RNA–Protein interactions for RNA: ENST00000522905.1

MCPH1-207, Transcript of microcephalin 1, humanhuman

TSL 2 BASIC

Gene MCPH1, Length 2,049 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-207ENST00000522905 SACSQ9NZJ4 4579 aa6.26□□□□□ -1.41
MCPH1-207ENST00000522905 KRTAP3-1Q9BYR8 98 aa6.26□□□□□ -1.41
MCPH1-207ENST00000522905 HERC2O95714 4834 aa6.25□□□□□ -1.41
MCPH1-207ENST00000522905 DNAH8Q96JB1 4490 aa6.23□□□□□ -1.41
MCPH1-207ENST00000522905 COL7A1Q02388 2944 aa6.23□□□□□ -1.41
MCPH1-207ENST00000522905 FLG2Q5D862 2391 aaPredicted RBP6.23□□□□□ -1.41
MCPH1-207ENST00000522905 LUZP6Q538Z0 58 aa6.22□□□□□ -1.41
MCPH1-207ENST00000522905 KRTAP9-8Q9BYQ0 159 aa6.22□□□□□ -1.41
MCPH1-207ENST00000522905 DNAH7Q8WXX0 4024 aa6.19□□□□□ -1.42
MCPH1-207ENST00000522905 FRAS1Q86XX4 4008 aa6.19□□□□□ -1.42
MCPH1-207ENST00000522905 HYDINQ4G0P3 5121 aa6.17□□□□□ -1.42
MCPH1-207ENST00000522905 PLECQ15149 4684 aaKnown RBP6.17□□□□□ -1.42
MCPH1-207ENST00000522905 DNAH17Q9UFH2 4485 aa6.16□□□□□ -1.42
MCPH1-207ENST00000522905 KRTAP10-6P60371 365 aaPredicted RBP6.15□□□□□ -1.42
MCPH1-207ENST00000522905 VPS13DQ5THJ4 4388 aa6.15□□□□□ -1.43
MCPH1-207ENST00000522905 HECTD4Q9Y4D8 3996 aa6.15□□□□□ -1.43
MCPH1-207ENST00000522905 KRTAP1-4P0C5Y4 121 aa6.15□□□□□ -1.43
MCPH1-207ENST00000522905 KRTAP4-5Q9BYR2 181 aa6.15□□□□□ -1.43
MCPH1-207ENST00000522905 STAB2Q8WWQ8 2551 aa6.14□□□□□ -1.43
MCPH1-207ENST00000522905 KRTAP4-11Q9BYQ6 195 aa6.12□□□□□ -1.43
MCPH1-207ENST00000522905 PCLOQ9Y6V0 5065 aa6.11□□□□□ -1.43
MCPH1-207ENST00000522905 S4R3F8 94 aa6.11□□□□□ -1.43
MCPH1-207ENST00000522905 C10orf95Q9H7T3 257 aa6.08□□□□□ -1.44
MCPH1-207ENST00000522905 SEC61BP60468 96 aaKnown RBP6.07□□□□□ -1.44
MCPH1-207ENST00000522905 KRTAP13-4Q3LI77 160 aa6.04□□□□□ -1.44
MCPH1-207ENST00000522905 A0A0D9SG42 100 aa6.04□□□□□ -1.44
MCPH1-207ENST00000522905 STARD9Q9P2P6 4700 aa6.02□□□□□ -1.45
MCPH1-207ENST00000522905 DNAH2Q9P225 4427 aa6□□□□□ -1.45
MCPH1-207ENST00000522905 RYR1P21817 5038 aa6□□□□□ -1.45
MCPH1-207ENST00000522905 M0QZ58 72 aa5.99□□□□□ -1.45
MCPH1-207ENST00000522905 DNAH11Q96DT5 4516 aa5.95□□□□□ -1.46
MCPH1-207ENST00000522905 KRTAP12-1P59990 96 aa5.95□□□□□ -1.46
MCPH1-207ENST00000522905 KRTAP12-2P59991 146 aa5.95□□□□□ -1.46
MCPH1-207ENST00000522905 PLAC4Q8WY50 150 aa5.95□□□□□ -1.46
MCPH1-207ENST00000522905 KMT2AQ03164 3969 aa5.92□□□□□ -1.46
MCPH1-207ENST00000522905 DNAH6Q9C0G6 4158 aa5.91□□□□□ -1.46
MCPH1-207ENST00000522905 DNAH5Q8TE73 4624 aa5.9□□□□□ -1.46
MCPH1-207ENST00000522905 C9orf92A6NGG3 77 aa5.88□□□□□ -1.47
MCPH1-207ENST00000522905 KIAA1109Q2LD37 5005 aa5.88□□□□□ -1.47
MCPH1-207ENST00000522905 J3QL48 77 aa5.87□□□□□ -1.47
MCPH1-207ENST00000522905 KRTAP10-2P60368 255 aa5.86□□□□□ -1.47
MCPH1-207ENST00000522905 PP632Q6XCG6 107 aa5.85□□□□□ -1.47
MCPH1-207ENST00000522905 CAMK2N1Q7Z7J9 78 aa5.85□□□□□ -1.47
MCPH1-207ENST00000522905 A0A1B0GVY2 172 aa5.83□□□□□ -1.48
MCPH1-207ENST00000522905 ABCA13Q86UQ4 5058 aa5.82□□□□□ -1.48
MCPH1-207ENST00000522905 KRTAP10-1P60331 282 aa5.81□□□□□ -1.48
MCPH1-207ENST00000522905 LRP1BQ9NZR2 4599 aa5.8□□□□□ -1.48
MCPH1-207ENST00000522905 DYNC1H1Q14204 4646 aaKnown RBP5.8□□□□□ -1.48
MCPH1-207ENST00000522905 PKD1P98161 4303 aa5.77□□□□□ -1.49
MCPH1-207ENST00000522905 VPS13BQ7Z7G8 4022 aa5.73□□□□□ -1.49
MCPH1-207ENST00000522905 DMBT1Q9UGM3 2413 aaPredicted RBP5.7□□□□□ -1.5
MCPH1-207ENST00000522905 FAT2Q9NYQ8 4349 aa5.69□□□□□ -1.5
MCPH1-207ENST00000522905 HSPG2P98160 4391 aa5.66□□□□□ -1.5
MCPH1-207ENST00000522905 PKHD1L1Q86WI1 4243 aa5.64□□□□□ -1.51
MCPH1-207ENST00000522905 KRTAP23-1A1A580 65 aa5.6□□□□□ -1.51
MCPH1-207ENST00000522905 HERC1Q15751 4861 aa5.59□□□□□ -1.51
MCPH1-207ENST00000522905 PRO2289Q9P1D8 64 aa5.59□□□□□ -1.51
MCPH1-207ENST00000522905 PKHD1P08F94 4074 aa5.57□□□□□ -1.52
MCPH1-207ENST00000522905 UBR4Q5T4S7 5183 aa5.56□□□□□ -1.52
MCPH1-207ENST00000522905 KRTAP10-8P60410 259 aa5.55□□□□□ -1.52
MCPH1-207ENST00000522905 R4GN34 69 aa5.55□□□□□ -1.52
MCPH1-207ENST00000522905 SPRR5A0A1B0GTR4 108 aa5.54□□□□□ -1.52
MCPH1-207ENST00000522905 APOBP04114 4563 aaKnown RBP5.53□□□□□ -1.52
MCPH1-207ENST00000522905 LCE5AQ5TCM9 118 aa5.52□□□□□ -1.53
MCPH1-207ENST00000522905 KRTAP10-4P60372 401 aaPredicted RBP5.5□□□□□ -1.53
MCPH1-207ENST00000522905 INE1O15225 51 aa5.49□□□□□ -1.53
MCPH1-207ENST00000522905 Q5VSD8 79 aa5.48□□□□□ -1.53
MCPH1-207ENST00000522905 SMR3BP02814 79 aaPredicted RBP5.45□□□□□ -1.54
MCPH1-207ENST00000522905 LCE4AQ5TA78 99 aa5.43□□□□□ -1.54
MCPH1-207ENST00000522905 MYCBP2O75592 4640 aa5.41□□□□□ -1.54
MCPH1-207ENST00000522905 LRP1Q07954 4544 aaKnown RBP5.38□□□□□ -1.55
MCPH1-207ENST00000522905 FAT3Q8TDW7 4589 aa5.37□□□□□ -1.55
MCPH1-207ENST00000522905 FAT1Q14517 4588 aa5.37□□□□□ -1.55
MCPH1-207ENST00000522905 TNXBP22105 4242 aa5.37□□□□□ -1.55
MCPH1-207ENST00000522905 HMCN2Q8NDA2 5059 aa5.35□□□□□ -1.55
MCPH1-207ENST00000522905 TNP1P09430 55 aa5.3□□□□□ -1.56
MCPH1-207ENST00000522905 RNF213Q63HN8 5207 aa5.18□□□□□ -1.58
MCPH1-207ENST00000522905 KRTAP9-7A8MTY7 169 aa5.18□□□□□ -1.58
MCPH1-207ENST00000522905 KRTAP9-3Q9BYQ3 159 aa5.11□□□□□ -1.59
MCPH1-207ENST00000522905 MT1HL1P0DM35 61 aa5.07□□□□□ -1.6
MCPH1-207ENST00000522905 CRCT1Q9UGL9 99 aa5□□□□□ -1.61
MCPH1-207ENST00000522905 FAT4Q6V0I7 4981 aa5□□□□□ -1.61
MCPH1-207ENST00000522905 LPAP08519 4548 aa4.99□□□□□ -1.61
MCPH1-207ENST00000522905 LRP2P98164 4655 aa4.97□□□□□ -1.61
MCPH1-207ENST00000522905 MUC17Q685J3 4493 aa4.84□□□□□ -1.63
MCPH1-207ENST00000522905 KRTAP19-4Q3LI73 84 aa4.82□□□□□ -1.64
MCPH1-207ENST00000522905 KRTAP8-1Q8IUC2 63 aa4.82□□□□□ -1.64
MCPH1-207ENST00000522905 MUC2Q02817 5179 aa4.81□□□□□ -1.64
MCPH1-207ENST00000522905 FLGP20930 4061 aaPredicted RBP4.79□□□□□ -1.64
MCPH1-207ENST00000522905 KRTAP19-2Q3LHN2 52 aa4.77□□□□□ -1.65
MCPH1-207ENST00000522905 KRTAP4-1Q9BYQ7 146 aa4.76□□□□□ -1.65
MCPH1-207ENST00000522905 LCE3AQ5TA76 89 aa4.73□□□□□ -1.65
MCPH1-207ENST00000522905 SPRR2GQ9BYE4 73 aa4.72□□□□□ -1.65
MCPH1-207ENST00000522905 KRTAP10-10P60014 251 aa4.62□□□□□ -1.67
MCPH1-207ENST00000522905 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.62□□□□□ -1.67
MCPH1-207ENST00000522905 KRTAP10-12P60413 245 aa4.61□□□□□ -1.67
MCPH1-207ENST00000522905 KRTAP12-3P60328 96 aa4.59□□□□□ -1.67
MCPH1-207ENST00000522905 FSIP2Q5CZC0 6907 aa4.5□□□□□ -1.69
MCPH1-207ENST00000522905 KRTAP10-5P60370 271 aa4.46□□□□□ -1.69
MCPH1-207ENST00000522905 KRTAP19-8Q3LI54 63 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms