RNA–Protein interactions for RNA: ENST00000527805.5

ATM-212, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 4,841 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-212ENST00000527805 LRP1BQ9NZR2 4599 aa7.27□□□□□ -1.25
ATM-212ENST00000527805 FAT1Q14517 4588 aa7.27□□□□□ -1.25
ATM-212ENST00000527805 H0YAA0 97 aa7.26□□□□□ -1.25
ATM-212ENST00000527805 CMYA5Q8N3K9 4069 aa7.21□□□□□ -1.26
ATM-212ENST00000527805 KMT2AQ03164 3969 aa7.2□□□□□ -1.26
ATM-212ENST00000527805 TNP1P09430 55 aa7.18□□□□□ -1.26
ATM-212ENST00000527805 DNAH2Q9P225 4427 aa7.18□□□□□ -1.26
ATM-212ENST00000527805 RYR1P21817 5038 aa7.15□□□□□ -1.27
ATM-212ENST00000527805 KIAA1109Q2LD37 5005 aa7.14□□□□□ -1.27
ATM-212ENST00000527805 DYNC2H1Q8NCM8 4307 aaKnown RBP7.11□□□□□ -1.27
ATM-212ENST00000527805 RYR3Q15413 4870 aa7.07□□□□□ -1.28
ATM-212ENST00000527805 FAT2Q9NYQ8 4349 aa7.06□□□□□ -1.28
ATM-212ENST00000527805 LYSTQ99698 3801 aa7.04□□□□□ -1.28
ATM-212ENST00000527805 PRO2289Q9P1D8 64 aa7□□□□□ -1.29
ATM-212ENST00000527805 SACSQ9NZJ4 4579 aa6.99□□□□□ -1.29
ATM-212ENST00000527805 RYR2Q92736 4967 aa6.97□□□□□ -1.29
ATM-212ENST00000527805 DNAH8Q96JB1 4490 aa6.96□□□□□ -1.3
ATM-212ENST00000527805 KRTAP10-6P60371 365 aaPredicted RBP6.94□□□□□ -1.3
ATM-212ENST00000527805 C10orf95Q9H7T3 257 aa6.94□□□□□ -1.3
ATM-212ENST00000527805 KRTAP17-1Q9BYP8 105 aa6.93□□□□□ -1.3
ATM-212ENST00000527805 KRTAP3-3Q9BYR6 98 aa6.92□□□□□ -1.3
ATM-212ENST00000527805 KRTAP12-2P59991 146 aa6.91□□□□□ -1.3
ATM-212ENST00000527805 APOBP04114 4563 aaKnown RBP6.9□□□□□ -1.3
ATM-212ENST00000527805 DNAH7Q8WXX0 4024 aa6.88□□□□□ -1.31
ATM-212ENST00000527805 VPS13BQ7Z7G8 4022 aa6.87□□□□□ -1.31
ATM-212ENST00000527805 PP632Q6XCG6 107 aa6.87□□□□□ -1.31
ATM-212ENST00000527805 HYDINQ4G0P3 5121 aa6.86□□□□□ -1.31
ATM-212ENST00000527805 KRTAP12-1P59990 96 aa6.86□□□□□ -1.31
ATM-212ENST00000527805 KRTAP13-4Q3LI77 160 aa6.86□□□□□ -1.31
ATM-212ENST00000527805 DNAH6Q9C0G6 4158 aa6.82□□□□□ -1.32
ATM-212ENST00000527805 KRTAP4-1Q9BYQ7 146 aa6.8□□□□□ -1.32
ATM-212ENST00000527805 KRTAP3-2Q9BYR7 98 aa6.8□□□□□ -1.32
ATM-212ENST00000527805 KMT2CQ8NEZ4 4911 aaKnown RBP6.77□□□□□ -1.33
ATM-212ENST00000527805 LRP1Q07954 4544 aaKnown RBP6.77□□□□□ -1.33
ATM-212ENST00000527805 MYCBP2O75592 4640 aa6.76□□□□□ -1.33
ATM-212ENST00000527805 HECTD4Q9Y4D8 3996 aa6.75□□□□□ -1.33
ATM-212ENST00000527805 HERC2O95714 4834 aa6.74□□□□□ -1.33
ATM-212ENST00000527805 BIRC6Q9NR09 4857 aa6.72□□□□□ -1.33
ATM-212ENST00000527805 PKHD1P08F94 4074 aa6.69□□□□□ -1.34
ATM-212ENST00000527805 FAT3Q8TDW7 4589 aa6.63□□□□□ -1.35
ATM-212ENST00000527805 FRAS1Q86XX4 4008 aa6.62□□□□□ -1.35
ATM-212ENST00000527805 HSPG2P98160 4391 aa6.6□□□□□ -1.35
ATM-212ENST00000527805 LORP23490 312 aaPredicted RBP6.57□□□□□ -1.36
ATM-212ENST00000527805 MT1HP80294 61 aa6.55□□□□□ -1.36
ATM-212ENST00000527805 PKD1P98161 4303 aa6.52□□□□□ -1.36
ATM-212ENST00000527805 EPPK1P58107 5090 aaKnown RBP6.46□□□□□ -1.37
ATM-212ENST00000527805 LRP2P98164 4655 aa6.42□□□□□ -1.38
ATM-212ENST00000527805 MT2AP02795 61 aa6.39□□□□□ -1.39
ATM-212ENST00000527805 ABCA13Q86UQ4 5058 aa6.31□□□□□ -1.4
ATM-212ENST00000527805 KRTAP10-12P60413 245 aa6.31□□□□□ -1.4
ATM-212ENST00000527805 MT1FP04733 61 aa6.29□□□□□ -1.4
ATM-212ENST00000527805 PCLOQ9Y6V0 5065 aa6.28□□□□□ -1.4
ATM-212ENST00000527805 HERC1Q15751 4861 aa6.28□□□□□ -1.4
ATM-212ENST00000527805 SPRR2GQ9BYE4 73 aa6.22□□□□□ -1.41
ATM-212ENST00000527805 KRTAP15-1Q3LI76 137 aa6.21□□□□□ -1.42
ATM-212ENST00000527805 LPAP08519 4548 aa6.17□□□□□ -1.42
ATM-212ENST00000527805 TNXBP22105 4242 aa6.1□□□□□ -1.43
ATM-212ENST00000527805 LCE3AQ5TA76 89 aa6.1□□□□□ -1.43
ATM-212ENST00000527805 LCE2CQ5TA81 110 aa6.1□□□□□ -1.43
ATM-212ENST00000527805 KRTAP12-3P60328 96 aa6.08□□□□□ -1.44
ATM-212ENST00000527805 PKHD1L1Q86WI1 4243 aa6.06□□□□□ -1.44
ATM-212ENST00000527805 KRTAP19-1Q8IUB9 90 aa6□□□□□ -1.45
ATM-212ENST00000527805 KRTAP23-1A1A580 65 aa6□□□□□ -1.45
ATM-212ENST00000527805 KRTAP8-1Q8IUC2 63 aa5.99□□□□□ -1.45
ATM-212ENST00000527805 KRTAP9-8Q9BYQ0 159 aa5.99□□□□□ -1.45
ATM-212ENST00000527805 KRTAP19-2Q3LHN2 52 aa5.95□□□□□ -1.46
ATM-212ENST00000527805 KRTAP19-8Q3LI54 63 aa5.91□□□□□ -1.46
ATM-212ENST00000527805 CRCT1Q9UGL9 99 aa5.85□□□□□ -1.47
ATM-212ENST00000527805 KRTAP9-3Q9BYQ3 159 aa5.81□□□□□ -1.48
ATM-212ENST00000527805 RNF213Q63HN8 5207 aa5.81□□□□□ -1.48
ATM-212ENST00000527805 MT1BP07438 61 aa5.79□□□□□ -1.48
ATM-212ENST00000527805 MUC17Q685J3 4493 aa5.78□□□□□ -1.48
ATM-212ENST00000527805 HMCN2Q8NDA2 5059 aa5.78□□□□□ -1.48
ATM-212ENST00000527805 FAT4Q6V0I7 4981 aa5.76□□□□□ -1.49
ATM-212ENST00000527805 UBR4Q5T4S7 5183 aa5.75□□□□□ -1.49
ATM-212ENST00000527805 INE1O15225 51 aa5.75□□□□□ -1.49
ATM-212ENST00000527805 FLGP20930 4061 aaPredicted RBP5.73□□□□□ -1.49
ATM-212ENST00000527805 MT1XP80297 61 aa5.7□□□□□ -1.5
ATM-212ENST00000527805 KRTAP10-5P60370 271 aa5.7□□□□□ -1.5
ATM-212ENST00000527805 SPRR2FQ96RM1 72 aa5.69□□□□□ -1.5
ATM-212ENST00000527805 KRTAP10-7P60409 375 aaPredicted RBP5.68□□□□□ -1.5
ATM-212ENST00000527805 KRTAP19-5Q3LI72 72 aa5.65□□□□□ -1.5
ATM-212ENST00000527805 LCE2BO14633 110 aa5.63□□□□□ -1.51
ATM-212ENST00000527805 MUC2Q02817 5179 aa5.6□□□□□ -1.51
ATM-212ENST00000527805 LCE2AQ5TA79 106 aaPredicted RBP5.6□□□□□ -1.51
ATM-212ENST00000527805 FSIP2Q5CZC0 6907 aa5.57□□□□□ -1.52
ATM-212ENST00000527805 KRTAP4-8A0A0G2JLE6 195 aa5.48□□□□□ -1.53
ATM-212ENST00000527805 KRTAP4-8Q9BYQ9 185 aa5.48□□□□□ -1.53
ATM-212ENST00000527805 KRTAP9-2Q9BYQ4 174 aa5.41□□□□□ -1.54
ATM-212ENST00000527805 LCE3CQ5T5A8 94 aa5.4□□□□□ -1.55
ATM-212ENST00000527805 SPRR2EP22531 72 aa5.34□□□□□ -1.55
ATM-212ENST00000527805 SPRR2BP35325 72 aa5.34□□□□□ -1.55
ATM-212ENST00000527805 SPRR2AP35326 72 aa5.34□□□□□ -1.55
ATM-212ENST00000527805 KRTAP19-6Q3LI70 58 aa5.31□□□□□ -1.56
ATM-212ENST00000527805 KRTAP19-4Q3LI73 84 aa5.31□□□□□ -1.56
ATM-212ENST00000527805 LCE2DQ5TA82 110 aaPredicted RBP5.3□□□□□ -1.56
ATM-212ENST00000527805 MT1GP13640 62 aa5.19□□□□□ -1.58
ATM-212ENST00000527805 SPRR2DP22532 72 aa5.16□□□□□ -1.58
ATM-212ENST00000527805 MT1EP04732 61 aa5.09□□□□□ -1.59
ATM-212ENST00000527805 KRTAP19-3Q7Z4W3 81 aa5.09□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms