RNA–Protein interactions for RNA: ENST00000527497.1

NXF1-205, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-205ENST00000527497 HERC1Q15751 4861 aa1.87□□□□□ -2.11
NXF1-205ENST00000527497 IGIPA6NJ69 53 aa1.86□□□□□ -2.11
NXF1-205ENST00000527497 Q8IZM0 81 aa1.86□□□□□ -2.11
NXF1-205ENST00000527497 PLNP26678 52 aa1.85□□□□□ -2.11
NXF1-205ENST00000527497 TOMM5Q8N4H5 51 aa1.85□□□□□ -2.11
NXF1-205ENST00000527497 DNAH2Q9P225 4427 aa1.84□□□□□ -2.12
NXF1-205ENST00000527497 SRRM2Q9UQ35 2752 aaKnown RBP1.84□□□□□ -2.12
NXF1-205ENST00000527497 DNAH17Q9UFH2 4485 aa1.83□□□□□ -2.12
NXF1-205ENST00000527497 FAT2Q9NYQ8 4349 aa1.83□□□□□ -2.12
NXF1-205ENST00000527497 DYNC1H1Q14204 4646 aaKnown RBP1.83□□□□□ -2.12
NXF1-205ENST00000527497 CRIP1P50238 77 aa1.83□□□□□ -2.12
NXF1-205ENST00000527497 VPS13DQ5THJ4 4388 aa1.83□□□□□ -2.12
NXF1-205ENST00000527497 LYNX1G3V0Z9 82 aa1.82□□□□□ -2.12
NXF1-205ENST00000527497 RPS27LQ71UM5 84 aaKnown RBP1.82□□□□□ -2.12
NXF1-205ENST00000527497 DNAH11Q96DT5 4516 aa1.81□□□□□ -2.12
NXF1-205ENST00000527497 DMBT1Q9UGM3 2413 aaPredicted RBP1.81□□□□□ -2.12
NXF1-205ENST00000527497 MUC2Q02817 5179 aa1.8□□□□□ -2.12
NXF1-205ENST00000527497 PKD1P98161 4303 aa1.8□□□□□ -2.12
NXF1-205ENST00000527497 CDKN2A-AS1Q9UH64 79 aa1.8□□□□□ -2.12
NXF1-205ENST00000527497 HSPG2P98160 4391 aa1.8□□□□□ -2.12
NXF1-205ENST00000527497 APOBP04114 4563 aaKnown RBP1.79□□□□□ -2.12
NXF1-205ENST00000527497 NDUFA3O95167 84 aa1.79□□□□□ -2.12
NXF1-205ENST00000527497 DNAH5Q8TE73 4624 aa1.79□□□□□ -2.12
NXF1-205ENST00000527497 MYCBP2O75592 4640 aa1.78□□□□□ -2.12
NXF1-205ENST00000527497 Q5VSD8 79 aa1.78□□□□□ -2.12
NXF1-205ENST00000527497 LRP1BQ9NZR2 4599 aa1.78□□□□□ -2.13
NXF1-205ENST00000527497 SPRR1AP35321 89 aa1.77□□□□□ -2.13
NXF1-205ENST00000527497 ABRACLQ9P1F3 81 aa1.77□□□□□ -2.13
NXF1-205ENST00000527497 VPS13BQ7Z7G8 4022 aa1.77□□□□□ -2.13
NXF1-205ENST00000527497 RNF213Q63HN8 5207 aa1.76□□□□□ -2.13
NXF1-205ENST00000527497 SMIM27A0A1W2PRY6 76 aa1.76□□□□□ -2.13
NXF1-205ENST00000527497 H0YGX0 51 aa1.76□□□□□ -2.13
NXF1-205ENST00000527497 DEFB108BQ8NET1 73 aa1.76□□□□□ -2.13
NXF1-205ENST00000527497 PRB3Q04118 309 aaPredicted RBP1.75□□□□□ -2.13
NXF1-205ENST00000527497 FSIP2Q5CZC0 6907 aa1.75□□□□□ -2.13
NXF1-205ENST00000527497 APLNQ9ULZ1 77 aa1.73□□□□□ -2.13
NXF1-205ENST00000527497 FAT1Q14517 4588 aa1.73□□□□□ -2.13
NXF1-205ENST00000527497 LINC00158P58513 81 aa1.72□□□□□ -2.13
NXF1-205ENST00000527497 DEFB105AQ8NG35 78 aa1.72□□□□□ -2.13
NXF1-205ENST00000527497 SPRR1BP22528 89 aa1.71□□□□□ -2.14
NXF1-205ENST00000527497 HMCN1Q96RW7 5635 aa1.7□□□□□ -2.14
NXF1-205ENST00000527497 HMCN2Q8NDA2 5059 aa1.7□□□□□ -2.14
NXF1-205ENST00000527497 LINC01546A6NGU7 62 aa1.7□□□□□ -2.14
NXF1-205ENST00000527497 H1FX-AS1Q4G0G2 97 aa1.7□□□□□ -2.14
NXF1-205ENST00000527497 LELP1Q5T871 98 aa1.7□□□□□ -2.14
NXF1-205ENST00000527497 H0YAA0 97 aa1.69□□□□□ -2.14
NXF1-205ENST00000527497 PKHD1L1Q86WI1 4243 aa1.69□□□□□ -2.14
NXF1-205ENST00000527497 FAT3Q8TDW7 4589 aa1.68□□□□□ -2.14
NXF1-205ENST00000527497 H3BUX3 64 aa1.68□□□□□ -2.14
NXF1-205ENST00000527497 TMEM167BQ9NRX6 74 aa1.68□□□□□ -2.14
NXF1-205ENST00000527497 LRP1Q07954 4544 aaKnown RBP1.68□□□□□ -2.14
NXF1-205ENST00000527497 FAT4Q6V0I7 4981 aa1.68□□□□□ -2.14
NXF1-205ENST00000527497 DNAH8Q96JB1 4490 aa1.67□□□□□ -2.14
NXF1-205ENST00000527497 DEFB136Q30KP8 78 aa1.66□□□□□ -2.14
NXF1-205ENST00000527497 WFDC13Q8IUB5 93 aa1.66□□□□□ -2.14
NXF1-205ENST00000527497 LRP2P98164 4655 aa1.65□□□□□ -2.14
NXF1-205ENST00000527497 RPS27P42677 84 aaKnown RBP1.65□□□□□ -2.15
NXF1-205ENST00000527497 SNRPGP62308 76 aaKnown RBP1.64□□□□□ -2.15
NXF1-205ENST00000527497 MINOS1Q5TGZ0 78 aa1.64□□□□□ -2.15
NXF1-205ENST00000527497 TIMM8BQ9Y5J9 83 aaPredicted RBP1.64□□□□□ -2.15
NXF1-205ENST00000527497 KAAG1Q9UBP8 84 aa1.63□□□□□ -2.15
NXF1-205ENST00000527497 TNXBP22105 4242 aa1.63□□□□□ -2.15
NXF1-205ENST00000527497 SPINK4O60575 86 aa1.62□□□□□ -2.15
NXF1-205ENST00000527497 LINC00308Q8TCZ7 52 aa1.62□□□□□ -2.15
NXF1-205ENST00000527497 KLK9Q2XQG4 91 aa1.6□□□□□ -2.15
NXF1-205ENST00000527497 KRTAP5-7Q6L8G8 165 aa1.6□□□□□ -2.15
NXF1-205ENST00000527497 LEAP2Q969E1 77 aa1.6□□□□□ -2.15
NXF1-205ENST00000527497 TTTY10Q9BZA0 68 aa1.6□□□□□ -2.15
NXF1-205ENST00000527497 H3BSH0 61 aa1.59□□□□□ -2.15
NXF1-205ENST00000527497 LINC01590Q5TEZ4 76 aa1.59□□□□□ -2.15
NXF1-205ENST00000527497 C6orf48Q9UBA6 75 aa1.59□□□□□ -2.15
NXF1-205ENST00000527497 IAPPP10997 89 aa1.58□□□□□ -2.16
NXF1-205ENST00000527497 SYNE2Q8WXH0 6885 aaKnown RBP1.58□□□□□ -2.16
NXF1-205ENST00000527497 NEBP20929 6669 aa1.56□□□□□ -2.16
NXF1-205ENST00000527497 GPR98Q8WXG9 6306 aa1.56□□□□□ -2.16
NXF1-205ENST00000527497 DEFB130BP0DP73 79 aa1.55□□□□□ -2.16
NXF1-205ENST00000527497 DEFB130AP0DP74 79 aa1.55□□□□□ -2.16
NXF1-205ENST00000527497 LPAP08519 4548 aa1.55□□□□□ -2.16
NXF1-205ENST00000527497 DEFB135Q30KP9 77 aa1.54□□□□□ -2.16
NXF1-205ENST00000527497 DEFB4AO15263 64 aa1.53□□□□□ -2.16
NXF1-205ENST00000527497 APELAP0DMC3 54 aa1.53□□□□□ -2.16
NXF1-205ENST00000527497 RPL39P5Q59GN2 51 aa1.52□□□□□ -2.17
NXF1-205ENST00000527497 CRCT1Q9UGL9 99 aa1.52□□□□□ -2.17
NXF1-205ENST00000527497 SMIM2Q9BVW6 85 aa1.48□□□□□ -2.17
NXF1-205ENST00000527497 H3BUA1 57 aa1.47□□□□□ -2.17
NXF1-205ENST00000527497 DEFB1P60022 68 aa1.47□□□□□ -2.17
NXF1-205ENST00000527497 SSPOA2VEC9 5147 aa1.47□□□□□ -2.17
NXF1-205ENST00000527497 SMR3BP02814 79 aaPredicted RBP1.46□□□□□ -2.18
NXF1-205ENST00000527497 MACF1Q9UPN3 7388 aaKnown RBP1.46□□□□□ -2.18
NXF1-205ENST00000527497 HTN3P15516 51 aa1.45□□□□□ -2.18
NXF1-205ENST00000527497 WT1-ASQ06250 92 aa1.45□□□□□ -2.18
NXF1-205ENST00000527497 K7EIM0 57 aa1.44□□□□□ -2.18
NXF1-205ENST00000527497 DEFB131AP59861 70 aa1.44□□□□□ -2.18
NXF1-205ENST00000527497 ARHGAP5-AS1Q96IT6 56 aa1.44□□□□□ -2.18
NXF1-205ENST00000527497 MUC17Q685J3 4493 aa1.44□□□□□ -2.18
NXF1-205ENST00000527497 TMEM167AQ8TBQ9 72 aa1.43□□□□□ -2.18
NXF1-205ENST00000527497 RHPN1-AS1Q9BWJ2 59 aa1.43□□□□□ -2.18
NXF1-205ENST00000527497 MT1HL1P0DM35 61 aa1.41□□□□□ -2.18
NXF1-205ENST00000527497 SPINK6Q6UWN8 80 aa1.41□□□□□ -2.18
NXF1-205ENST00000527497 KRTAP19-3Q7Z4W3 81 aa1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms