RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 PRO2289Q9P1D8 64 aa7.18□□□□□ -1.26
USP47-207ENST00000527733 PP632Q6XCG6 107 aa7.17□□□□□ -1.26
USP47-207ENST00000527733 LRP1BQ9NZR2 4599 aa7.16□□□□□ -1.26
USP47-207ENST00000527733 DNAH3Q8TD57 4116 aa7.15□□□□□ -1.26
USP47-207ENST00000527733 FAT1Q14517 4588 aa7.12□□□□□ -1.27
USP47-207ENST00000527733 DNAH2Q9P225 4427 aa7.11□□□□□ -1.27
USP47-207ENST00000527733 C10orf95Q9H7T3 257 aa7.11□□□□□ -1.27
USP47-207ENST00000527733 KRTAP10-6P60371 365 aaPredicted RBP7.09□□□□□ -1.27
USP47-207ENST00000527733 DNAH7Q8WXX0 4024 aa7.09□□□□□ -1.27
USP47-207ENST00000527733 KRTAP12-2P59991 146 aa7.07□□□□□ -1.28
USP47-207ENST00000527733 KRTAP12-1P59990 96 aa7.04□□□□□ -1.28
USP47-207ENST00000527733 DYNC2H1Q8NCM8 4307 aaKnown RBP7.03□□□□□ -1.28
USP47-207ENST00000527733 KRTAP3-3Q9BYR6 98 aa7.03□□□□□ -1.28
USP47-207ENST00000527733 RYR1P21817 5038 aa7.01□□□□□ -1.29
USP47-207ENST00000527733 FAT2Q9NYQ8 4349 aa6.98□□□□□ -1.29
USP47-207ENST00000527733 KRTAP13-4Q3LI77 160 aa6.98□□□□□ -1.29
USP47-207ENST00000527733 KIAA1109Q2LD37 5005 aa6.98□□□□□ -1.29
USP47-207ENST00000527733 DNAH8Q96JB1 4490 aa6.96□□□□□ -1.3
USP47-207ENST00000527733 KRTAP3-2Q9BYR7 98 aa6.93□□□□□ -1.3
USP47-207ENST00000527733 A0A0A0MQY5 61 aa6.91□□□□□ -1.3
USP47-207ENST00000527733 RYR3Q15413 4870 aa6.9□□□□□ -1.31
USP47-207ENST00000527733 DNAH6Q9C0G6 4158 aa6.9□□□□□ -1.31
USP47-207ENST00000527733 SACSQ9NZJ4 4579 aa6.89□□□□□ -1.31
USP47-207ENST00000527733 FRAS1Q86XX4 4008 aa6.87□□□□□ -1.31
USP47-207ENST00000527733 HYDINQ4G0P3 5121 aa6.85□□□□□ -1.31
USP47-207ENST00000527733 RYR2Q92736 4967 aa6.82□□□□□ -1.32
USP47-207ENST00000527733 VPS13BQ7Z7G8 4022 aa6.8□□□□□ -1.32
USP47-207ENST00000527733 HECTD4Q9Y4D8 3996 aa6.79□□□□□ -1.32
USP47-207ENST00000527733 KRTAP17-1Q9BYP8 105 aa6.78□□□□□ -1.32
USP47-207ENST00000527733 KRTAP4-1Q9BYQ7 146 aa6.78□□□□□ -1.32
USP47-207ENST00000527733 APOBP04114 4563 aaKnown RBP6.76□□□□□ -1.33
USP47-207ENST00000527733 NDUFAF8A1L188 74 aa6.74□□□□□ -1.33
USP47-207ENST00000527733 MYCBP2O75592 4640 aa6.73□□□□□ -1.33
USP47-207ENST00000527733 PKHD1P08F94 4074 aa6.71□□□□□ -1.33
USP47-207ENST00000527733 H3BS24 57 aa6.69□□□□□ -1.34
USP47-207ENST00000527733 LRP1Q07954 4544 aaKnown RBP6.67□□□□□ -1.34
USP47-207ENST00000527733 KMT2CQ8NEZ4 4911 aaKnown RBP6.63□□□□□ -1.35
USP47-207ENST00000527733 LORP23490 312 aaPredicted RBP6.61□□□□□ -1.35
USP47-207ENST00000527733 FAT3Q8TDW7 4589 aa6.6□□□□□ -1.35
USP47-207ENST00000527733 HERC2O95714 4834 aa6.58□□□□□ -1.36
USP47-207ENST00000527733 BIRC6Q9NR09 4857 aa6.57□□□□□ -1.36
USP47-207ENST00000527733 MT1HP80294 61 aa6.56□□□□□ -1.36
USP47-207ENST00000527733 HSPG2P98160 4391 aa6.46□□□□□ -1.38
USP47-207ENST00000527733 KRTAP10-12P60413 245 aa6.44□□□□□ -1.38
USP47-207ENST00000527733 PKD1P98161 4303 aa6.44□□□□□ -1.38
USP47-207ENST00000527733 MT2AP02795 61 aa6.42□□□□□ -1.38
USP47-207ENST00000527733 KRTAP15-1Q3LI76 137 aa6.38□□□□□ -1.39
USP47-207ENST00000527733 SPRR2GQ9BYE4 73 aa6.32□□□□□ -1.4
USP47-207ENST00000527733 LRP2P98164 4655 aa6.31□□□□□ -1.4
USP47-207ENST00000527733 MT1FP04733 61 aa6.3□□□□□ -1.4
USP47-207ENST00000527733 KRTAP23-1A1A580 65 aa6.27□□□□□ -1.41
USP47-207ENST00000527733 EPPK1P58107 5090 aaKnown RBP6.26□□□□□ -1.41
USP47-207ENST00000527733 KRTAP12-3P60328 96 aa6.22□□□□□ -1.41
USP47-207ENST00000527733 LCE3AQ5TA76 89 aa6.21□□□□□ -1.42
USP47-207ENST00000527733 HERC1Q15751 4861 aa6.19□□□□□ -1.42
USP47-207ENST00000527733 PCLOQ9Y6V0 5065 aa6.17□□□□□ -1.42
USP47-207ENST00000527733 LPAP08519 4548 aa6.14□□□□□ -1.43
USP47-207ENST00000527733 ABCA13Q86UQ4 5058 aa6.13□□□□□ -1.43
USP47-207ENST00000527733 LCE2CQ5TA81 110 aa6.07□□□□□ -1.44
USP47-207ENST00000527733 KRTAP8-1Q8IUC2 63 aa6.06□□□□□ -1.44
USP47-207ENST00000527733 KRTAP19-1Q8IUB9 90 aa6.04□□□□□ -1.44
USP47-207ENST00000527733 PKHD1L1Q86WI1 4243 aa6.03□□□□□ -1.44
USP47-207ENST00000527733 TNXBP22105 4242 aa6□□□□□ -1.45
USP47-207ENST00000527733 KRTAP19-8Q3LI54 63 aa6□□□□□ -1.45
USP47-207ENST00000527733 KRTAP9-8Q9BYQ0 159 aa5.98□□□□□ -1.45
USP47-207ENST00000527733 KRTAP19-2Q3LHN2 52 aa5.92□□□□□ -1.46
USP47-207ENST00000527733 CRCT1Q9UGL9 99 aa5.9□□□□□ -1.46
USP47-207ENST00000527733 MT1BP07438 61 aa5.82□□□□□ -1.48
USP47-207ENST00000527733 KRTAP9-3Q9BYQ3 159 aa5.82□□□□□ -1.48
USP47-207ENST00000527733 MUC2Q02817 5179 aa5.82□□□□□ -1.48
USP47-207ENST00000527733 MUC17Q685J3 4493 aa5.77□□□□□ -1.49
USP47-207ENST00000527733 KRTAP10-5P60370 271 aa5.76□□□□□ -1.49
USP47-207ENST00000527733 MT1XP80297 61 aa5.75□□□□□ -1.49
USP47-207ENST00000527733 RNF213Q63HN8 5207 aa5.74□□□□□ -1.49
USP47-207ENST00000527733 KRTAP19-5Q3LI72 72 aa5.73□□□□□ -1.49
USP47-207ENST00000527733 SPRR2FQ96RM1 72 aa5.71□□□□□ -1.49
USP47-207ENST00000527733 KRTAP10-7P60409 375 aaPredicted RBP5.71□□□□□ -1.5
USP47-207ENST00000527733 FLGP20930 4061 aaPredicted RBP5.71□□□□□ -1.5
USP47-207ENST00000527733 HMCN2Q8NDA2 5059 aa5.64□□□□□ -1.51
USP47-207ENST00000527733 FAT4Q6V0I7 4981 aa5.63□□□□□ -1.51
USP47-207ENST00000527733 UBR4Q5T4S7 5183 aa5.63□□□□□ -1.51
USP47-207ENST00000527733 LCE2BO14633 110 aa5.6□□□□□ -1.51
USP47-207ENST00000527733 KRTAP19-4Q3LI73 84 aa5.57□□□□□ -1.52
USP47-207ENST00000527733 LCE2AQ5TA79 106 aaPredicted RBP5.55□□□□□ -1.52
USP47-207ENST00000527733 LCE3CQ5T5A8 94 aa5.53□□□□□ -1.52
USP47-207ENST00000527733 INE1O15225 51 aa5.51□□□□□ -1.53
USP47-207ENST00000527733 FSIP2Q5CZC0 6907 aa5.47□□□□□ -1.53
USP47-207ENST00000527733 KRTAP4-8A0A0G2JLE6 195 aa5.46□□□□□ -1.54
USP47-207ENST00000527733 KRTAP4-8Q9BYQ9 185 aa5.46□□□□□ -1.54
USP47-207ENST00000527733 SPRR2EP22531 72 aa5.36□□□□□ -1.55
USP47-207ENST00000527733 SPRR2BP35325 72 aa5.36□□□□□ -1.55
USP47-207ENST00000527733 SPRR2AP35326 72 aa5.36□□□□□ -1.55
USP47-207ENST00000527733 KRTAP19-6Q3LI70 58 aa5.33□□□□□ -1.56
USP47-207ENST00000527733 KRTAP9-2Q9BYQ4 174 aa5.31□□□□□ -1.56
USP47-207ENST00000527733 LCE2DQ5TA82 110 aaPredicted RBP5.29□□□□□ -1.56
USP47-207ENST00000527733 MT1GP13640 62 aa5.28□□□□□ -1.56
USP47-207ENST00000527733 SPRR2DP22532 72 aa5.18□□□□□ -1.58
USP47-207ENST00000527733 KRTAP19-3Q7Z4W3 81 aa5.15□□□□□ -1.58
USP47-207ENST00000527733 MT1EP04732 61 aa5.15□□□□□ -1.59
USP47-207ENST00000527733 MT1LQ93083 61 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms