RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 KRTAP2-1Q9BYU5 128 aa10.95□□□□□ -0.66
PVT1-219ENST00000523427 PRO2289Q9P1D8 64 aa10.93□□□□□ -0.66
PVT1-219ENST00000523427 TAX1BP3O14907 124 aa10.91□□□□□ -0.66
PVT1-219ENST00000523427 CYP4F30PQ9H0H9 118 aa10.91□□□□□ -0.66
PVT1-219ENST00000523427 LCE1AQ5T7P2 110 aa10.9□□□□□ -0.66
PVT1-219ENST00000523427 MT1XP80297 61 aa10.88□□□□□ -0.67
PVT1-219ENST00000523427 A8MUN3 132 aa10.84□□□□□ -0.67
PVT1-219ENST00000523427 K7EP34 96 aa10.83□□□□□ -0.68
PVT1-219ENST00000523427 SPCS1Q9Y6A9 102 aa10.82□□□□□ -0.68
PVT1-219ENST00000523427 NDUFC1O43677 76 aa10.81□□□□□ -0.68
PVT1-219ENST00000523427 SPRR2DP22532 72 aa10.81□□□□□ -0.68
PVT1-219ENST00000523427 ADM2Q7Z4H4 148 aa10.8□□□□□ -0.68
PVT1-219ENST00000523427 PLAC4Q8WY50 150 aa10.79□□□□□ -0.68
PVT1-219ENST00000523427 H0YAA0 97 aa10.77□□□□□ -0.69
PVT1-219ENST00000523427 SMIM6P0DI80 62 aa10.75□□□□□ -0.69
PVT1-219ENST00000523427 LOC101927531A0A1B0GV80 90 aa10.7□□□□□ -0.7
PVT1-219ENST00000523427 TRAV22A0A0B4J277 110 aa10.69□□□□□ -0.7
PVT1-219ENST00000523427 KRTAP4-8A0A0G2JLE6 195 aa10.69□□□□□ -0.7
PVT1-219ENST00000523427 KRTAP4-8Q9BYQ9 185 aa10.69□□□□□ -0.7
PVT1-219ENST00000523427 KRTAP12-2P59991 146 aa10.66□□□□□ -0.7
PVT1-219ENST00000523427 PRO0461Q9UI25 63 aa10.62□□□□□ -0.71
PVT1-219ENST00000523427 ACYP1P07311 99 aa10.58□□□□□ -0.72
PVT1-219ENST00000523427 LCE3BQ5TA77 95 aa10.55□□□□□ -0.72
PVT1-219ENST00000523427 R4GN34 69 aa10.55□□□□□ -0.72
PVT1-219ENST00000523427 H0Y9P7 68 aa10.49□□□□□ -0.73
PVT1-219ENST00000523427 M0QZ58 72 aa10.46□□□□□ -0.73
PVT1-219ENST00000523427 P0C880 135 aa10.46□□□□□ -0.73
PVT1-219ENST00000523427 LINC01554Q52M75 96 aa10.43□□□□□ -0.74
PVT1-219ENST00000523427 UQCRQO14949 82 aa10.42□□□□□ -0.74
PVT1-219ENST00000523427 ATOX1O00244 68 aa10.41□□□□□ -0.74
PVT1-219ENST00000523427 KRTAP10-7P60409 375 aaPredicted RBP10.41□□□□□ -0.74
PVT1-219ENST00000523427 ETDBQ3ZM63 59 aa10.35□□□□□ -0.75
PVT1-219ENST00000523427 C20orf197Q8N268 126 aa10.35□□□□□ -0.75
PVT1-219ENST00000523427 COL5A1-AS1Q5SY13 56 aa10.34□□□□□ -0.75
PVT1-219ENST00000523427 HIST1H4AP62805 103 aaKnown RBP10.32□□□□□ -0.76
PVT1-219ENST00000523427 GPR98Q8WXG9 6306 aa10.31□□□□□ -0.76
PVT1-219ENST00000523427 KRTAP10-12P60413 245 aa10.29□□□□□ -0.76
PVT1-219ENST00000523427 LINC00208Q96KT6 92 aa10.29□□□□□ -0.76
PVT1-219ENST00000523427 F8W1H4 67 aa10.22□□□□□ -0.77
PVT1-219ENST00000523427 GTF2H5Q6ZYL4 71 aa10.22□□□□□ -0.77
PVT1-219ENST00000523427 KRTAP3-2Q9BYR7 98 aa10.2□□□□□ -0.78
PVT1-219ENST00000523427 LOC105371267A0A1B0GV96 52 aa10.14□□□□□ -0.79
PVT1-219ENST00000523427 ATP5EP2Q5VTU8 51 aa10.12□□□□□ -0.79
PVT1-219ENST00000523427 DSTQ03001 7570 aaKnown RBP10.11□□□□□ -0.79
PVT1-219ENST00000523427 MP68P56378 58 aa10.09□□□□□ -0.79
PVT1-219ENST00000523427 KRTAP4-9Q9BYQ8 210 aa10.06□□□□□ -0.8
PVT1-219ENST00000523427 MT-ATP8P03928 68 aa10.04□□□□□ -0.8
PVT1-219ENST00000523427 DMAC1Q96GE9 116 aa9.96□□□□□ -0.82
PVT1-219ENST00000523427 OCR1Q9BZK8 76 aa9.95□□□□□ -0.82
PVT1-219ENST00000523427 FAM240AA0A1B0GVK7 77 aa9.94□□□□□ -0.82
PVT1-219ENST00000523427 LINC00643Q86TS7 51 aa9.83□□□□□ -0.84
PVT1-219ENST00000523427 LCE5AQ5TCM9 118 aa9.8□□□□□ -0.84
PVT1-219ENST00000523427 H3BPC8 53 aa9.76□□□□□ -0.85
PVT1-219ENST00000523427 TRAV7A0A075B6U4 112 aa9.72□□□□□ -0.85
PVT1-219ENST00000523427 KRTAP19-7Q3SYF9 63 aa9.72□□□□□ -0.85
PVT1-219ENST00000523427 KRTAP19-3Q7Z4W3 81 aa9.72□□□□□ -0.85
PVT1-219ENST00000523427 PCP4L1A6NKN8 68 aa9.7□□□□□ -0.86
PVT1-219ENST00000523427 MT1EP04732 61 aa9.68□□□□□ -0.86
PVT1-219ENST00000523427 LCE1DQ5T752 114 aa9.68□□□□□ -0.86
PVT1-219ENST00000523427 CAMK2N1Q7Z7J9 78 aa9.65□□□□□ -0.86
PVT1-219ENST00000523427 ACYP2P14621 99 aa9.64□□□□□ -0.87
PVT1-219ENST00000523427 SPTSSBQ8NFR3 76 aa9.63□□□□□ -0.87
PVT1-219ENST00000523427 SCGB1A1P11684 91 aa9.59□□□□□ -0.87
PVT1-219ENST00000523427 CYSTM1Q9H1C7 97 aa9.58□□□□□ -0.88
PVT1-219ENST00000523427 MT4P47944 62 aa9.56□□□□□ -0.88
PVT1-219ENST00000523427 CHKB-CPT1BH3BT56 60 aa9.53□□□□□ -0.88
PVT1-219ENST00000523427 KRTAP13-4Q3LI77 160 aa9.5□□□□□ -0.89
PVT1-219ENST00000523427 HMCN1Q96RW7 5635 aa9.49□□□□□ -0.89
PVT1-219ENST00000523427 LCE4AQ5TA78 99 aa9.44□□□□□ -0.9
PVT1-219ENST00000523427 MT1GP13640 62 aa9.41□□□□□ -0.9
PVT1-219ENST00000523427 KRTAP19-5Q3LI72 72 aa9.38□□□□□ -0.91
PVT1-219ENST00000523427 AHNAK2Q8IVF2 5795 aa9.38□□□□□ -0.91
PVT1-219ENST00000523427 A0A0D9SG42 100 aa9.36□□□□□ -0.91
PVT1-219ENST00000523427 PP632Q6XCG6 107 aa9.35□□□□□ -0.91
PVT1-219ENST00000523427 MT1MQ8N339 61 aa9.27□□□□□ -0.93
PVT1-219ENST00000523427 KRTAP5-10Q6L8G5 202 aa9.24□□□□□ -0.93
PVT1-219ENST00000523427 KRTAP4-6Q9BYQ5 205 aa9.18□□□□□ -0.94
PVT1-219ENST00000523427 KRTAP4-3Q9BYR4 195 aa9.17□□□□□ -0.94
PVT1-219ENST00000523427 MT1LQ93083 61 aa9.15□□□□□ -0.94
PVT1-219ENST00000523427 SPINT4Q6UDR6 99 aa9.13□□□□□ -0.95
PVT1-219ENST00000523427 KRTAP5-4Q6L8H1 288 aa9.12□□□□□ -0.95
PVT1-219ENST00000523427 J3QR89 54 aa9.11□□□□□ -0.95
PVT1-219ENST00000523427 SNURFQ9Y675 71 aa9.11□□□□□ -0.95
PVT1-219ENST00000523427 A0A1B0GV90 55 aa9.05□□□□□ -0.96
PVT1-219ENST00000523427 SPATA8Q6RVD6 105 aa9.04□□□□□ -0.96
PVT1-219ENST00000523427 SMIM20Q8N5G0 67 aa9.03□□□□□ -0.96
PVT1-219ENST00000523427 KRTAP5-7Q6L8G8 165 aa8.95□□□□□ -0.98
PVT1-219ENST00000523427 SPANXA2-OT1Q8N9U9 137 aa8.94□□□□□ -0.98
PVT1-219ENST00000523427 SERP1Q9Y6X1 66 aa8.93□□□□□ -0.98
PVT1-219ENST00000523427 SEC61GP60059 68 aa8.92□□□□□ -0.98
PVT1-219ENST00000523427 KRTAP5-3Q6L8H2 238 aa8.92□□□□□ -0.98
PVT1-219ENST00000523427 KRTAP12-1P59990 96 aa8.91□□□□□ -0.98
PVT1-219ENST00000523427 C10orf95Q9H7T3 257 aa8.91□□□□□ -0.98
PVT1-219ENST00000523427 LCE3AQ5TA76 89 aa8.86□□□□□ -0.99
PVT1-219ENST00000523427 A0A1B0GU33 70 aa8.83□□□□□ -1
PVT1-219ENST00000523427 COA5Q86WW8 74 aa8.82□□□□□ -1
PVT1-219ENST00000523427 KRTAP4-7Q9BYR0 210 aa8.77□□□□□ -1.01
PVT1-219ENST00000523427 SPRR5A0A1B0GTR4 108 aa8.72□□□□□ -1.01
PVT1-219ENST00000523427 KRTAP20-2Q3LI61 65 aa8.71□□□□□ -1.02
PVT1-219ENST00000523427 TNP1P09430 55 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms