RNA–Protein interactions for RNA: ENST00000524596.1

LIN7C-202, Transcript of lin-7 homolog C, crumbs cell polarity complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN7C, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7C-202ENST00000524596 VPS13CQ709C8 3753 aa2.91□□□□□ -1.94
LIN7C-202ENST00000524596 ALMS1Q8TCU4 4167 aa2.9□□□□□ -1.94
LIN7C-202ENST00000524596 PCLOQ9Y6V0 5065 aa2.9□□□□□ -1.94
LIN7C-202ENST00000524596 LCE2AQ5TA79 106 aaPredicted RBP2.9□□□□□ -1.95
LIN7C-202ENST00000524596 TENM1Q9UKZ4 2725 aa2.9□□□□□ -1.95
LIN7C-202ENST00000524596 MT3P25713 68 aa2.89□□□□□ -1.95
LIN7C-202ENST00000524596 VWFP04275 2813 aa2.89□□□□□ -1.95
LIN7C-202ENST00000524596 A0A1B0GVY2 172 aa2.88□□□□□ -1.95
LIN7C-202ENST00000524596 HYDINQ4G0P3 5121 aa2.87□□□□□ -1.95
LIN7C-202ENST00000524596 KRTAP1-4P0C5Y4 121 aa2.86□□□□□ -1.95
LIN7C-202ENST00000524596 SACSQ9NZJ4 4579 aa2.86□□□□□ -1.95
LIN7C-202ENST00000524596 HUWE1Q7Z6Z7 4374 aaKnown RBP2.85□□□□□ -1.95
LIN7C-202ENST00000524596 SVEP1Q4LDE5 3571 aa2.85□□□□□ -1.95
LIN7C-202ENST00000524596 TENM2Q9NT68 2774 aa2.85□□□□□ -1.95
LIN7C-202ENST00000524596 DNAH7Q8WXX0 4024 aa2.85□□□□□ -1.95
LIN7C-202ENST00000524596 HECTD4Q9Y4D8 3996 aa2.84□□□□□ -1.95
LIN7C-202ENST00000524596 SMR3BP02814 79 aaPredicted RBP2.83□□□□□ -1.96
LIN7C-202ENST00000524596 KMT2AQ03164 3969 aa2.83□□□□□ -1.96
LIN7C-202ENST00000524596 DNAH9Q9NYC9 4486 aa2.83□□□□□ -1.96
LIN7C-202ENST00000524596 PKHD1P08F94 4074 aa2.82□□□□□ -1.96
LIN7C-202ENST00000524596 LORP23490 312 aaPredicted RBP2.8□□□□□ -1.96
LIN7C-202ENST00000524596 TENM3Q9P273 2699 aa2.8□□□□□ -1.96
LIN7C-202ENST00000524596 FRAS1Q86XX4 4008 aa2.79□□□□□ -1.96
LIN7C-202ENST00000524596 KRTAP10-2P60368 255 aa2.78□□□□□ -1.96
LIN7C-202ENST00000524596 LYSTQ99698 3801 aa2.76□□□□□ -1.97
LIN7C-202ENST00000524596 KRTAP10-1P60331 282 aa2.76□□□□□ -1.97
LIN7C-202ENST00000524596 KRTAP10-10P60014 251 aa2.76□□□□□ -1.97
LIN7C-202ENST00000524596 RYR1P21817 5038 aa2.74□□□□□ -1.97
LIN7C-202ENST00000524596 PKHD1L1Q86WI1 4243 aa2.73□□□□□ -1.97
LIN7C-202ENST00000524596 COL7A1Q02388 2944 aa2.73□□□□□ -1.97
LIN7C-202ENST00000524596 KRTAP12-3P60328 96 aa2.71□□□□□ -1.98
LIN7C-202ENST00000524596 DNAH10Q8IVF4 4471 aa2.7□□□□□ -1.98
LIN7C-202ENST00000524596 PLECQ15149 4684 aaKnown RBP2.7□□□□□ -1.98
LIN7C-202ENST00000524596 ABCA13Q86UQ4 5058 aa2.68□□□□□ -1.98
LIN7C-202ENST00000524596 DYNC1H1Q14204 4646 aaKnown RBP2.67□□□□□ -1.98
LIN7C-202ENST00000524596 KIAA1109Q2LD37 5005 aa2.67□□□□□ -1.98
LIN7C-202ENST00000524596 KRTAP4-5Q9BYR2 181 aa2.67□□□□□ -1.98
LIN7C-202ENST00000524596 CSMD3Q7Z407 3707 aa2.66□□□□□ -1.98
LIN7C-202ENST00000524596 LCE3AQ5TA76 89 aa2.66□□□□□ -1.98
LIN7C-202ENST00000524596 STARD9Q9P2P6 4700 aa2.66□□□□□ -1.98
LIN7C-202ENST00000524596 FAT3Q8TDW7 4589 aa2.65□□□□□ -1.98
LIN7C-202ENST00000524596 VPS13DQ5THJ4 4388 aa2.65□□□□□ -1.99
LIN7C-202ENST00000524596 DNAH11Q96DT5 4516 aa2.64□□□□□ -1.99
LIN7C-202ENST00000524596 VPS13BQ7Z7G8 4022 aa2.63□□□□□ -1.99
LIN7C-202ENST00000524596 DNAH17Q9UFH2 4485 aa2.62□□□□□ -1.99
LIN7C-202ENST00000524596 FAT2Q9NYQ8 4349 aa2.62□□□□□ -1.99
LIN7C-202ENST00000524596 LOC100996750A0A140TA64 210 aa2.62□□□□□ -1.99
LIN7C-202ENST00000524596 KRTAP4-6Q9BYQ5 205 aa2.62□□□□□ -1.99
LIN7C-202ENST00000524596 DNAH2Q9P225 4427 aa2.58□□□□□ -2
LIN7C-202ENST00000524596 KRTAP9-6A0A140TA67 174 aa2.58□□□□□ -2
LIN7C-202ENST00000524596 UBR4Q5T4S7 5183 aa2.58□□□□□ -2
LIN7C-202ENST00000524596 HSPG2P98160 4391 aa2.57□□□□□ -2
LIN7C-202ENST00000524596 KRTAP10-12P60413 245 aa2.57□□□□□ -2
LIN7C-202ENST00000524596 KRTAP10-5P60370 271 aa2.57□□□□□ -2
LIN7C-202ENST00000524596 HERC1Q15751 4861 aa2.55□□□□□ -2
LIN7C-202ENST00000524596 KRTAP8-1Q8IUC2 63 aa2.55□□□□□ -2
LIN7C-202ENST00000524596 KRTAP12-4P60329 112 aa2.54□□□□□ -2
LIN7C-202ENST00000524596 KRTAP9-2Q9BYQ4 174 aa2.53□□□□□ -2
LIN7C-202ENST00000524596 TNXBP22105 4242 aa2.51□□□□□ -2.01
LIN7C-202ENST00000524596 PKD1P98161 4303 aa2.51□□□□□ -2.01
LIN7C-202ENST00000524596 LRP1BQ9NZR2 4599 aa2.51□□□□□ -2.01
LIN7C-202ENST00000524596 HMCN2Q8NDA2 5059 aa2.48□□□□□ -2.01
LIN7C-202ENST00000524596 APOBP04114 4563 aaKnown RBP2.48□□□□□ -2.01
LIN7C-202ENST00000524596 MYCBP2O75592 4640 aa2.47□□□□□ -2.01
LIN7C-202ENST00000524596 KRTAP10-4P60372 401 aaPredicted RBP2.44□□□□□ -2.02
LIN7C-202ENST00000524596 LCE3CQ5T5A8 94 aa2.42□□□□□ -2.02
LIN7C-202ENST00000524596 KRTAP2-2Q9BYT5 123 aa2.39□□□□□ -2.03
LIN7C-202ENST00000524596 DNAH5Q8TE73 4624 aa2.39□□□□□ -2.03
LIN7C-202ENST00000524596 RNF213Q63HN8 5207 aa2.38□□□□□ -2.03
LIN7C-202ENST00000524596 DNAH8Q96JB1 4490 aa2.37□□□□□ -2.03
LIN7C-202ENST00000524596 FAT4Q6V0I7 4981 aa2.37□□□□□ -2.03
LIN7C-202ENST00000524596 LCE5AQ5TCM9 118 aa2.37□□□□□ -2.03
LIN7C-202ENST00000524596 CRCT1Q9UGL9 99 aa2.36□□□□□ -2.03
LIN7C-202ENST00000524596 LCE1AQ5T7P2 110 aa2.33□□□□□ -2.04
LIN7C-202ENST00000524596 FAT1Q14517 4588 aa2.33□□□□□ -2.04
LIN7C-202ENST00000524596 MT1HL1P0DM35 61 aa2.31□□□□□ -2.04
LIN7C-202ENST00000524596 FLGP20930 4061 aaPredicted RBP2.29□□□□□ -2.04
LIN7C-202ENST00000524596 PRM1P04553 51 aa2.28□□□□□ -2.04
LIN7C-202ENST00000524596 KRTAP9-7A8MTY7 169 aa2.27□□□□□ -2.05
LIN7C-202ENST00000524596 LCE1EQ5T753 118 aa2.26□□□□□ -2.05
LIN7C-202ENST00000524596 MUC2Q02817 5179 aa2.26□□□□□ -2.05
LIN7C-202ENST00000524596 KRTAP2-3P0C7H8 128 aa2.25□□□□□ -2.05
LIN7C-202ENST00000524596 KRTAP2-4Q9BYR9 128 aa2.25□□□□□ -2.05
LIN7C-202ENST00000524596 KRTAP2-1Q9BYU5 128 aa2.25□□□□□ -2.05
LIN7C-202ENST00000524596 LCE3EQ5T5B0 92 aa2.24□□□□□ -2.05
LIN7C-202ENST00000524596 LCE1FQ5T754 118 aa2.24□□□□□ -2.05
LIN7C-202ENST00000524596 LRP2P98164 4655 aa2.22□□□□□ -2.05
LIN7C-202ENST00000524596 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.21□□□□□ -2.06
LIN7C-202ENST00000524596 LCE4AQ5TA78 99 aa2.21□□□□□ -2.06
LIN7C-202ENST00000524596 LRP1Q07954 4544 aaKnown RBP2.2□□□□□ -2.06
LIN7C-202ENST00000524596 LCE3DQ9BYE3 92 aa2.19□□□□□ -2.06
LIN7C-202ENST00000524596 KRTAP6-3Q3LI67 103 aa2.19□□□□□ -2.06
LIN7C-202ENST00000524596 KRTAP9-4Q9BYQ2 154 aa2.18□□□□□ -2.06
LIN7C-202ENST00000524596 KRTAP4-8Q9BYQ9 185 aa2.17□□□□□ -2.06
LIN7C-202ENST00000524596 KRTAP10-7P60409 375 aaPredicted RBP2.16□□□□□ -2.06
LIN7C-202ENST00000524596 SPRR2GQ9BYE4 73 aa2.15□□□□□ -2.06
LIN7C-202ENST00000524596 KRTAP19-5Q3LI72 72 aa2.15□□□□□ -2.07
LIN7C-202ENST00000524596 MUC17Q685J3 4493 aa2.14□□□□□ -2.07
LIN7C-202ENST00000524596 LCE1DQ5T752 114 aa2.12□□□□□ -2.07
LIN7C-202ENST00000524596 SYNE1Q8NF91 8797 aaKnown RBP2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms