RNA–Protein interactions for RNA: ENST00000523944.5

MCM4-215, Transcript of minichromosome maintenance complex component 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MCM4, Length 4,105 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4-215ENST00000523944 KRTAP12-2P59991 146 aa6.3□□□□□ -1.4
MCM4-215ENST00000523944 DNAH8Q96JB1 4490 aa6.29□□□□□ -1.4
MCM4-215ENST00000523944 TNP1P09430 55 aa6.29□□□□□ -1.4
MCM4-215ENST00000523944 KRTAP4-5Q9BYR2 181 aa6.28□□□□□ -1.4
MCM4-215ENST00000523944 KRTAP13-4Q3LI77 160 aa6.26□□□□□ -1.41
MCM4-215ENST00000523944 DNAH2Q9P225 4427 aa6.25□□□□□ -1.41
MCM4-215ENST00000523944 DYNC1H1Q14204 4646 aaKnown RBP6.25□□□□□ -1.41
MCM4-215ENST00000523944 KRTAP10-6P60371 365 aaPredicted RBP6.24□□□□□ -1.41
MCM4-215ENST00000523944 KRTAP12-1P59990 96 aa6.2□□□□□ -1.42
MCM4-215ENST00000523944 CMYA5Q8N3K9 4069 aa6.2□□□□□ -1.42
MCM4-215ENST00000523944 DNAH3Q8TD57 4116 aa6.18□□□□□ -1.42
MCM4-215ENST00000523944 ALMS1Q8TCU4 4167 aa6.15□□□□□ -1.42
MCM4-215ENST00000523944 DNAH7Q8WXX0 4024 aa6.14□□□□□ -1.43
MCM4-215ENST00000523944 KRTAP3-3Q9BYR6 98 aa6.14□□□□□ -1.43
MCM4-215ENST00000523944 MYCBP2O75592 4640 aa6.13□□□□□ -1.43
MCM4-215ENST00000523944 PP632Q6XCG6 107 aa6.13□□□□□ -1.43
MCM4-215ENST00000523944 KRTAP10-10P60014 251 aa6.11□□□□□ -1.43
MCM4-215ENST00000523944 RYR1P21817 5038 aa6.11□□□□□ -1.43
MCM4-215ENST00000523944 KIAA1109Q2LD37 5005 aa6.1□□□□□ -1.43
MCM4-215ENST00000523944 FRAS1Q86XX4 4008 aa6.08□□□□□ -1.44
MCM4-215ENST00000523944 DYNC2H1Q8NCM8 4307 aaKnown RBP6.08□□□□□ -1.44
MCM4-215ENST00000523944 DNAH6Q9C0G6 4158 aa6.08□□□□□ -1.44
MCM4-215ENST00000523944 KRTAP3-2Q9BYR7 98 aa6.08□□□□□ -1.44
MCM4-215ENST00000523944 VPS13BQ7Z7G8 4022 aa6.05□□□□□ -1.44
MCM4-215ENST00000523944 SACSQ9NZJ4 4579 aa6.03□□□□□ -1.44
MCM4-215ENST00000523944 LRP1Q07954 4544 aaKnown RBP5.98□□□□□ -1.45
MCM4-215ENST00000523944 HYDINQ4G0P3 5121 aa5.98□□□□□ -1.45
MCM4-215ENST00000523944 HECTD4Q9Y4D8 3996 aa5.97□□□□□ -1.45
MCM4-215ENST00000523944 FAT2Q9NYQ8 4349 aa5.95□□□□□ -1.46
MCM4-215ENST00000523944 FAT3Q8TDW7 4589 aa5.95□□□□□ -1.46
MCM4-215ENST00000523944 RYR3Q15413 4870 aa5.95□□□□□ -1.46
MCM4-215ENST00000523944 APOBP04114 4563 aaKnown RBP5.93□□□□□ -1.46
MCM4-215ENST00000523944 PKHD1P08F94 4074 aa5.9□□□□□ -1.47
MCM4-215ENST00000523944 KRTAP17-1Q9BYP8 105 aa5.87□□□□□ -1.47
MCM4-215ENST00000523944 LORP23490 312 aaPredicted RBP5.85□□□□□ -1.47
MCM4-215ENST00000523944 KRTAP4-1Q9BYQ7 146 aa5.79□□□□□ -1.48
MCM4-215ENST00000523944 RYR2Q92736 4967 aa5.76□□□□□ -1.49
MCM4-215ENST00000523944 KMT2CQ8NEZ4 4911 aaKnown RBP5.75□□□□□ -1.49
MCM4-215ENST00000523944 KRTAP15-1Q3LI76 137 aa5.72□□□□□ -1.49
MCM4-215ENST00000523944 PRO2289Q9P1D8 64 aa5.71□□□□□ -1.5
MCM4-215ENST00000523944 LRP2P98164 4655 aa5.69□□□□□ -1.5
MCM4-215ENST00000523944 PKD1P98161 4303 aa5.6□□□□□ -1.51
MCM4-215ENST00000523944 HERC2O95714 4834 aa5.6□□□□□ -1.51
MCM4-215ENST00000523944 HSPG2P98160 4391 aa5.56□□□□□ -1.52
MCM4-215ENST00000523944 LPAP08519 4548 aa5.46□□□□□ -1.54
MCM4-215ENST00000523944 EPPK1P58107 5090 aaKnown RBP5.42□□□□□ -1.54
MCM4-215ENST00000523944 KRTAP10-12P60413 245 aa5.38□□□□□ -1.55
MCM4-215ENST00000523944 LCE3AQ5TA76 89 aa5.38□□□□□ -1.55
MCM4-215ENST00000523944 MT1HP80294 61 aa5.36□□□□□ -1.55
MCM4-215ENST00000523944 ABCA13Q86UQ4 5058 aa5.31□□□□□ -1.56
MCM4-215ENST00000523944 MT2AP02795 61 aa5.31□□□□□ -1.56
MCM4-215ENST00000523944 PKHD1L1Q86WI1 4243 aa5.3□□□□□ -1.56
MCM4-215ENST00000523944 KRTAP12-3P60328 96 aa5.3□□□□□ -1.56
MCM4-215ENST00000523944 MT1FP04733 61 aa5.28□□□□□ -1.56
MCM4-215ENST00000523944 BIRC6Q9NR09 4857 aa5.27□□□□□ -1.57
MCM4-215ENST00000523944 KRTAP23-1A1A580 65 aa5.26□□□□□ -1.57
MCM4-215ENST00000523944 TNXBP22105 4242 aa5.26□□□□□ -1.57
MCM4-215ENST00000523944 LCE2DQ5TA82 110 aaPredicted RBP5.25□□□□□ -1.57
MCM4-215ENST00000523944 PCLOQ9Y6V0 5065 aa5.23□□□□□ -1.57
MCM4-215ENST00000523944 SPRR2GQ9BYE4 73 aa5.2□□□□□ -1.58
MCM4-215ENST00000523944 HERC1Q15751 4861 aa5.17□□□□□ -1.58
MCM4-215ENST00000523944 KRTAP19-1Q8IUB9 90 aa5.14□□□□□ -1.59
MCM4-215ENST00000523944 MUC2Q02817 5179 aa5.11□□□□□ -1.59
MCM4-215ENST00000523944 CRCT1Q9UGL9 99 aa5.08□□□□□ -1.6
MCM4-215ENST00000523944 LCE2CQ5TA81 110 aa5.07□□□□□ -1.6
MCM4-215ENST00000523944 RNF213Q63HN8 5207 aa5.07□□□□□ -1.6
MCM4-215ENST00000523944 INE1O15225 51 aa5.04□□□□□ -1.6
MCM4-215ENST00000523944 KRTAP19-2Q3LHN2 52 aa5.02□□□□□ -1.61
MCM4-215ENST00000523944 MUC17Q685J3 4493 aa5.01□□□□□ -1.61
MCM4-215ENST00000523944 FAT4Q6V0I7 4981 aa4.99□□□□□ -1.61
MCM4-215ENST00000523944 KRTAP9-8Q9BYQ0 159 aa4.97□□□□□ -1.61
MCM4-215ENST00000523944 UBR4Q5T4S7 5183 aa4.93□□□□□ -1.62
MCM4-215ENST00000523944 KRTAP10-7P60409 375 aaPredicted RBP4.92□□□□□ -1.62
MCM4-215ENST00000523944 FSIP2Q5CZC0 6907 aa4.92□□□□□ -1.62
MCM4-215ENST00000523944 FLGP20930 4061 aaPredicted RBP4.92□□□□□ -1.62
MCM4-215ENST00000523944 KRTAP8-1Q8IUC2 63 aa4.91□□□□□ -1.62
MCM4-215ENST00000523944 MT1BP07438 61 aa4.9□□□□□ -1.62
MCM4-215ENST00000523944 KRTAP19-8Q3LI54 63 aa4.9□□□□□ -1.63
MCM4-215ENST00000523944 KRTAP19-5Q3LI72 72 aa4.88□□□□□ -1.63
MCM4-215ENST00000523944 MT1XP80297 61 aa4.88□□□□□ -1.63
MCM4-215ENST00000523944 KRTAP10-5P60370 271 aa4.84□□□□□ -1.64
MCM4-215ENST00000523944 HMCN2Q8NDA2 5059 aa4.8□□□□□ -1.64
MCM4-215ENST00000523944 KRTAP9-3Q9BYQ3 159 aa4.79□□□□□ -1.64
MCM4-215ENST00000523944 KRTAP4-8A0A0G2JLE6 195 aa4.76□□□□□ -1.65
MCM4-215ENST00000523944 KRTAP4-8Q9BYQ9 185 aa4.76□□□□□ -1.65
MCM4-215ENST00000523944 LCE3CQ5T5A8 94 aa4.72□□□□□ -1.65
MCM4-215ENST00000523944 LCE2BO14633 110 aa4.68□□□□□ -1.66
MCM4-215ENST00000523944 SPRR5A0A1B0GTR4 108 aa4.65□□□□□ -1.66
MCM4-215ENST00000523944 SPRR2FQ96RM1 72 aa4.62□□□□□ -1.67
MCM4-215ENST00000523944 KRTAP4-7Q9BYR0 210 aa4.52□□□□□ -1.69
MCM4-215ENST00000523944 SYNE1Q8NF91 8797 aaKnown RBP4.5□□□□□ -1.69
MCM4-215ENST00000523944 USH2AO75445 5202 aa4.46□□□□□ -1.7
MCM4-215ENST00000523944 OBSCNQ5VST9 7968 aa4.42□□□□□ -1.7
MCM4-215ENST00000523944 MT1GP13640 62 aa4.41□□□□□ -1.7
MCM4-215ENST00000523944 LCE2AQ5TA79 106 aaPredicted RBP4.4□□□□□ -1.71
MCM4-215ENST00000523944 KRTAP19-4Q3LI73 84 aa4.34□□□□□ -1.71
MCM4-215ENST00000523944 KMT2DO14686 5537 aa4.33□□□□□ -1.72
MCM4-215ENST00000523944 MT1LQ93083 61 aa4.31□□□□□ -1.72
MCM4-215ENST00000523944 MT1EP04732 61 aa4.3□□□□□ -1.72
MCM4-215ENST00000523944 DSTQ03001 7570 aaKnown RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms