RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 GTF2H5Q6ZYL4 71 aa8.53□□□□□ -1.04
PABPC1-215ENST00000520804 IMUPQ9GZP8 106 aa8.53□□□□□ -1.04
PABPC1-215ENST00000520804 KRTAP20-1Q3LI63 56 aa8.52□□□□□ -1.05
PABPC1-215ENST00000520804 ETDBQ3ZM63 59 aa8.52□□□□□ -1.05
PABPC1-215ENST00000520804 KMT2DO14686 5537 aa8.48□□□□□ -1.05
PABPC1-215ENST00000520804 H0YAA0 97 aa8.45□□□□□ -1.06
PABPC1-215ENST00000520804 NDUFC1O43677 76 aa8.44□□□□□ -1.06
PABPC1-215ENST00000520804 MDN1Q9NU22 5596 aa8.44□□□□□ -1.06
PABPC1-215ENST00000520804 UQCRQO14949 82 aa8.39□□□□□ -1.07
PABPC1-215ENST00000520804 H0Y9P7 68 aa8.38□□□□□ -1.07
PABPC1-215ENST00000520804 ATOX1O00244 68 aa8.37□□□□□ -1.07
PABPC1-215ENST00000520804 ACYP1P07311 99 aa8.37□□□□□ -1.07
PABPC1-215ENST00000520804 ATP5EP2Q5VTU8 51 aa8.35□□□□□ -1.07
PABPC1-215ENST00000520804 HIST1H4AP62805 103 aaKnown RBP8.34□□□□□ -1.07
PABPC1-215ENST00000520804 ADM2Q7Z4H4 148 aa8.34□□□□□ -1.07
PABPC1-215ENST00000520804 A8MUN3 132 aa8.32□□□□□ -1.08
PABPC1-215ENST00000520804 FAM240AA0A1B0GVK7 77 aa8.3□□□□□ -1.08
PABPC1-215ENST00000520804 PRO2289Q9P1D8 64 aa8.29□□□□□ -1.08
PABPC1-215ENST00000520804 MT1XP80297 61 aa8.26□□□□□ -1.09
PABPC1-215ENST00000520804 SPRR2FQ96RM1 72 aa8.25□□□□□ -1.09
PABPC1-215ENST00000520804 PCP4L1A6NKN8 68 aa8.24□□□□□ -1.09
PABPC1-215ENST00000520804 KRTAP2-3P0C7H8 128 aa8.24□□□□□ -1.09
PABPC1-215ENST00000520804 KRTAP2-4Q9BYR9 128 aa8.24□□□□□ -1.09
PABPC1-215ENST00000520804 LINC00208Q96KT6 92 aa8.22□□□□□ -1.09
PABPC1-215ENST00000520804 PLAC4Q8WY50 150 aa8.21□□□□□ -1.1
PABPC1-215ENST00000520804 SPRR2EP22531 72 aa8.18□□□□□ -1.1
PABPC1-215ENST00000520804 SPRR2BP35325 72 aa8.18□□□□□ -1.1
PABPC1-215ENST00000520804 SPRR2AP35326 72 aa8.18□□□□□ -1.1
PABPC1-215ENST00000520804 LINC00643Q86TS7 51 aa8.15□□□□□ -1.1
PABPC1-215ENST00000520804 R4GN34 69 aa8.15□□□□□ -1.1
PABPC1-215ENST00000520804 KRTAP8-1Q8IUC2 63 aa8.14□□□□□ -1.11
PABPC1-215ENST00000520804 MP68P56378 58 aa8.13□□□□□ -1.11
PABPC1-215ENST00000520804 P0C880 135 aa8.12□□□□□ -1.11
PABPC1-215ENST00000520804 KRTAP12-2P59991 146 aa8.12□□□□□ -1.11
PABPC1-215ENST00000520804 OCR1Q9BZK8 76 aa8.12□□□□□ -1.11
PABPC1-215ENST00000520804 C20orf197Q8N268 126 aa8.09□□□□□ -1.11
PABPC1-215ENST00000520804 M0QZ58 72 aa8.07□□□□□ -1.12
PABPC1-215ENST00000520804 LCE1AQ5T7P2 110 aa8.06□□□□□ -1.12
PABPC1-215ENST00000520804 DMAC1Q96GE9 116 aa8.01□□□□□ -1.13
PABPC1-215ENST00000520804 KRTAP3-2Q9BYR7 98 aa8.01□□□□□ -1.13
PABPC1-215ENST00000520804 H3BPC8 53 aa7.99□□□□□ -1.13
PABPC1-215ENST00000520804 KRTAP4-8A0A0G2JLE6 195 aa7.98□□□□□ -1.13
PABPC1-215ENST00000520804 KRTAP4-8Q9BYQ9 185 aa7.98□□□□□ -1.13
PABPC1-215ENST00000520804 KRTAP2-2Q9BYT5 123 aa7.97□□□□□ -1.13
PABPC1-215ENST00000520804 KRTAP2-1Q9BYU5 128 aa7.97□□□□□ -1.13
PABPC1-215ENST00000520804 LINC01554Q52M75 96 aa7.96□□□□□ -1.14
PABPC1-215ENST00000520804 SPRR2DP22532 72 aa7.91□□□□□ -1.14
PABPC1-215ENST00000520804 KRTAP10-7P60409 375 aaPredicted RBP7.88□□□□□ -1.15
PABPC1-215ENST00000520804 KRTAP10-12P60413 245 aa7.85□□□□□ -1.15
PABPC1-215ENST00000520804 TRAV7A0A075B6U4 112 aa7.83□□□□□ -1.16
PABPC1-215ENST00000520804 SCGB1A1P11684 91 aa7.83□□□□□ -1.16
PABPC1-215ENST00000520804 A0A1B0GV90 55 aa7.77□□□□□ -1.17
PABPC1-215ENST00000520804 ACYP2P14621 99 aa7.76□□□□□ -1.17
PABPC1-215ENST00000520804 MT-ATP8P03928 68 aa7.75□□□□□ -1.17
PABPC1-215ENST00000520804 J3QR89 54 aa7.73□□□□□ -1.17
PABPC1-215ENST00000520804 LCE3BQ5TA77 95 aa7.73□□□□□ -1.17
PABPC1-215ENST00000520804 SPTSSBQ8NFR3 76 aa7.71□□□□□ -1.18
PABPC1-215ENST00000520804 CHKB-CPT1BH3BT56 60 aa7.6□□□□□ -1.19
PABPC1-215ENST00000520804 SMIM20Q8N5G0 67 aa7.56□□□□□ -1.2
PABPC1-215ENST00000520804 KRTAP13-4Q3LI77 160 aa7.49□□□□□ -1.21
PABPC1-215ENST00000520804 CAMK2N1Q7Z7J9 78 aa7.45□□□□□ -1.22
PABPC1-215ENST00000520804 SNURFQ9Y675 71 aa7.45□□□□□ -1.22
PABPC1-215ENST00000520804 DSTQ03001 7570 aaKnown RBP7.42□□□□□ -1.22
PABPC1-215ENST00000520804 KRTAP19-7Q3SYF9 63 aa7.4□□□□□ -1.22
PABPC1-215ENST00000520804 SPANXA2-OT1Q8N9U9 137 aa7.4□□□□□ -1.22
PABPC1-215ENST00000520804 LCE5AQ5TCM9 118 aa7.39□□□□□ -1.23
PABPC1-215ENST00000520804 MT1EP04732 61 aa7.34□□□□□ -1.23
PABPC1-215ENST00000520804 KRTAP19-3Q7Z4W3 81 aa7.33□□□□□ -1.24
PABPC1-215ENST00000520804 GPR98Q8WXG9 6306 aa7.32□□□□□ -1.24
PABPC1-215ENST00000520804 K7ERU9 68 aa7.31□□□□□ -1.24
PABPC1-215ENST00000520804 KRTAP4-9Q9BYQ8 210 aa7.25□□□□□ -1.25
PABPC1-215ENST00000520804 A0A0D9SG42 100 aa7.22□□□□□ -1.25
PABPC1-215ENST00000520804 SERP2Q8N6R1 65 aa7.22□□□□□ -1.25
PABPC1-215ENST00000520804 COA5Q86WW8 74 aa7.21□□□□□ -1.26
PABPC1-215ENST00000520804 SEC61GP60059 68 aa7.18□□□□□ -1.26
PABPC1-215ENST00000520804 SERP1Q9Y6X1 66 aa7.18□□□□□ -1.26
PABPC1-215ENST00000520804 CYSTM1Q9H1C7 97 aa7.16□□□□□ -1.26
PABPC1-215ENST00000520804 SPATA8Q6RVD6 105 aa7.15□□□□□ -1.26
PABPC1-215ENST00000520804 SPINT4Q6UDR6 99 aa7.14□□□□□ -1.27
PABPC1-215ENST00000520804 MT1GP13640 62 aa7.13□□□□□ -1.27
PABPC1-215ENST00000520804 KRTAP19-5Q3LI72 72 aa7.13□□□□□ -1.27
PABPC1-215ENST00000520804 A0A1B0GU33 70 aa7.09□□□□□ -1.27
PABPC1-215ENST00000520804 KRTAP12-1P59990 96 aa7.08□□□□□ -1.28
PABPC1-215ENST00000520804 LCE1DQ5T752 114 aa7.06□□□□□ -1.28
PABPC1-215ENST00000520804 PP632Q6XCG6 107 aa7.06□□□□□ -1.28
PABPC1-215ENST00000520804 MT1MQ8N339 61 aa7□□□□□ -1.29
PABPC1-215ENST00000520804 LCE4AQ5TA78 99 aa6.99□□□□□ -1.29
PABPC1-215ENST00000520804 MT1LQ93083 61 aa6.97□□□□□ -1.29
PABPC1-215ENST00000520804 MT4P47944 62 aa6.94□□□□□ -1.3
PABPC1-215ENST00000520804 HMCN1Q96RW7 5635 aa6.93□□□□□ -1.3
PABPC1-215ENST00000520804 COX7CP15954 63 aa6.91□□□□□ -1.3
PABPC1-215ENST00000520804 SMIM26A0A096LP01 95 aa6.89□□□□□ -1.31
PABPC1-215ENST00000520804 H7BZZ5 65 aa6.89□□□□□ -1.31
PABPC1-215ENST00000520804 A0A1B0GU69 56 aa6.85□□□□□ -1.31
PABPC1-215ENST00000520804 LCE3AQ5TA76 89 aa6.85□□□□□ -1.31
PABPC1-215ENST00000520804 KRTAP4-3Q9BYR4 195 aa6.85□□□□□ -1.31
PABPC1-215ENST00000520804 C10orf95Q9H7T3 257 aa6.85□□□□□ -1.31
PABPC1-215ENST00000520804 A8MU10 97 aa6.84□□□□□ -1.31
PABPC1-215ENST00000520804 KRTAP5-4Q6L8H1 288 aa6.83□□□□□ -1.32
PABPC1-215ENST00000520804 TNP1P09430 55 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms