RNA–Protein interactions for RNA: ENST00000524657.1

KDM2A-204, Transcript of lysine demethylase 2A, humanhuman

TSL 1 (best)

Gene KDM2A, Length 3,692 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-204ENST00000524657 FAT2Q9NYQ8 4349 aa5.05□□□□□ -1.6
KDM2A-204ENST00000524657 S4R3F8 94 aa5.04□□□□□ -1.6
KDM2A-204ENST00000524657 KRTAP12-2P59991 146 aa5.03□□□□□ -1.6
KDM2A-204ENST00000524657 KRTAP21-3Q3LHN1 58 aa5.01□□□□□ -1.61
KDM2A-204ENST00000524657 FAT1Q14517 4588 aa4.97□□□□□ -1.61
KDM2A-204ENST00000524657 MYCBP2O75592 4640 aa4.96□□□□□ -1.61
KDM2A-204ENST00000524657 SEC61BP60468 96 aaKnown RBP4.96□□□□□ -1.62
KDM2A-204ENST00000524657 KRTAP10-8P60410 259 aa4.93□□□□□ -1.62
KDM2A-204ENST00000524657 HYDINQ4G0P3 5121 aa4.92□□□□□ -1.62
KDM2A-204ENST00000524657 LCE2DQ5TA82 110 aaPredicted RBP4.92□□□□□ -1.62
KDM2A-204ENST00000524657 KRTAP12-1P59990 96 aa4.91□□□□□ -1.62
KDM2A-204ENST00000524657 LUZP6Q538Z0 58 aa4.91□□□□□ -1.62
KDM2A-204ENST00000524657 RPS29P62273 56 aaKnown RBP4.91□□□□□ -1.62
KDM2A-204ENST00000524657 PKHD1P08F94 4074 aa4.91□□□□□ -1.62
KDM2A-204ENST00000524657 PKD1P98161 4303 aa4.88□□□□□ -1.63
KDM2A-204ENST00000524657 DYNC1H1Q14204 4646 aaKnown RBP4.86□□□□□ -1.63
KDM2A-204ENST00000524657 FAT3Q8TDW7 4589 aa4.85□□□□□ -1.63
KDM2A-204ENST00000524657 XP32Q5T750 250 aa4.85□□□□□ -1.63
KDM2A-204ENST00000524657 SACSQ9NZJ4 4579 aa4.84□□□□□ -1.63
KDM2A-204ENST00000524657 APOBP04114 4563 aaKnown RBP4.83□□□□□ -1.64
KDM2A-204ENST00000524657 Q5VSD8 79 aa4.82□□□□□ -1.64
KDM2A-204ENST00000524657 HSPG2P98160 4391 aa4.81□□□□□ -1.64
KDM2A-204ENST00000524657 PLAC4Q8WY50 150 aa4.81□□□□□ -1.64
KDM2A-204ENST00000524657 CAMK2N1Q7Z7J9 78 aa4.79□□□□□ -1.64
KDM2A-204ENST00000524657 LRP1Q07954 4544 aaKnown RBP4.79□□□□□ -1.64
KDM2A-204ENST00000524657 M0QZ58 72 aa4.77□□□□□ -1.65
KDM2A-204ENST00000524657 RYR3Q15413 4870 aa4.77□□□□□ -1.65
KDM2A-204ENST00000524657 R4GN34 69 aa4.77□□□□□ -1.65
KDM2A-204ENST00000524657 KMT2CQ8NEZ4 4911 aaKnown RBP4.75□□□□□ -1.65
KDM2A-204ENST00000524657 M0R2T5 61 aa4.7□□□□□ -1.66
KDM2A-204ENST00000524657 A0A1B0GVY2 172 aa4.69□□□□□ -1.66
KDM2A-204ENST00000524657 LPAP08519 4548 aa4.69□□□□□ -1.66
KDM2A-204ENST00000524657 PKHD1L1Q86WI1 4243 aa4.68□□□□□ -1.66
KDM2A-204ENST00000524657 KRTAP10-4P60372 401 aaPredicted RBP4.67□□□□□ -1.66
KDM2A-204ENST00000524657 LCE2CQ5TA81 110 aa4.64□□□□□ -1.67
KDM2A-204ENST00000524657 RYR2Q92736 4967 aa4.63□□□□□ -1.67
KDM2A-204ENST00000524657 LRP2P98164 4655 aa4.61□□□□□ -1.67
KDM2A-204ENST00000524657 LORP23490 312 aaPredicted RBP4.58□□□□□ -1.68
KDM2A-204ENST00000524657 LCE2BO14633 110 aa4.56□□□□□ -1.68
KDM2A-204ENST00000524657 KIAA1109Q2LD37 5005 aa4.54□□□□□ -1.68
KDM2A-204ENST00000524657 LCE2AQ5TA79 106 aaPredicted RBP4.53□□□□□ -1.68
KDM2A-204ENST00000524657 EPPK1P58107 5090 aaKnown RBP4.53□□□□□ -1.68
KDM2A-204ENST00000524657 RYR1P21817 5038 aa4.53□□□□□ -1.68
KDM2A-204ENST00000524657 KRTAP23-1A1A580 65 aa4.52□□□□□ -1.69
KDM2A-204ENST00000524657 TNXBP22105 4242 aa4.52□□□□□ -1.69
KDM2A-204ENST00000524657 OBSCNQ5VST9 7968 aa4.49□□□□□ -1.69
KDM2A-204ENST00000524657 PP632Q6XCG6 107 aa4.43□□□□□ -1.7
KDM2A-204ENST00000524657 MUC2Q02817 5179 aa4.39□□□□□ -1.71
KDM2A-204ENST00000524657 BIRC6Q9NR09 4857 aa4.38□□□□□ -1.71
KDM2A-204ENST00000524657 KRTAP4-5Q9BYR2 181 aa4.38□□□□□ -1.71
KDM2A-204ENST00000524657 KRTAP17-1Q9BYP8 105 aa4.35□□□□□ -1.71
KDM2A-204ENST00000524657 MT1HL1P0DM35 61 aa4.34□□□□□ -1.71
KDM2A-204ENST00000524657 HERC2O95714 4834 aa4.33□□□□□ -1.72
KDM2A-204ENST00000524657 FSIP2Q5CZC0 6907 aa4.33□□□□□ -1.72
KDM2A-204ENST00000524657 TNP1P09430 55 aa4.32□□□□□ -1.72
KDM2A-204ENST00000524657 PCLOQ9Y6V0 5065 aa4.32□□□□□ -1.72
KDM2A-204ENST00000524657 ABCA13Q86UQ4 5058 aa4.27□□□□□ -1.73
KDM2A-204ENST00000524657 RNF213Q63HN8 5207 aa4.24□□□□□ -1.73
KDM2A-204ENST00000524657 KRTAP4-1Q9BYQ7 146 aa4.23□□□□□ -1.73
KDM2A-204ENST00000524657 SPRR5A0A1B0GTR4 108 aa4.19□□□□□ -1.74
KDM2A-204ENST00000524657 PRO2289Q9P1D8 64 aa4.18□□□□□ -1.74
KDM2A-204ENST00000524657 KRTAP10-10P60014 251 aa4.17□□□□□ -1.74
KDM2A-204ENST00000524657 FAT4Q6V0I7 4981 aa4.17□□□□□ -1.74
KDM2A-204ENST00000524657 SYNE1Q8NF91 8797 aaKnown RBP4.15□□□□□ -1.74
KDM2A-204ENST00000524657 MUC17Q685J3 4493 aa4.14□□□□□ -1.75
KDM2A-204ENST00000524657 UBR4Q5T4S7 5183 aa4.11□□□□□ -1.75
KDM2A-204ENST00000524657 LCE3AQ5TA76 89 aa4.08□□□□□ -1.76
KDM2A-204ENST00000524657 KRTAP19-2Q3LHN2 52 aa4.02□□□□□ -1.77
KDM2A-204ENST00000524657 HMCN2Q8NDA2 5059 aa4.01□□□□□ -1.77
KDM2A-204ENST00000524657 INE1O15225 51 aa4.01□□□□□ -1.77
KDM2A-204ENST00000524657 HERC1Q15751 4861 aa4□□□□□ -1.77
KDM2A-204ENST00000524657 FLGP20930 4061 aaPredicted RBP3.96□□□□□ -1.77
KDM2A-204ENST00000524657 DSTQ03001 7570 aaKnown RBP3.93□□□□□ -1.78
KDM2A-204ENST00000524657 CRCT1Q9UGL9 99 aa3.91□□□□□ -1.78
KDM2A-204ENST00000524657 USH2AO75445 5202 aa3.89□□□□□ -1.79
KDM2A-204ENST00000524657 KRTAP19-1Q8IUB9 90 aa3.86□□□□□ -1.79
KDM2A-204ENST00000524657 KRTAP12-3P60328 96 aa3.84□□□□□ -1.79
KDM2A-204ENST00000524657 KRTAP8-1Q8IUC2 63 aa3.82□□□□□ -1.8
KDM2A-204ENST00000524657 SPRR2GQ9BYE4 73 aa3.82□□□□□ -1.8
KDM2A-204ENST00000524657 KMT2DO14686 5537 aa3.81□□□□□ -1.8
KDM2A-204ENST00000524657 FCGBPQ9Y6R7 5405 aaPredicted RBP3.79□□□□□ -1.8
KDM2A-204ENST00000524657 KRTAP10-12P60413 245 aa3.76□□□□□ -1.81
KDM2A-204ENST00000524657 MT1FP04733 61 aa3.71□□□□□ -1.82
KDM2A-204ENST00000524657 KRTAP10-7P60409 375 aaPredicted RBP3.69□□□□□ -1.82
KDM2A-204ENST00000524657 KRTAP10-5P60370 271 aa3.68□□□□□ -1.82
KDM2A-204ENST00000524657 MT1XP80297 61 aa3.67□□□□□ -1.82
KDM2A-204ENST00000524657 MT2AP02795 61 aa3.66□□□□□ -1.82
KDM2A-204ENST00000524657 MT1HP80294 61 aa3.62□□□□□ -1.83
KDM2A-204ENST00000524657 MT1BP07438 61 aa3.6□□□□□ -1.83
KDM2A-204ENST00000524657 KRTAP19-5Q3LI72 72 aa3.59□□□□□ -1.84
KDM2A-204ENST00000524657 LCE3CQ5T5A8 94 aa3.58□□□□□ -1.84
KDM2A-204ENST00000524657 KRTAP9-8Q9BYQ0 159 aa3.56□□□□□ -1.84
KDM2A-204ENST00000524657 KRTAP9-6A8MVA2 160 aa3.55□□□□□ -1.84
KDM2A-204ENST00000524657 KRTAP19-8Q3LI54 63 aa3.55□□□□□ -1.84
KDM2A-204ENST00000524657 KRTAP4-8A0A0G2JLE6 195 aa3.52□□□□□ -1.85
KDM2A-204ENST00000524657 KRTAP4-8Q9BYQ9 185 aa3.52□□□□□ -1.85
KDM2A-204ENST00000524657 KRTAP4-7Q9BYR0 210 aa3.52□□□□□ -1.85
KDM2A-204ENST00000524657 SYNE2Q8WXH0 6885 aaKnown RBP3.51□□□□□ -1.85
KDM2A-204ENST00000524657 MUC12Q9UKN1 5478 aa3.4□□□□□ -1.87
KDM2A-204ENST00000524657 KRTAP2-3P0C7H8 128 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms