258P61165 79 aa2.08□□□□□ -2.08
CSDE1-212ENST00000529046 PRO1854Q9UHT4 67 aa2.08□□□□□ -2.08
CSDE1-212ENST00000529046 KRTAP19-6Q3LI70 58 aa2.07□□□□□ -2.08
CSDE1-212ENST00000529046 ZCCHC13Q8WW36 166 aaKnown RBP2.07□□□□□ -2.08
CSDE1-212ENST00000529046 ORMDL1Q9P0S3 153 aa2.07□□□□□ -2.08
CSDE1-212ENST00000529046 SYNE2Q8WXH0 6885 aaKnown RBP2.06□□□□□ -2.08
CSDE1-212ENST00000529046 UQCRQO14949 82 aa2.06□□□□□ -2.08
CSDE1-212ENST00000529046 DNAL4O96015 105 aa2.06□□□□□ -2.08
CSDE1-212ENST00000529046 HMCN1Q96RW7 5635 aa2.05□□□□□ -2.08
CSDE1-212ENST00000529046 TRACP01848 142 aa2.05□□□□□ -2.08
CSDE1-212ENST00000529046 CCKP06307 115 aa2.05□□□□□ -2.08
CSDE1-212ENST00000529046 COX6CP09669 75 aa2.05□□□□□ -2.08
CSDE1-212ENST00000529046 SPINK7P58062 85 aa2.05□□□□□ -2.08
CSDE1-212ENST00000529046 SPATA45Q537H7 98 aa2.05□□□□□ -2.08
CSDE1-212ENST00000529046 C14orf144Q96I85 54 aa2.05□□□□□ -2.08
CSDE1-212ENST00000529046 RBM3P98179 157 aaKnown RBP2.04□□□□□ -2.08
CSDE1-212ENST00000529046 C14orf132Q9NPU4 83 aa2.04□□□□□ -2.08
CSDE1-212ENST00000529046 FAM236AA0A1B0GUQ0 79 aa2.03□□□□□ -2.08
CSDE1-212ENST00000529046 FAM236BA0A1B0GV22 79 aa2.03□□□□□ -2.08
CSDE1-212ENST00000529046 BAALC-AS2P0C853 105 aa2.03□□□□□ -2.08
CSDE1-212ENST00000529046 HSD52Q0P140 79 aa2.03□□□□□ -2.08
CSDE1-212ENST00000529046 KRTAP21-2Q3LI59 83 aa2.03□□□□□ -2.08
CSDE1-212ENST00000529046 DSCR8Q96T75 97 aa2.03□□□□□ -2.08
CSDE1-212ENST00000529046 VAMP8Q9BV40 100 aa2.03□□□□□ -2.08
CSDE1-212ENST00000529046 NDUFB1O75438 58 aa2.02□□□□□ -2.09
CSDE1-212ENST00000529046 ROMO1P60602 79 aa2.02□□□□□ -2.09
CSDE1-212ENST00000529046 hDV103S1A0JD37 113 aa2.01□□□□□ -2.09
CSDE1-212ENST00000529046 PDE6GP18545 87 aa2.01□□□□□ -2.09
CSDE1-212ENST00000529046 WFDC13Q8IUB5 93 aa2.01□□□□□ -2.09
CSDE1-212ENST00000529046 NAA38Q9BRA0 125 aaKnown RBP2.01□□□□□ -2.09
CSDE1-212ENST00000529046 PRO2289Q9P1D8 64 aa2.01□□□□□ -2.09
CSDE1-212ENST00000529046 LOC110117498A0A087WWA1 95 aa2□□□□□ -2.09
CSDE1-212ENST00000529046 JMJD7-PLA2G4BH0Y9G9 81 aa2□□□□□ -2.09
CSDE1-212ENST00000529046 KRTAP12-4P60329 112 aa1.99□□□□□ -2.09
CSDE1-212ENST00000529046 H1FX-AS1Q4G0G2 97 aa1.99□□□□□ -2.09
CSDE1-212ENST00000529046 TMEM254Q8TBM7 123 aa1.99□□□□□ -2.09
CSDE1-212ENST00000529046 IGKV3D-7A0A0C4DH55 119 aa1.98□□□□□ -2.09
CSDE1-212ENST00000529046 SMIM6P0DI80 62 aa1.98□□□□□ -2.09
CSDE1-212ENST00000529046 KRTAP12-3P60328 96 aa1.98□□□□□ -2.09
CSDE1-212ENST00000529046 PYY3Q5JQD4 70 aa1.98□□□□□ -2.09
CSDE1-212ENST00000529046 UQCR10Q9UDW1 63 aa1.98□□□□□ -2.09
CSDE1-212ENST00000529046 MRPL34Q9BQ48 92 aaKnown RBP1.97□□□□□ -2.09
CSDE1-212ENST00000529046 ATXN8Q156A1 80 aa1.96□□□□□ -2.1
CSDE1-212ENST00000529046 NREPQ16612 68 aa1.96□□□□□ -2.1
CSDE1-212ENST00000529046 MMP24-AS1A0A0U1RRL7 71 aa1.95□□□□□ -2.1
CSDE1-212ENST00000529046 NEBP20929 6669 aa1.94□□□□□ -2.1
CSDE1-212ENST00000529046 A6NN06 94 aa1.93□□□□□ -2.1
CSDE1-212ENST00000529046 M0R143 59 aa1.93□□□□□ -2.1
CSDE1-212ENST00000529046 CASC2Q6XLA1 102 aa1.93□□□□□ -2.1
CSDE1-212ENST00000529046 SPRR2GQ9BYE4 73 aa1.93□□□□□ -2.1
CSDE1-212ENST00000529046 CCDC179H3BU77 68 aa1.92□□□□□ -2.1
CSDE1-212ENST00000529046 K7EQZ3 153 aa1.92□□□□□ -2.1
CSDE1-212ENST00000529046 KRTAP19-8Q3LI54 63 aa1.92□□□□□ -2.1
CSDE1-212ENST00000529046 MUC12Q9UKN1 5478 aa1.91□□□□□ -2.1
CSDE1-212ENST00000529046 MT1BP07438 61 aa1.91□□□□□ -2.1
CSDE1-212ENST00000529046 Q1T7F1 81 aa1.91□□□□□ -2.1
CSDE1-212ENST00000529046 Q5VV11 94 aa1.9□□□□□ -2.11
CSDE1-212ENST00000529046 CSAG1Q6PB30 78 aa1.9□□□□□ -2.11
CSDE1-212ENST00000529046 MDN1Q9NU22 5596 aa1.89□□□□□ -2.11
CSDE1-212ENST00000529046 MIR22HGQ0VDD5 57 aa1.89□□□□□ -2.11
CSDE1-212ENST00000529046 GTF2H5Q6ZYL4 71 aa1.89□□□□□ -2.11
CSDE1-212ENST00000529046 CRIPTQ9P021 101 aa1.89□□□□□ -2.11
CSDE1-212ENST00000529046 HCG22E2RYF7 251 aa1.88□□□□□ -2.11
CSDE1-212ENST00000529046 KLKP1Q107X0 134 aa1.88□□□□□ -2.11
CSDE1-212ENST00000529046 KMT2DO14686 5537 aa1.88□□□□□ -2.11
CSDE1-212ENST00000529046 TP53AIP1Q9HCN2 124 aa1.87□□□□□ -2.11
CSDE1-212ENST00000529046 SERP1Q9Y6X1 66 aa1.87□□□□□ -2.11
CSDE1-212ENST00000529046 S4R3F8 94 aa1.87□□□□□ -2.11
CSDE1-212ENST00000529046 KRTAP20-1Q3LI63 56 aa1.86□□□□□ -2.11
CSDE1-212ENST00000529046 A0A1W2PPM0 123 aa1.85□□□□□ -2.11
CSDE1-212ENST00000529046 F8W1H4 67 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms