RNA–Protein interactions for RNA: ENST00000528252.5

SOX6-210, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SOX6, Length 2,707 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-210ENST00000528252 P0C880 135 aa4.54□□□□□ -1.68
SOX6-210ENST00000528252 LCE2CQ5TA81 110 aa4.54□□□□□ -1.68
SOX6-210ENST00000528252 Q8N1X5 172 aa4.53□□□□□ -1.68
SOX6-210ENST00000528252 C9orf92A6NGG3 77 aa4.52□□□□□ -1.69
SOX6-210ENST00000528252 KRTAP10-8P60410 259 aa4.52□□□□□ -1.69
SOX6-210ENST00000528252 LCE2AQ5TA79 106 aaPredicted RBP4.52□□□□□ -1.69
SOX6-210ENST00000528252 A8MUU9 505 aa4.51□□□□□ -1.69
SOX6-210ENST00000528252 CRIPTQ9P021 101 aa4.51□□□□□ -1.69
SOX6-210ENST00000528252 EPPK1P58107 5090 aaKnown RBP4.5□□□□□ -1.69
SOX6-210ENST00000528252 IGKV2-30P06310 120 aa4.49□□□□□ -1.69
SOX6-210ENST00000528252 TNXBP22105 4242 aa4.49□□□□□ -1.69
SOX6-210ENST00000528252 IGKV2D-30A0A075B6S6 120 aa4.48□□□□□ -1.69
SOX6-210ENST00000528252 MYCBP2O75592 4640 aa4.47□□□□□ -1.69
SOX6-210ENST00000528252 KRTAP23-1A1A580 65 aa4.47□□□□□ -1.69
SOX6-210ENST00000528252 H0YAA0 97 aa4.47□□□□□ -1.69
SOX6-210ENST00000528252 C20orf166-AS1Q96NR2 134 aa4.45□□□□□ -1.7
SOX6-210ENST00000528252 FAT3Q8TDW7 4589 aa4.45□□□□□ -1.7
SOX6-210ENST00000528252 LCE2BO14633 110 aa4.44□□□□□ -1.7
SOX6-210ENST00000528252 MT1HL1P0DM35 61 aa4.43□□□□□ -1.7
SOX6-210ENST00000528252 KRTAP4-5Q9BYR2 181 aa4.4□□□□□ -1.71
SOX6-210ENST00000528252 NDUFAF8A1L188 74 aa4.37□□□□□ -1.71
SOX6-210ENST00000528252 SPINT4Q6UDR6 99 aa4.36□□□□□ -1.71
SOX6-210ENST00000528252 A0A1B0GU33 70 aa4.34□□□□□ -1.71
SOX6-210ENST00000528252 XP32Q5T750 250 aa4.34□□□□□ -1.72
SOX6-210ENST00000528252 RPL37P61927 97 aaKnown RBP4.32□□□□□ -1.72
SOX6-210ENST00000528252 H1FX-AS1Q4G0G2 97 aa4.31□□□□□ -1.72
SOX6-210ENST00000528252 LUZP6Q538Z0 58 aa4.3□□□□□ -1.72
SOX6-210ENST00000528252 TPRXLQ17RH7 258 aa4.29□□□□□ -1.72
SOX6-210ENST00000528252 KRTAP3-1Q9BYR8 98 aa4.29□□□□□ -1.72
SOX6-210ENST00000528252 ABCA13Q86UQ4 5058 aa4.28□□□□□ -1.72
SOX6-210ENST00000528252 KRTAP15-1Q3LI76 137 aa4.28□□□□□ -1.72
SOX6-210ENST00000528252 K7ERS5 55 aa4.27□□□□□ -1.73
SOX6-210ENST00000528252 HERC2O95714 4834 aa4.26□□□□□ -1.73
SOX6-210ENST00000528252 C10orf95Q9H7T3 257 aa4.25□□□□□ -1.73
SOX6-210ENST00000528252 COX6B2Q6YFQ2 88 aa4.25□□□□□ -1.73
SOX6-210ENST00000528252 LRP2P98164 4655 aa4.24□□□□□ -1.73
SOX6-210ENST00000528252 BIRC6Q9NR09 4857 aa4.23□□□□□ -1.73
SOX6-210ENST00000528252 LPAP08519 4548 aa4.22□□□□□ -1.73
SOX6-210ENST00000528252 LORP23490 312 aaPredicted RBP4.19□□□□□ -1.74
SOX6-210ENST00000528252 A0A0D9SG42 100 aa4.16□□□□□ -1.74
SOX6-210ENST00000528252 KRTAP13-4Q3LI77 160 aa4.13□□□□□ -1.75
SOX6-210ENST00000528252 S4R3F8 94 aa4.11□□□□□ -1.75
SOX6-210ENST00000528252 PCLOQ9Y6V0 5065 aa4.1□□□□□ -1.75
SOX6-210ENST00000528252 HERC1Q15751 4861 aa4.07□□□□□ -1.76
SOX6-210ENST00000528252 KRTAP10-6P60371 365 aaPredicted RBP4.07□□□□□ -1.76
SOX6-210ENST00000528252 KRTAP4-1Q9BYQ7 146 aa4.06□□□□□ -1.76
SOX6-210ENST00000528252 KRTAP12-2P59991 146 aa4.02□□□□□ -1.77
SOX6-210ENST00000528252 MUC17Q685J3 4493 aa4.02□□□□□ -1.77
SOX6-210ENST00000528252 MUC2Q02817 5179 aa4□□□□□ -1.77
SOX6-210ENST00000528252 HMCN2Q8NDA2 5059 aa3.99□□□□□ -1.77
SOX6-210ENST00000528252 KRTAP19-2Q3LHN2 52 aa3.95□□□□□ -1.78
SOX6-210ENST00000528252 KRTAP12-1P59990 96 aa3.93□□□□□ -1.78
SOX6-210ENST00000528252 CAMK2N1Q7Z7J9 78 aa3.9□□□□□ -1.79
SOX6-210ENST00000528252 PLAC4Q8WY50 150 aa3.89□□□□□ -1.79
SOX6-210ENST00000528252 FLGP20930 4061 aaPredicted RBP3.86□□□□□ -1.79
SOX6-210ENST00000528252 UBR4Q5T4S7 5183 aa3.86□□□□□ -1.79
SOX6-210ENST00000528252 RNF213Q63HN8 5207 aa3.84□□□□□ -1.8
SOX6-210ENST00000528252 M0QZ58 72 aa3.84□□□□□ -1.8
SOX6-210ENST00000528252 R4GN34 69 aa3.81□□□□□ -1.8
SOX6-210ENST00000528252 FAT4Q6V0I7 4981 aa3.81□□□□□ -1.8
SOX6-210ENST00000528252 M0R2T5 61 aa3.73□□□□□ -1.81
SOX6-210ENST00000528252 MT1HP80294 61 aa3.72□□□□□ -1.81
SOX6-210ENST00000528252 MT2AP02795 61 aa3.61□□□□□ -1.83
SOX6-210ENST00000528252 KRTAP9-8Q9BYQ0 159 aa3.61□□□□□ -1.83
SOX6-210ENST00000528252 KRTAP10-10P60014 251 aa3.6□□□□□ -1.83
SOX6-210ENST00000528252 MT1FP04733 61 aa3.6□□□□□ -1.83
SOX6-210ENST00000528252 KRTAP19-1Q8IUB9 90 aa3.59□□□□□ -1.83
SOX6-210ENST00000528252 SPRR2GQ9BYE4 73 aa3.58□□□□□ -1.84
SOX6-210ENST00000528252 PP632Q6XCG6 107 aa3.57□□□□□ -1.84
SOX6-210ENST00000528252 PRO2289Q9P1D8 64 aa3.54□□□□□ -1.84
SOX6-210ENST00000528252 SPRR5A0A1B0GTR4 108 aa3.52□□□□□ -1.85
SOX6-210ENST00000528252 KRTAP9-3Q9BYQ3 159 aa3.46□□□□□ -1.86
SOX6-210ENST00000528252 KRTAP19-8Q3LI54 63 aa3.46□□□□□ -1.86
SOX6-210ENST00000528252 MT1BP07438 61 aa3.43□□□□□ -1.86
SOX6-210ENST00000528252 TNP1P09430 55 aa3.42□□□□□ -1.86
SOX6-210ENST00000528252 INE1O15225 51 aa3.38□□□□□ -1.87
SOX6-210ENST00000528252 KRTAP10-5P60370 271 aa3.35□□□□□ -1.87
SOX6-210ENST00000528252 MT1XP80297 61 aa3.35□□□□□ -1.87
SOX6-210ENST00000528252 USH2AO75445 5202 aa3.32□□□□□ -1.88
SOX6-210ENST00000528252 LCE3AQ5TA76 89 aa3.28□□□□□ -1.89
SOX6-210ENST00000528252 LCE5AQ5TCM9 118 aa3.26□□□□□ -1.89
SOX6-210ENST00000528252 KRTAP10-7P60409 375 aaPredicted RBP3.24□□□□□ -1.89
SOX6-210ENST00000528252 KRTAP10-12P60413 245 aa3.22□□□□□ -1.89
SOX6-210ENST00000528252 KRTAP9-4Q9BYQ2 154 aa3.2□□□□□ -1.9
SOX6-210ENST00000528252 KRTAP8-1Q8IUC2 63 aa3.19□□□□□ -1.9
SOX6-210ENST00000528252 FSIP2Q5CZC0 6907 aa3.16□□□□□ -1.9
SOX6-210ENST00000528252 KMT2DO14686 5537 aa3.14□□□□□ -1.91
SOX6-210ENST00000528252 SSPOA2VEC9 5147 aa3.14□□□□□ -1.91
SOX6-210ENST00000528252 KRTAP12-3P60328 96 aa3.13□□□□□ -1.91
SOX6-210ENST00000528252 KRTAP19-4Q3LI73 84 aa3.11□□□□□ -1.91
SOX6-210ENST00000528252 KRTAP4-8A0A0G2JLE6 195 aa3.11□□□□□ -1.91
SOX6-210ENST00000528252 KRTAP9-9Q9BYP9 154 aa3.11□□□□□ -1.91
SOX6-210ENST00000528252 KRTAP4-8Q9BYQ9 185 aa3.11□□□□□ -1.91
SOX6-210ENST00000528252 KRTAP19-6Q3LI70 58 aa3.08□□□□□ -1.92
SOX6-210ENST00000528252 KRTAP19-5Q3LI72 72 aa3.07□□□□□ -1.92
SOX6-210ENST00000528252 LCE4AQ5TA78 99 aa3.06□□□□□ -1.92
SOX6-210ENST00000528252 KRTAP9-6A0A140TA67 174 aa3.05□□□□□ -1.92
SOX6-210ENST00000528252 KRTAP9-7A8MTY7 169 aa3.05□□□□□ -1.92
SOX6-210ENST00000528252 FCGBPQ9Y6R7 5405 aaPredicted RBP3□□□□□ -1.93
SOX6-210ENST00000528252 KRTAP19-7Q3SYF9 63 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms