RNA–Protein interactions for RNA: ENST00000521545.6

LAPTM4B-203, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4B, Length 915 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-203ENST00000521545 UQCRQO14949 82 aa11.49□□□□□ -0.57
LAPTM4B-203ENST00000521545 FAM240AA0A1B0GVK7 77 aa11.47□□□□□ -0.57
LAPTM4B-203ENST00000521545 CRIPTQ9P021 101 aa11.47□□□□□ -0.57
LAPTM4B-203ENST00000521545 ATOX1O00244 68 aa11.45□□□□□ -0.58
LAPTM4B-203ENST00000521545 H0Y9P7 68 aa11.44□□□□□ -0.58
LAPTM4B-203ENST00000521545 KRTAP10-5P60370 271 aa11.44□□□□□ -0.58
LAPTM4B-203ENST00000521545 IMUPQ9GZP8 106 aa11.44□□□□□ -0.58
LAPTM4B-203ENST00000521545 NDUFC1O43677 76 aa11.41□□□□□ -0.58
LAPTM4B-203ENST00000521545 H0YAA0 97 aa11.3□□□□□ -0.6
LAPTM4B-203ENST00000521545 A8MUN3 132 aa11.29□□□□□ -0.6
LAPTM4B-203ENST00000521545 LINC00643Q86TS7 51 aa11.28□□□□□ -0.6
LAPTM4B-203ENST00000521545 LINC00208Q96KT6 92 aa11.25□□□□□ -0.61
LAPTM4B-203ENST00000521545 ADM2Q7Z4H4 148 aa11.2□□□□□ -0.62
LAPTM4B-203ENST00000521545 MP68P56378 58 aa11.18□□□□□ -0.62
LAPTM4B-203ENST00000521545 NEBP20929 6669 aa11.12□□□□□ -0.63
LAPTM4B-203ENST00000521545 OCR1Q9BZK8 76 aa11.12□□□□□ -0.63
LAPTM4B-203ENST00000521545 MUC12Q9UKN1 5478 aa11.09□□□□□ -0.63
LAPTM4B-203ENST00000521545 KRTAP5-9P26371 169 aa11.08□□□□□ -0.64
LAPTM4B-203ENST00000521545 PRO2289Q9P1D8 64 aa11.01□□□□□ -0.65
LAPTM4B-203ENST00000521545 H3BPC8 53 aa10.99□□□□□ -0.65
LAPTM4B-203ENST00000521545 PLAC4Q8WY50 150 aa10.99□□□□□ -0.65
LAPTM4B-203ENST00000521545 C20orf197Q8N268 126 aa10.96□□□□□ -0.65
LAPTM4B-203ENST00000521545 R4GN34 69 aa10.96□□□□□ -0.65
LAPTM4B-203ENST00000521545 A0A1B0GV90 55 aa10.95□□□□□ -0.66
LAPTM4B-203ENST00000521545 KRTAP20-1Q3LI63 56 aa10.94□□□□□ -0.66
LAPTM4B-203ENST00000521545 J3QR89 54 aa10.9□□□□□ -0.66
LAPTM4B-203ENST00000521545 SCGB1A1P11684 91 aa10.9□□□□□ -0.66
LAPTM4B-203ENST00000521545 KMT2DO14686 5537 aa10.89□□□□□ -0.67
LAPTM4B-203ENST00000521545 P0C880 135 aa10.89□□□□□ -0.67
LAPTM4B-203ENST00000521545 DMAC1Q96GE9 116 aa10.89□□□□□ -0.67
LAPTM4B-203ENST00000521545 MT1XP80297 61 aa10.88□□□□□ -0.67
LAPTM4B-203ENST00000521545 M0QZ58 72 aa10.84□□□□□ -0.67
LAPTM4B-203ENST00000521545 MDN1Q9NU22 5596 aa10.79□□□□□ -0.68
LAPTM4B-203ENST00000521545 SPRR2FQ96RM1 72 aa10.77□□□□□ -0.69
LAPTM4B-203ENST00000521545 KRTAP3-2Q9BYR7 98 aa10.74□□□□□ -0.69
LAPTM4B-203ENST00000521545 LINC01554Q52M75 96 aa10.72□□□□□ -0.69
LAPTM4B-203ENST00000521545 TRAV7A0A075B6U4 112 aa10.69□□□□□ -0.7
LAPTM4B-203ENST00000521545 KRTAP8-1Q8IUC2 63 aa10.69□□□□□ -0.7
LAPTM4B-203ENST00000521545 KRTAP12-2P59991 146 aa10.67□□□□□ -0.7
LAPTM4B-203ENST00000521545 ACYP2P14621 99 aa10.65□□□□□ -0.7
LAPTM4B-203ENST00000521545 SPRR2EP22531 72 aa10.65□□□□□ -0.7
LAPTM4B-203ENST00000521545 SPRR2BP35325 72 aa10.65□□□□□ -0.7
LAPTM4B-203ENST00000521545 SPRR2AP35326 72 aa10.65□□□□□ -0.7
LAPTM4B-203ENST00000521545 KRTAP2-3P0C7H8 128 aa10.63□□□□□ -0.71
LAPTM4B-203ENST00000521545 KRTAP2-4Q9BYR9 128 aa10.63□□□□□ -0.71
LAPTM4B-203ENST00000521545 SPTSSBQ8NFR3 76 aa10.59□□□□□ -0.71
LAPTM4B-203ENST00000521545 SMIM20Q8N5G0 67 aa10.54□□□□□ -0.72
LAPTM4B-203ENST00000521545 MT-ATP8P03928 68 aa10.5□□□□□ -0.73
LAPTM4B-203ENST00000521545 CHKB-CPT1BH3BT56 60 aa10.47□□□□□ -0.73
LAPTM4B-203ENST00000521545 KRTAP4-8A0A0G2JLE6 195 aa10.46□□□□□ -0.73
LAPTM4B-203ENST00000521545 LCE1AQ5T7P2 110 aa10.46□□□□□ -0.73
LAPTM4B-203ENST00000521545 KRTAP4-8Q9BYQ9 185 aa10.46□□□□□ -0.73
LAPTM4B-203ENST00000521545 KRTAP10-7P60409 375 aaPredicted RBP10.38□□□□□ -0.75
LAPTM4B-203ENST00000521545 K7ERU9 68 aa10.37□□□□□ -0.75
LAPTM4B-203ENST00000521545 KRTAP10-12P60413 245 aa10.34□□□□□ -0.75
LAPTM4B-203ENST00000521545 SNURFQ9Y675 71 aa10.32□□□□□ -0.76
LAPTM4B-203ENST00000521545 SPRR2DP22532 72 aa10.3□□□□□ -0.76
LAPTM4B-203ENST00000521545 KRTAP2-2Q9BYT5 123 aa10.28□□□□□ -0.76
LAPTM4B-203ENST00000521545 KRTAP2-1Q9BYU5 128 aa10.28□□□□□ -0.76
LAPTM4B-203ENST00000521545 SPANXA2-OT1Q8N9U9 137 aa10.22□□□□□ -0.77
LAPTM4B-203ENST00000521545 SERP2Q8N6R1 65 aa10.09□□□□□ -0.79
LAPTM4B-203ENST00000521545 KRTAP13-4Q3LI77 160 aa10.07□□□□□ -0.8
LAPTM4B-203ENST00000521545 CAMK2N1Q7Z7J9 78 aa10.07□□□□□ -0.8
LAPTM4B-203ENST00000521545 LCE3BQ5TA77 95 aa10.03□□□□□ -0.8
LAPTM4B-203ENST00000521545 COA5Q86WW8 74 aa9.95□□□□□ -0.82
LAPTM4B-203ENST00000521545 SEC61GP60059 68 aa9.92□□□□□ -0.82
LAPTM4B-203ENST00000521545 SERP1Q9Y6X1 66 aa9.9□□□□□ -0.82
LAPTM4B-203ENST00000521545 A0A0D9SG42 100 aa9.83□□□□□ -0.84
LAPTM4B-203ENST00000521545 SPATA8Q6RVD6 105 aa9.74□□□□□ -0.85
LAPTM4B-203ENST00000521545 A0A1B0GU33 70 aa9.72□□□□□ -0.85
LAPTM4B-203ENST00000521545 COX7CP15954 63 aa9.71□□□□□ -0.86
LAPTM4B-203ENST00000521545 KRTAP19-7Q3SYF9 63 aa9.71□□□□□ -0.86
LAPTM4B-203ENST00000521545 SPINT4Q6UDR6 99 aa9.71□□□□□ -0.86
LAPTM4B-203ENST00000521545 MT1EP04732 61 aa9.66□□□□□ -0.86
LAPTM4B-203ENST00000521545 LCE5AQ5TCM9 118 aa9.66□□□□□ -0.86
LAPTM4B-203ENST00000521545 KRTAP19-3Q7Z4W3 81 aa9.62□□□□□ -0.87
LAPTM4B-203ENST00000521545 H7BZZ5 65 aa9.59□□□□□ -0.87
LAPTM4B-203ENST00000521545 KRTAP12-1P59990 96 aa9.57□□□□□ -0.88
LAPTM4B-203ENST00000521545 CYSTM1Q9H1C7 97 aa9.53□□□□□ -0.88
LAPTM4B-203ENST00000521545 DSTQ03001 7570 aaKnown RBP9.51□□□□□ -0.89
LAPTM4B-203ENST00000521545 SMIM26A0A096LP01 95 aa9.47□□□□□ -0.89
LAPTM4B-203ENST00000521545 A0A1B0GU69 56 aa9.47□□□□□ -0.89
LAPTM4B-203ENST00000521545 KRTAP19-5Q3LI72 72 aa9.46□□□□□ -0.9
LAPTM4B-203ENST00000521545 MT1GP13640 62 aa9.41□□□□□ -0.9
LAPTM4B-203ENST00000521545 PP632Q6XCG6 107 aa9.36□□□□□ -0.91
LAPTM4B-203ENST00000521545 KRTAP4-9Q9BYQ8 210 aa9.35□□□□□ -0.91
LAPTM4B-203ENST00000521545 A8MU10 97 aa9.33□□□□□ -0.92
LAPTM4B-203ENST00000521545 ANAPC13Q9BS18 74 aa9.28□□□□□ -0.92
LAPTM4B-203ENST00000521545 TNP1P09430 55 aa9.23□□□□□ -0.93
LAPTM4B-203ENST00000521545 MT1MQ8N339 61 aa9.21□□□□□ -0.94
LAPTM4B-203ENST00000521545 MT1LQ93083 61 aa9.21□□□□□ -0.94
LAPTM4B-203ENST00000521545 LCE3AQ5TA76 89 aa9.17□□□□□ -0.94
LAPTM4B-203ENST00000521545 PRR15LQ9BU68 103 aa9.17□□□□□ -0.94
LAPTM4B-203ENST00000521545 C10orf95Q9H7T3 257 aa9.17□□□□□ -0.94
LAPTM4B-203ENST00000521545 GPR98Q8WXG9 6306 aa9.12□□□□□ -0.95
LAPTM4B-203ENST00000521545 LCE1DQ5T752 114 aa9.11□□□□□ -0.95
LAPTM4B-203ENST00000521545 LCE4AQ5TA78 99 aa9.1□□□□□ -0.95
LAPTM4B-203ENST00000521545 CCDC179H3BU77 68 aa9.07□□□□□ -0.96
LAPTM4B-203ENST00000521545 ATP5EP56381 51 aaPredicted RBP9.07□□□□□ -0.96
LAPTM4B-203ENST00000521545 MT4P47944 62 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms