RNA–Protein interactions for RNA: ENST00000523978.1

EFCAB13-213, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 3

Gene EFCAB13, Length 548 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-213ENST00000523978 APLNQ9ULZ1 77 aa2.47□□□□□ -2.01
EFCAB13-213ENST00000523978 AKAP6Q13023 2319 aa2.47□□□□□ -2.01
EFCAB13-213ENST00000523978 TACC2O95359 2948 aa2.47□□□□□ -2.01
EFCAB13-213ENST00000523978 DEFB105AQ8NG35 78 aa2.46□□□□□ -2.02
EFCAB13-213ENST00000523978 MAP1AP78559 2803 aaPredicted RBP2.46□□□□□ -2.02
EFCAB13-213ENST00000523978 CUBNO60494 3623 aa2.46□□□□□ -2.02
EFCAB13-213ENST00000523978 MXRA5Q9NR99 2828 aa2.45□□□□□ -2.02
EFCAB13-213ENST00000523978 DEFB108AA8MXU0 73 aa2.45□□□□□ -2.02
EFCAB13-213ENST00000523978 BSNQ9UPA5 3926 aa2.45□□□□□ -2.02
EFCAB13-213ENST00000523978 VWFP04275 2813 aa2.45□□□□□ -2.02
EFCAB13-213ENST00000523978 NSD1Q96L73 2696 aaPredicted RBP2.44□□□□□ -2.02
EFCAB13-213ENST00000523978 RYR2Q92736 4967 aa2.44□□□□□ -2.02
EFCAB13-213ENST00000523978 PRRC2CQ9Y520 2896 aaKnown RBP2.42□□□□□ -2.02
EFCAB13-213ENST00000523978 PRLHP81277 87 aa2.42□□□□□ -2.02
EFCAB13-213ENST00000523978 ZNF469Q96JG9 3925 aaPredicted RBP2.4□□□□□ -2.02
EFCAB13-213ENST00000523978 KLK9Q2XQG4 91 aa2.4□□□□□ -2.03
EFCAB13-213ENST00000523978 S4R3F8 94 aa2.4□□□□□ -2.03
EFCAB13-213ENST00000523978 VPS13CQ709C8 3753 aa2.39□□□□□ -2.03
EFCAB13-213ENST00000523978 HERC2O95714 4834 aa2.39□□□□□ -2.03
EFCAB13-213ENST00000523978 SPRR1BP22528 89 aa2.39□□□□□ -2.03
EFCAB13-213ENST00000523978 TENM3Q9P273 2699 aa2.38□□□□□ -2.03
EFCAB13-213ENST00000523978 TENM1Q9UKZ4 2725 aa2.38□□□□□ -2.03
EFCAB13-213ENST00000523978 ANK2Q01484 3957 aa2.38□□□□□ -2.03
EFCAB13-213ENST00000523978 KIAA1109Q2LD37 5005 aa2.37□□□□□ -2.03
EFCAB13-213ENST00000523978 NOP10Q9NPE3 64 aaKnown RBP2.35□□□□□ -2.03
EFCAB13-213ENST00000523978 PRKDCP78527 4128 aaKnown RBP2.34□□□□□ -2.03
EFCAB13-213ENST00000523978 ROS1P08922 2347 aa2.34□□□□□ -2.03
EFCAB13-213ENST00000523978 SVEP1Q4LDE5 3571 aa2.33□□□□□ -2.04
EFCAB13-213ENST00000523978 TENM2Q9NT68 2774 aa2.3□□□□□ -2.04
EFCAB13-213ENST00000523978 ZANQ9Y493 2812 aa2.29□□□□□ -2.04
EFCAB13-213ENST00000523978 KRTAP12-1P59990 96 aa2.29□□□□□ -2.04
EFCAB13-213ENST00000523978 TRRAPQ9Y4A5 3859 aa2.28□□□□□ -2.04
EFCAB13-213ENST00000523978 SPINK1P00995 79 aa2.28□□□□□ -2.04
EFCAB13-213ENST00000523978 DEFB133Q30KQ1 61 aa2.28□□□□□ -2.04
EFCAB13-213ENST00000523978 ANK3Q12955 4377 aaKnown RBP2.27□□□□□ -2.05
EFCAB13-213ENST00000523978 U3KQA8 63 aa2.27□□□□□ -2.05
EFCAB13-213ENST00000523978 ABCA13Q86UQ4 5058 aa2.27□□□□□ -2.05
EFCAB13-213ENST00000523978 STAB2Q8WWQ8 2551 aa2.26□□□□□ -2.05
EFCAB13-213ENST00000523978 STATHP02808 62 aa2.25□□□□□ -2.05
EFCAB13-213ENST00000523978 HERC1Q15751 4861 aa2.25□□□□□ -2.05
EFCAB13-213ENST00000523978 KRTAP21-2Q3LI59 83 aa2.23□□□□□ -2.05
EFCAB13-213ENST00000523978 COL7A1Q02388 2944 aa2.22□□□□□ -2.05
EFCAB13-213ENST00000523978 H0YGG7 62 aa2.22□□□□□ -2.05
EFCAB13-213ENST00000523978 APELAP0DMC3 54 aa2.22□□□□□ -2.05
EFCAB13-213ENST00000523978 DYNC2H1Q8NCM8 4307 aaKnown RBP2.21□□□□□ -2.06
EFCAB13-213ENST00000523978 COX14Q96I36 57 aa2.21□□□□□ -2.06
EFCAB13-213ENST00000523978 SACSQ9NZJ4 4579 aa2.2□□□□□ -2.06
EFCAB13-213ENST00000523978 A0A0D9SG42 100 aa2.2□□□□□ -2.06
EFCAB13-213ENST00000523978 KRTAP6-3Q3LI67 103 aa2.19□□□□□ -2.06
EFCAB13-213ENST00000523978 H3BUX3 64 aa2.18□□□□□ -2.06
EFCAB13-213ENST00000523978 KRTAP12-4P60329 112 aa2.18□□□□□ -2.06
EFCAB13-213ENST00000523978 KRTAP13-1Q8IUC0 172 aa2.17□□□□□ -2.06
EFCAB13-213ENST00000523978 DNAH1Q9P2D7 4330 aa2.16□□□□□ -2.06
EFCAB13-213ENST00000523978 CMYA5Q8N3K9 4069 aa2.15□□□□□ -2.06
EFCAB13-213ENST00000523978 DMBT1Q9UGM3 2413 aaPredicted RBP2.13□□□□□ -2.07
EFCAB13-213ENST00000523978 M0QZ58 72 aa2.13□□□□□ -2.07
EFCAB13-213ENST00000523978 RHPN1-AS1Q9BWJ2 59 aa2.13□□□□□ -2.07
EFCAB13-213ENST00000523978 HRNRQ86YZ3 2850 aaPredicted RBP2.13□□□□□ -2.07
EFCAB13-213ENST00000523978 DEFB1P60022 68 aa2.12□□□□□ -2.07
EFCAB13-213ENST00000523978 MUC2Q02817 5179 aa2.11□□□□□ -2.07
EFCAB13-213ENST00000523978 HECTD4Q9Y4D8 3996 aa2.1□□□□□ -2.07
EFCAB13-213ENST00000523978 VPS13DQ5THJ4 4388 aa2.09□□□□□ -2.07
EFCAB13-213ENST00000523978 FRAS1Q86XX4 4008 aa2.07□□□□□ -2.08
EFCAB13-213ENST00000523978 SRRM2Q9UQ35 2752 aaKnown RBP2.07□□□□□ -2.08
EFCAB13-213ENST00000523978 CSMD3Q7Z407 3707 aa2.06□□□□□ -2.08
EFCAB13-213ENST00000523978 DNAH11Q96DT5 4516 aa2.05□□□□□ -2.08
EFCAB13-213ENST00000523978 LYSTQ99698 3801 aa2.04□□□□□ -2.08
EFCAB13-213ENST00000523978 HTN1P15515 57 aa2.04□□□□□ -2.08
EFCAB13-213ENST00000523978 FSIP2Q5CZC0 6907 aa2.04□□□□□ -2.08
EFCAB13-213ENST00000523978 CRCT1Q9UGL9 99 aa2.04□□□□□ -2.08
EFCAB13-213ENST00000523978 DNAH9Q9NYC9 4486 aa2.04□□□□□ -2.08
EFCAB13-213ENST00000523978 RNF213Q63HN8 5207 aa2.03□□□□□ -2.08
EFCAB13-213ENST00000523978 HMCN1Q96RW7 5635 aa2.03□□□□□ -2.09
EFCAB13-213ENST00000523978 FAT4Q6V0I7 4981 aa2.02□□□□□ -2.09
EFCAB13-213ENST00000523978 PLECQ15149 4684 aaKnown RBP1.99□□□□□ -2.09
EFCAB13-213ENST00000523978 KMT2AQ03164 3969 aa1.99□□□□□ -2.09
EFCAB13-213ENST00000523978 STARD9Q9P2P6 4700 aa1.99□□□□□ -2.09
EFCAB13-213ENST00000523978 DNAH10Q8IVF4 4471 aa1.98□□□□□ -2.09
EFCAB13-213ENST00000523978 DEFB108BQ8NET1 73 aa1.98□□□□□ -2.09
EFCAB13-213ENST00000523978 HMCN2Q8NDA2 5059 aa1.97□□□□□ -2.09
EFCAB13-213ENST00000523978 DEFB110Q30KQ9 67 aa1.97□□□□□ -2.09
EFCAB13-213ENST00000523978 DNAH7Q8WXX0 4024 aa1.95□□□□□ -2.1
EFCAB13-213ENST00000523978 DEFB136Q30KP8 78 aa1.95□□□□□ -2.1
EFCAB13-213ENST00000523978 MYCBP2O75592 4640 aa1.95□□□□□ -2.1
EFCAB13-213ENST00000523978 PKHD1P08F94 4074 aa1.94□□□□□ -2.1
EFCAB13-213ENST00000523978 DYNC1H1Q14204 4646 aaKnown RBP1.94□□□□□ -2.1
EFCAB13-213ENST00000523978 HSPG2P98160 4391 aa1.94□□□□□ -2.1
EFCAB13-213ENST00000523978 KRTAP12-3P60328 96 aa1.93□□□□□ -2.1
EFCAB13-213ENST00000523978 DNAH3Q8TD57 4116 aa1.92□□□□□ -2.1
EFCAB13-213ENST00000523978 TNP1P09430 55 aa1.91□□□□□ -2.1
EFCAB13-213ENST00000523978 DEFB135Q30KP9 77 aa1.91□□□□□ -2.1
EFCAB13-213ENST00000523978 SPINK6Q6UWN8 80 aa1.91□□□□□ -2.1
EFCAB13-213ENST00000523978 KRTAP10-4P60372 401 aaPredicted RBP1.9□□□□□ -2.11
EFCAB13-213ENST00000523978 HUWE1Q7Z6Z7 4374 aaKnown RBP1.89□□□□□ -2.11
EFCAB13-213ENST00000523978 A0A096LNI7 61 aa1.88□□□□□ -2.11
EFCAB13-213ENST00000523978 FAT1Q14517 4588 aa1.87□□□□□ -2.11
EFCAB13-213ENST00000523978 FAT2Q9NYQ8 4349 aa1.86□□□□□ -2.11
EFCAB13-213ENST00000523978 LRP2P98164 4655 aa1.86□□□□□ -2.11
EFCAB13-213ENST00000523978 APOBP04114 4563 aaKnown RBP1.86□□□□□ -2.11
EFCAB13-213ENST00000523978 DNAH8Q96JB1 4490 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms