RNA–Protein interactions for RNA: ENST00000528225.5

ARHGEF12-206, Transcript of Rho guanine nucleotide exchange factor 12, humanhuman

TSL 5

Gene ARHGEF12, Length 2,647 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF12-206ENST00000528225 FAT2Q9NYQ8 4349 aa4.26□□□□□ -1.73
ARHGEF12-206ENST00000528225 NDUFAF8A1L188 74 aa4.25□□□□□ -1.73
ARHGEF12-206ENST00000528225 S4R3F8 94 aa4.24□□□□□ -1.73
ARHGEF12-206ENST00000528225 HYDINQ4G0P3 5121 aa4.24□□□□□ -1.73
ARHGEF12-206ENST00000528225 KRTAP12-2P59991 146 aa4.21□□□□□ -1.74
ARHGEF12-206ENST00000528225 PKHD1L1Q86WI1 4243 aa4.21□□□□□ -1.74
ARHGEF12-206ENST00000528225 DMBT1Q9UGM3 2413 aaPredicted RBP4.2□□□□□ -1.74
ARHGEF12-206ENST00000528225 KRTAP10-4P60372 401 aaPredicted RBP4.18□□□□□ -1.74
ARHGEF12-206ENST00000528225 KRTAP10-8P60410 259 aa4.17□□□□□ -1.74
ARHGEF12-206ENST00000528225 KRTAP12-1P59990 96 aa4.16□□□□□ -1.74
ARHGEF12-206ENST00000528225 PKHD1P08F94 4074 aa4.16□□□□□ -1.74
ARHGEF12-206ENST00000528225 APOBP04114 4563 aaKnown RBP4.14□□□□□ -1.75
ARHGEF12-206ENST00000528225 DYNC1H1Q14204 4646 aaKnown RBP4.11□□□□□ -1.75
ARHGEF12-206ENST00000528225 M0QZ58 72 aa4.09□□□□□ -1.75
ARHGEF12-206ENST00000528225 FAT1Q14517 4588 aa4.09□□□□□ -1.75
ARHGEF12-206ENST00000528225 FAT3Q8TDW7 4589 aa4.08□□□□□ -1.76
ARHGEF12-206ENST00000528225 A0A0A0MQY5 61 aa4.07□□□□□ -1.76
ARHGEF12-206ENST00000528225 A0A1B0GVY2 172 aa4.07□□□□□ -1.76
ARHGEF12-206ENST00000528225 LRP1Q07954 4544 aaKnown RBP4.06□□□□□ -1.76
ARHGEF12-206ENST00000528225 HSPG2P98160 4391 aa4.03□□□□□ -1.76
ARHGEF12-206ENST00000528225 TNXBP22105 4242 aa4.01□□□□□ -1.77
ARHGEF12-206ENST00000528225 DNHD1Q96M86 4753 aa4□□□□□ -1.77
ARHGEF12-206ENST00000528225 PLAC4Q8WY50 150 aa3.99□□□□□ -1.77
ARHGEF12-206ENST00000528225 R4GN34 69 aa3.95□□□□□ -1.78
ARHGEF12-206ENST00000528225 Q5VSD8 79 aa3.93□□□□□ -1.78
ARHGEF12-206ENST00000528225 LUZP6Q538Z0 58 aa3.91□□□□□ -1.78
ARHGEF12-206ENST00000528225 MYCBP2O75592 4640 aa3.9□□□□□ -1.79
ARHGEF12-206ENST00000528225 MT1HL1P0DM35 61 aa3.85□□□□□ -1.79
ARHGEF12-206ENST00000528225 LORP23490 312 aaPredicted RBP3.85□□□□□ -1.79
ARHGEF12-206ENST00000528225 LPAP08519 4548 aa3.84□□□□□ -1.79
ARHGEF12-206ENST00000528225 PP632Q6XCG6 107 aa3.84□□□□□ -1.8
ARHGEF12-206ENST00000528225 KRTAP21-3Q3LHN1 58 aa3.83□□□□□ -1.8
ARHGEF12-206ENST00000528225 KMT2CQ8NEZ4 4911 aaKnown RBP3.81□□□□□ -1.8
ARHGEF12-206ENST00000528225 LOC100996750A0A140TA64 210 aa3.8□□□□□ -1.8
ARHGEF12-206ENST00000528225 KRTAP4-6Q9BYQ5 205 aa3.8□□□□□ -1.8
ARHGEF12-206ENST00000528225 RYR2Q92736 4967 aa3.8□□□□□ -1.8
ARHGEF12-206ENST00000528225 LCE2BO14633 110 aa3.8□□□□□ -1.8
ARHGEF12-206ENST00000528225 LRP2P98164 4655 aa3.79□□□□□ -1.8
ARHGEF12-206ENST00000528225 CAMK2N1Q7Z7J9 78 aa3.79□□□□□ -1.8
ARHGEF12-206ENST00000528225 KRTAP17-1Q9BYP8 105 aa3.79□□□□□ -1.8
ARHGEF12-206ENST00000528225 RYR1P21817 5038 aa3.72□□□□□ -1.81
ARHGEF12-206ENST00000528225 SEC61BP60468 96 aaKnown RBP3.72□□□□□ -1.81
ARHGEF12-206ENST00000528225 TNP1P09430 55 aa3.67□□□□□ -1.82
ARHGEF12-206ENST00000528225 KRTAP4-1Q9BYQ7 146 aa3.66□□□□□ -1.82
ARHGEF12-206ENST00000528225 MUC17Q685J3 4493 aa3.66□□□□□ -1.82
ARHGEF12-206ENST00000528225 KRTAP23-1A1A580 65 aa3.65□□□□□ -1.83
ARHGEF12-206ENST00000528225 SPRR5A0A1B0GTR4 108 aa3.64□□□□□ -1.83
ARHGEF12-206ENST00000528225 KIAA1109Q2LD37 5005 aa3.61□□□□□ -1.83
ARHGEF12-206ENST00000528225 KRTAP19-2Q3LHN2 52 aa3.61□□□□□ -1.83
ARHGEF12-206ENST00000528225 ABCA13Q86UQ4 5058 aa3.58□□□□□ -1.84
ARHGEF12-206ENST00000528225 RYR3Q15413 4870 aa3.58□□□□□ -1.84
ARHGEF12-206ENST00000528225 LCE2AQ5TA79 106 aaPredicted RBP3.53□□□□□ -1.84
ARHGEF12-206ENST00000528225 KRTAP4-5Q9BYR2 181 aa3.53□□□□□ -1.84
ARHGEF12-206ENST00000528225 LCE2CQ5TA81 110 aa3.52□□□□□ -1.85
ARHGEF12-206ENST00000528225 J3QL48 77 aa3.49□□□□□ -1.85
ARHGEF12-206ENST00000528225 PRO2289Q9P1D8 64 aa3.47□□□□□ -1.85
ARHGEF12-206ENST00000528225 HERC1Q15751 4861 aa3.46□□□□□ -1.86
ARHGEF12-206ENST00000528225 FLGP20930 4061 aaPredicted RBP3.45□□□□□ -1.86
ARHGEF12-206ENST00000528225 LCE3AQ5TA76 89 aa3.43□□□□□ -1.86
ARHGEF12-206ENST00000528225 INE1O15225 51 aa3.41□□□□□ -1.86
ARHGEF12-206ENST00000528225 EPPK1P58107 5090 aaKnown RBP3.4□□□□□ -1.87
ARHGEF12-206ENST00000528225 SPRR2GQ9BYE4 73 aa3.4□□□□□ -1.87
ARHGEF12-206ENST00000528225 KRTAP19-1Q8IUB9 90 aa3.38□□□□□ -1.87
ARHGEF12-206ENST00000528225 KRTAP8-1Q8IUC2 63 aa3.34□□□□□ -1.88
ARHGEF12-206ENST00000528225 MUC2Q02817 5179 aa3.33□□□□□ -1.88
ARHGEF12-206ENST00000528225 PCLOQ9Y6V0 5065 aa3.31□□□□□ -1.88
ARHGEF12-206ENST00000528225 BIRC6Q9NR09 4857 aa3.3□□□□□ -1.88
ARHGEF12-206ENST00000528225 KRTAP9-8Q9BYQ0 159 aa3.29□□□□□ -1.88
ARHGEF12-206ENST00000528225 M0R2T5 61 aa3.29□□□□□ -1.88
ARHGEF12-206ENST00000528225 KRTAP12-3P60328 96 aa3.26□□□□□ -1.89
ARHGEF12-206ENST00000528225 KRTAP10-10P60014 251 aa3.25□□□□□ -1.89
ARHGEF12-206ENST00000528225 KRTAP4-8Q9BYQ9 185 aa3.24□□□□□ -1.89
ARHGEF12-206ENST00000528225 HMCN1Q96RW7 5635 aa3.24□□□□□ -1.89
ARHGEF12-206ENST00000528225 HERC2O95714 4834 aa3.24□□□□□ -1.89
ARHGEF12-206ENST00000528225 MT1FP04733 61 aa3.23□□□□□ -1.89
ARHGEF12-206ENST00000528225 MT2AP02795 61 aa3.22□□□□□ -1.89
ARHGEF12-206ENST00000528225 KRTAP10-12P60413 245 aa3.22□□□□□ -1.89
ARHGEF12-206ENST00000528225 KRTAP19-8Q3LI54 63 aa3.22□□□□□ -1.89
ARHGEF12-206ENST00000528225 KRTAP10-5P60370 271 aa3.21□□□□□ -1.9
ARHGEF12-206ENST00000528225 MT1HP80294 61 aa3.2□□□□□ -1.9
ARHGEF12-206ENST00000528225 MT1XP80297 61 aa3.2□□□□□ -1.9
ARHGEF12-206ENST00000528225 HMCN2Q8NDA2 5059 aa3.17□□□□□ -1.9
ARHGEF12-206ENST00000528225 MT1BP07438 61 aa3.17□□□□□ -1.9
ARHGEF12-206ENST00000528225 KRTAP5-3Q6L8H2 238 aa3.17□□□□□ -1.9
ARHGEF12-206ENST00000528225 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.16□□□□□ -1.9
ARHGEF12-206ENST00000528225 FAT4Q6V0I7 4981 aa3.15□□□□□ -1.91
ARHGEF12-206ENST00000528225 KRTAP9-2Q9BYQ4 174 aa3.15□□□□□ -1.91
ARHGEF12-206ENST00000528225 KRTAP9-6A0A140TA67 174 aa3.14□□□□□ -1.91
ARHGEF12-206ENST00000528225 KRTAP10-7P60409 375 aaPredicted RBP3.14□□□□□ -1.91
ARHGEF12-206ENST00000528225 UBR4Q5T4S7 5183 aa3.12□□□□□ -1.91
ARHGEF12-206ENST00000528225 KRTAP4-8A0A0G2JLE6 195 aa3.11□□□□□ -1.91
ARHGEF12-206ENST00000528225 LCE3CQ5T5A8 94 aa3.08□□□□□ -1.92
ARHGEF12-206ENST00000528225 KRTAP19-5Q3LI72 72 aa3.05□□□□□ -1.92
ARHGEF12-206ENST00000528225 KRTAP4-7Q9BYR0 210 aa3.05□□□□□ -1.92
ARHGEF12-206ENST00000528225 LCE3BQ5TA77 95 aa3.03□□□□□ -1.92
ARHGEF12-206ENST00000528225 RNF213Q63HN8 5207 aa3.02□□□□□ -1.93
ARHGEF12-206ENST00000528225 KRTAP9-3Q9BYQ3 159 aa3.02□□□□□ -1.93
ARHGEF12-206ENST00000528225 KRTAP9-9Q9BYP9 154 aa2.98□□□□□ -1.93
ARHGEF12-206ENST00000528225 KRTAP9-4Q9BYQ2 154 aa2.98□□□□□ -1.93
ARHGEF12-206ENST00000528225 KRTAP9-6A8MVA2 160 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms