RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 SPRR2AP35326 72 aa10.24□□□□□ -0.77
USP47-205ENST00000525257 SMIM6P0DI80 62 aa10.23□□□□□ -0.77
USP47-205ENST00000525257 CYP4F30PQ9H0H9 118 aa10.18□□□□□ -0.78
USP47-205ENST00000525257 SPCS1Q9Y6A9 102 aa10.17□□□□□ -0.78
USP47-205ENST00000525257 PRO2289Q9P1D8 64 aa10.1□□□□□ -0.79
USP47-205ENST00000525257 MT1XP80297 61 aa10.07□□□□□ -0.8
USP47-205ENST00000525257 H0YAA0 97 aa10.06□□□□□ -0.8
USP47-205ENST00000525257 KRTAP8-1Q8IUC2 63 aa10.06□□□□□ -0.8
USP47-205ENST00000525257 K7EP34 96 aa10.05□□□□□ -0.8
USP47-205ENST00000525257 A8MUN3 132 aa10.04□□□□□ -0.8
USP47-205ENST00000525257 NDUFC1O43677 76 aa10.04□□□□□ -0.8
USP47-205ENST00000525257 PRO0461Q9UI25 63 aa10.03□□□□□ -0.8
USP47-205ENST00000525257 LOC101927531A0A1B0GV80 90 aa10.02□□□□□ -0.81
USP47-205ENST00000525257 LCE1AQ5T7P2 110 aa10.02□□□□□ -0.81
USP47-205ENST00000525257 TRAV22A0A0B4J277 110 aa10.01□□□□□ -0.81
USP47-205ENST00000525257 KRTAP2-2Q9BYT5 123 aa10.01□□□□□ -0.81
USP47-205ENST00000525257 KRTAP2-1Q9BYU5 128 aa10.01□□□□□ -0.81
USP47-205ENST00000525257 ADM2Q7Z4H4 148 aa10□□□□□ -0.81
USP47-205ENST00000525257 PLAC4Q8WY50 150 aa9.95□□□□□ -0.82
USP47-205ENST00000525257 SPRR2DP22532 72 aa9.91□□□□□ -0.82
USP47-205ENST00000525257 KRTAP12-2P59991 146 aa9.9□□□□□ -0.82
USP47-205ENST00000525257 LOC105371267A0A1B0GV96 52 aa9.84□□□□□ -0.83
USP47-205ENST00000525257 ACYP1P07311 99 aa9.84□□□□□ -0.83
USP47-205ENST00000525257 KRTAP4-8A0A0G2JLE6 195 aa9.82□□□□□ -0.84
USP47-205ENST00000525257 KRTAP4-8Q9BYQ9 185 aa9.82□□□□□ -0.84
USP47-205ENST00000525257 H0Y9P7 68 aa9.8□□□□□ -0.84
USP47-205ENST00000525257 COL5A1-AS1Q5SY13 56 aa9.78□□□□□ -0.84
USP47-205ENST00000525257 R4GN34 69 aa9.78□□□□□ -0.84
USP47-205ENST00000525257 ATOX1O00244 68 aa9.76□□□□□ -0.85
USP47-205ENST00000525257 UQCRQO14949 82 aa9.75□□□□□ -0.85
USP47-205ENST00000525257 ETDBQ3ZM63 59 aa9.73□□□□□ -0.85
USP47-205ENST00000525257 P0C880 135 aa9.7□□□□□ -0.86
USP47-205ENST00000525257 M0QZ58 72 aa9.69□□□□□ -0.86
USP47-205ENST00000525257 LCE3BQ5TA77 95 aa9.67□□□□□ -0.86
USP47-205ENST00000525257 F8W1H4 67 aa9.66□□□□□ -0.86
USP47-205ENST00000525257 HIST1H4AP62805 103 aaKnown RBP9.65□□□□□ -0.86
USP47-205ENST00000525257 GTF2H5Q6ZYL4 71 aa9.65□□□□□ -0.86
USP47-205ENST00000525257 C20orf197Q8N268 126 aa9.64□□□□□ -0.87
USP47-205ENST00000525257 KRTAP10-7P60409 375 aaPredicted RBP9.62□□□□□ -0.87
USP47-205ENST00000525257 LINC01554Q52M75 96 aa9.61□□□□□ -0.87
USP47-205ENST00000525257 LINC00208Q96KT6 92 aa9.6□□□□□ -0.87
USP47-205ENST00000525257 ATP5EP2Q5VTU8 51 aa9.57□□□□□ -0.88
USP47-205ENST00000525257 KRTAP10-12P60413 245 aa9.54□□□□□ -0.88
USP47-205ENST00000525257 MP68P56378 58 aa9.44□□□□□ -0.9
USP47-205ENST00000525257 FAM240AA0A1B0GVK7 77 aa9.42□□□□□ -0.9
USP47-205ENST00000525257 OCR1Q9BZK8 76 aa9.37□□□□□ -0.91
USP47-205ENST00000525257 GPR98Q8WXG9 6306 aa9.37□□□□□ -0.91
USP47-205ENST00000525257 PCP4L1A6NKN8 68 aa9.35□□□□□ -0.91
USP47-205ENST00000525257 DMAC1Q96GE9 116 aa9.35□□□□□ -0.91
USP47-205ENST00000525257 MT-ATP8P03928 68 aa9.28□□□□□ -0.92
USP47-205ENST00000525257 LINC00643Q86TS7 51 aa9.27□□□□□ -0.93
USP47-205ENST00000525257 DSTQ03001 7570 aaKnown RBP9.25□□□□□ -0.93
USP47-205ENST00000525257 H3BPC8 53 aa9.2□□□□□ -0.94
USP47-205ENST00000525257 KRTAP4-9Q9BYQ8 210 aa9.16□□□□□ -0.94
USP47-205ENST00000525257 TRAV7A0A075B6U4 112 aa9.12□□□□□ -0.95
USP47-205ENST00000525257 LCE5AQ5TCM9 118 aa9.07□□□□□ -0.96
USP47-205ENST00000525257 LOC100996750A0A140TA64 210 aa9.06□□□□□ -0.96
USP47-205ENST00000525257 KRTAP4-6Q9BYQ5 205 aa9.06□□□□□ -0.96
USP47-205ENST00000525257 ACYP2P14621 99 aa9.01□□□□□ -0.97
USP47-205ENST00000525257 KRTAP19-7Q3SYF9 63 aa9.01□□□□□ -0.97
USP47-205ENST00000525257 SPTSSBQ8NFR3 76 aa9.01□□□□□ -0.97
USP47-205ENST00000525257 KRTAP19-3Q7Z4W3 81 aa8.98□□□□□ -0.97
USP47-205ENST00000525257 SCGB1A1P11684 91 aa8.97□□□□□ -0.97
USP47-205ENST00000525257 MT1EP04732 61 aa8.96□□□□□ -0.98
USP47-205ENST00000525257 CAMK2N1Q7Z7J9 78 aa8.92□□□□□ -0.98
USP47-205ENST00000525257 CHKB-CPT1BH3BT56 60 aa8.87□□□□□ -0.99
USP47-205ENST00000525257 LCE1DQ5T752 114 aa8.87□□□□□ -0.99
USP47-205ENST00000525257 KRTAP13-4Q3LI77 160 aa8.86□□□□□ -0.99
USP47-205ENST00000525257 A0A1B0GV90 55 aa8.84□□□□□ -0.99
USP47-205ENST00000525257 CYSTM1Q9H1C7 97 aa8.82□□□□□ -1
USP47-205ENST00000525257 HMCN1Q96RW7 5635 aa8.78□□□□□ -1
USP47-205ENST00000525257 MT4P47944 62 aa8.72□□□□□ -1.01
USP47-205ENST00000525257 MT1GP13640 62 aa8.69□□□□□ -1.02
USP47-205ENST00000525257 LCE4AQ5TA78 99 aa8.69□□□□□ -1.02
USP47-205ENST00000525257 KRTAP19-5Q3LI72 72 aa8.66□□□□□ -1.02
USP47-205ENST00000525257 A0A0D9SG42 100 aa8.65□□□□□ -1.02
USP47-205ENST00000525257 AHNAK2Q8IVF2 5795 aa8.65□□□□□ -1.03
USP47-205ENST00000525257 J3QR89 54 aa8.63□□□□□ -1.03
USP47-205ENST00000525257 PP632Q6XCG6 107 aa8.63□□□□□ -1.03
USP47-205ENST00000525257 MT1MQ8N339 61 aa8.57□□□□□ -1.04
USP47-205ENST00000525257 SMIM20Q8N5G0 67 aa8.55□□□□□ -1.04
USP47-205ENST00000525257 SNURFQ9Y675 71 aa8.54□□□□□ -1.04
USP47-205ENST00000525257 MT1LQ93083 61 aa8.48□□□□□ -1.05
USP47-205ENST00000525257 KRTAP5-10Q6L8G5 202 aa8.47□□□□□ -1.05
USP47-205ENST00000525257 SPINT4Q6UDR6 99 aa8.45□□□□□ -1.06
USP47-205ENST00000525257 SPANXA2-OT1Q8N9U9 137 aa8.45□□□□□ -1.06
USP47-205ENST00000525257 KRTAP5-4Q6L8H1 288 aa8.43□□□□□ -1.06
USP47-205ENST00000525257 KRTAP4-3Q9BYR4 195 aa8.42□□□□□ -1.06
USP47-205ENST00000525257 K7ERU9 68 aa8.41□□□□□ -1.06
USP47-205ENST00000525257 SPATA8Q6RVD6 105 aa8.41□□□□□ -1.06
USP47-205ENST00000525257 KRTAP12-1P59990 96 aa8.33□□□□□ -1.08
USP47-205ENST00000525257 SEC61GP60059 68 aa8.33□□□□□ -1.08
USP47-205ENST00000525257 SERP1Q9Y6X1 66 aa8.33□□□□□ -1.08
USP47-205ENST00000525257 COA5Q86WW8 74 aa8.29□□□□□ -1.08
USP47-205ENST00000525257 C10orf95Q9H7T3 257 aa8.26□□□□□ -1.09
USP47-205ENST00000525257 A0A1B0GU33 70 aa8.25□□□□□ -1.09
USP47-205ENST00000525257 LCE3AQ5TA76 89 aa8.23□□□□□ -1.09
USP47-205ENST00000525257 KRTAP5-7Q6L8G8 165 aa8.19□□□□□ -1.1
USP47-205ENST00000525257 KRTAP5-3Q6L8H2 238 aa8.17□□□□□ -1.1
USP47-205ENST00000525257 KRTAP4-12Q9BQ66 201 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms