RNA–Protein interactions for RNA: ENST00000524794.5

NFRKB-203, Transcript of nuclear factor related to kappaB binding protein, humanhuman

TSL 1 (best) BASIC

Gene NFRKB, Length 4,351 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFRKB-203ENST00000524794 DNAH11Q96DT5 4516 aa4.16□□□□□ -1.74
NFRKB-203ENST00000524794 DNAH5Q8TE73 4624 aa4.16□□□□□ -1.74
NFRKB-203ENST00000524794 DYNC2H1Q8NCM8 4307 aaKnown RBP4.15□□□□□ -1.75
NFRKB-203ENST00000524794 VPS13DQ5THJ4 4388 aa4.13□□□□□ -1.75
NFRKB-203ENST00000524794 DNAH17Q9UFH2 4485 aa4.1□□□□□ -1.75
NFRKB-203ENST00000524794 KRTAP10-4P60372 401 aaPredicted RBP4.1□□□□□ -1.75
NFRKB-203ENST00000524794 MT1HL1P0DM35 61 aa4.09□□□□□ -1.75
NFRKB-203ENST00000524794 FAT1Q14517 4588 aa4.09□□□□□ -1.75
NFRKB-203ENST00000524794 KRTAP12-1P59990 96 aa4.08□□□□□ -1.76
NFRKB-203ENST00000524794 LCE2CQ5TA81 110 aa4.08□□□□□ -1.76
NFRKB-203ENST00000524794 KRTAP13-4Q3LI77 160 aa4.07□□□□□ -1.76
NFRKB-203ENST00000524794 KMT2AQ03164 3969 aa4.07□□□□□ -1.76
NFRKB-203ENST00000524794 KRTAP3-1Q9BYR8 98 aa4.07□□□□□ -1.76
NFRKB-203ENST00000524794 DNAH8Q96JB1 4490 aa4.04□□□□□ -1.76
NFRKB-203ENST00000524794 LYSTQ99698 3801 aa4.04□□□□□ -1.76
NFRKB-203ENST00000524794 DYNC1H1Q14204 4646 aaKnown RBP4.02□□□□□ -1.77
NFRKB-203ENST00000524794 KIAA1109Q2LD37 5005 aa4.02□□□□□ -1.77
NFRKB-203ENST00000524794 KRTAP10-6P60371 365 aaPredicted RBP4.01□□□□□ -1.77
NFRKB-203ENST00000524794 LRP1BQ9NZR2 4599 aa4.01□□□□□ -1.77
NFRKB-203ENST00000524794 ALMS1Q8TCU4 4167 aa4□□□□□ -1.77
NFRKB-203ENST00000524794 RYR1P21817 5038 aa3.99□□□□□ -1.77
NFRKB-203ENST00000524794 DNAH2Q9P225 4427 aa3.98□□□□□ -1.77
NFRKB-203ENST00000524794 LCE2AQ5TA79 106 aaPredicted RBP3.97□□□□□ -1.77
NFRKB-203ENST00000524794 DNAH7Q8WXX0 4024 aa3.96□□□□□ -1.78
NFRKB-203ENST00000524794 HECTD4Q9Y4D8 3996 aa3.95□□□□□ -1.78
NFRKB-203ENST00000524794 DNAH6Q9C0G6 4158 aa3.95□□□□□ -1.78
NFRKB-203ENST00000524794 RYR3Q15413 4870 aa3.95□□□□□ -1.78
NFRKB-203ENST00000524794 KRTAP10-10P60014 251 aa3.95□□□□□ -1.78
NFRKB-203ENST00000524794 PRO2289Q9P1D8 64 aa3.94□□□□□ -1.78
NFRKB-203ENST00000524794 FRAS1Q86XX4 4008 aa3.9□□□□□ -1.79
NFRKB-203ENST00000524794 LORP23490 312 aaPredicted RBP3.88□□□□□ -1.79
NFRKB-203ENST00000524794 MYCBP2O75592 4640 aa3.88□□□□□ -1.79
NFRKB-203ENST00000524794 SACSQ9NZJ4 4579 aa3.87□□□□□ -1.79
NFRKB-203ENST00000524794 HYDINQ4G0P3 5121 aa3.87□□□□□ -1.79
NFRKB-203ENST00000524794 INE1O15225 51 aa3.87□□□□□ -1.79
NFRKB-203ENST00000524794 KMT2CQ8NEZ4 4911 aaKnown RBP3.87□□□□□ -1.79
NFRKB-203ENST00000524794 VPS13BQ7Z7G8 4022 aa3.86□□□□□ -1.79
NFRKB-203ENST00000524794 APOBP04114 4563 aaKnown RBP3.85□□□□□ -1.79
NFRKB-203ENST00000524794 FAT2Q9NYQ8 4349 aa3.84□□□□□ -1.79
NFRKB-203ENST00000524794 KRTAP17-1Q9BYP8 105 aa3.84□□□□□ -1.8
NFRKB-203ENST00000524794 LRP1Q07954 4544 aaKnown RBP3.83□□□□□ -1.8
NFRKB-203ENST00000524794 FAT3Q8TDW7 4589 aa3.83□□□□□ -1.8
NFRKB-203ENST00000524794 RYR2Q92736 4967 aa3.81□□□□□ -1.8
NFRKB-203ENST00000524794 PKHD1P08F94 4074 aa3.8□□□□□ -1.8
NFRKB-203ENST00000524794 HERC2O95714 4834 aa3.76□□□□□ -1.81
NFRKB-203ENST00000524794 PKD1P98161 4303 aa3.75□□□□□ -1.81
NFRKB-203ENST00000524794 KRTAP4-1Q9BYQ7 146 aa3.69□□□□□ -1.82
NFRKB-203ENST00000524794 EPPK1P58107 5090 aaKnown RBP3.66□□□□□ -1.82
NFRKB-203ENST00000524794 PKHD1L1Q86WI1 4243 aa3.66□□□□□ -1.82
NFRKB-203ENST00000524794 LRP2P98164 4655 aa3.65□□□□□ -1.83
NFRKB-203ENST00000524794 HSPG2P98160 4391 aa3.64□□□□□ -1.83
NFRKB-203ENST00000524794 BIRC6Q9NR09 4857 aa3.63□□□□□ -1.83
NFRKB-203ENST00000524794 ABCA13Q86UQ4 5058 aa3.53□□□□□ -1.84
NFRKB-203ENST00000524794 PCLOQ9Y6V0 5065 aa3.51□□□□□ -1.85
NFRKB-203ENST00000524794 LPAP08519 4548 aa3.5□□□□□ -1.85
NFRKB-203ENST00000524794 MT1HP80294 61 aa3.5□□□□□ -1.85
NFRKB-203ENST00000524794 TNXBP22105 4242 aa3.49□□□□□ -1.85
NFRKB-203ENST00000524794 KRTAP23-1A1A580 65 aa3.48□□□□□ -1.85
NFRKB-203ENST00000524794 HERC1Q15751 4861 aa3.43□□□□□ -1.86
NFRKB-203ENST00000524794 LCE3AQ5TA76 89 aa3.42□□□□□ -1.86
NFRKB-203ENST00000524794 MT2AP02795 61 aa3.41□□□□□ -1.86
NFRKB-203ENST00000524794 KRTAP12-3P60328 96 aa3.4□□□□□ -1.87
NFRKB-203ENST00000524794 MT1FP04733 61 aa3.38□□□□□ -1.87
NFRKB-203ENST00000524794 RNF213Q63HN8 5207 aa3.36□□□□□ -1.87
NFRKB-203ENST00000524794 KRTAP10-12P60413 245 aa3.35□□□□□ -1.87
NFRKB-203ENST00000524794 MUC2Q02817 5179 aa3.32□□□□□ -1.88
NFRKB-203ENST00000524794 UBR4Q5T4S7 5183 aa3.32□□□□□ -1.88
NFRKB-203ENST00000524794 FSIP2Q5CZC0 6907 aa3.3□□□□□ -1.88
NFRKB-203ENST00000524794 SPRR2GQ9BYE4 73 aa3.28□□□□□ -1.88
NFRKB-203ENST00000524794 FAT4Q6V0I7 4981 aa3.24□□□□□ -1.89
NFRKB-203ENST00000524794 KRTAP19-1Q8IUB9 90 aa3.23□□□□□ -1.89
NFRKB-203ENST00000524794 SPRR5A0A1B0GTR4 108 aa3.22□□□□□ -1.89
NFRKB-203ENST00000524794 KRTAP9-8Q9BYQ0 159 aa3.22□□□□□ -1.89
NFRKB-203ENST00000524794 KRTAP19-2Q3LHN2 52 aa3.21□□□□□ -1.9
NFRKB-203ENST00000524794 CRCT1Q9UGL9 99 aa3.2□□□□□ -1.9
NFRKB-203ENST00000524794 HMCN2Q8NDA2 5059 aa3.2□□□□□ -1.9
NFRKB-203ENST00000524794 KRTAP10-5P60370 271 aa3.19□□□□□ -1.9
NFRKB-203ENST00000524794 KRTAP8-1Q8IUC2 63 aa3.17□□□□□ -1.9
NFRKB-203ENST00000524794 MUC17Q685J3 4493 aa3.16□□□□□ -1.9
NFRKB-203ENST00000524794 FLGP20930 4061 aaPredicted RBP3.11□□□□□ -1.91
NFRKB-203ENST00000524794 KRTAP9-3Q9BYQ3 159 aa3.11□□□□□ -1.91
NFRKB-203ENST00000524794 KRTAP19-8Q3LI54 63 aa3.11□□□□□ -1.91
NFRKB-203ENST00000524794 MT1BP07438 61 aa3.1□□□□□ -1.91
NFRKB-203ENST00000524794 KRTAP10-7P60409 375 aaPredicted RBP3.07□□□□□ -1.92
NFRKB-203ENST00000524794 MT1XP80297 61 aa3.05□□□□□ -1.92
NFRKB-203ENST00000524794 SPRR2FQ96RM1 72 aa3.05□□□□□ -1.92
NFRKB-203ENST00000524794 LOC100996750A0A140TA64 210 aa3.02□□□□□ -1.93
NFRKB-203ENST00000524794 KRTAP4-6Q9BYQ5 205 aa3.02□□□□□ -1.93
NFRKB-203ENST00000524794 KRTAP19-5Q3LI72 72 aa3.02□□□□□ -1.93
NFRKB-203ENST00000524794 LCE3CQ5T5A8 94 aa3.01□□□□□ -1.93
NFRKB-203ENST00000524794 KRTAP4-8A0A0G2JLE6 195 aa3□□□□□ -1.93
NFRKB-203ENST00000524794 KRTAP4-8Q9BYQ9 185 aa3□□□□□ -1.93
NFRKB-203ENST00000524794 KRTAP12-4P60329 112 aa2.95□□□□□ -1.94
NFRKB-203ENST00000524794 LCE4AQ5TA78 99 aa2.93□□□□□ -1.94
NFRKB-203ENST00000524794 KRTAP9-2Q9BYQ4 174 aa2.92□□□□□ -1.94
NFRKB-203ENST00000524794 USH2AO75445 5202 aa2.9□□□□□ -1.95
NFRKB-203ENST00000524794 KRTAP19-4Q3LI73 84 aa2.89□□□□□ -1.95
NFRKB-203ENST00000524794 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.88□□□□□ -1.95
NFRKB-203ENST00000524794 KRTAP4-12Q9BQ66 201 aa2.87□□□□□ -1.95
NFRKB-203ENST00000524794 KRTAP9-6A0A140TA67 174 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms