RNA–Protein interactions for RNA: ENST00000520371.5

CCNC-209, Transcript of cyclin C, humanhuman

TSL 5 BASIC

Gene CCNC, Length 2,186 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-209ENST00000520371 KRTAP3-3Q9BYR6 98 aa8.45□□□□□ -1.06
CCNC-209ENST00000520371 S4R3F8 94 aa8.45□□□□□ -1.06
CCNC-209ENST00000520371 KMT2CQ8NEZ4 4911 aaKnown RBP8.42□□□□□ -1.06
CCNC-209ENST00000520371 LRP1Q07954 4544 aaKnown RBP8.4□□□□□ -1.06
CCNC-209ENST00000520371 KRTAP10-6P60371 365 aaPredicted RBP8.39□□□□□ -1.07
CCNC-209ENST00000520371 HSPG2P98160 4391 aa8.37□□□□□ -1.07
CCNC-209ENST00000520371 KRTAP25-1Q3LHN0 102 aa8.35□□□□□ -1.07
CCNC-209ENST00000520371 MT1HL1P0DM35 61 aa8.33□□□□□ -1.08
CCNC-209ENST00000520371 KRTAP3-2Q9BYR7 98 aa8.33□□□□□ -1.08
CCNC-209ENST00000520371 RYR1P21817 5038 aa8.31□□□□□ -1.08
CCNC-209ENST00000520371 ROMO1P60602 79 aa8.27□□□□□ -1.09
CCNC-209ENST00000520371 LCE2DQ5TA82 110 aaPredicted RBP8.27□□□□□ -1.09
CCNC-209ENST00000520371 TPRXLQ17RH7 258 aa8.26□□□□□ -1.09
CCNC-209ENST00000520371 KRTAP13-4Q3LI77 160 aa8.25□□□□□ -1.09
CCNC-209ENST00000520371 KRTAP17-1Q9BYP8 105 aa8.24□□□□□ -1.09
CCNC-209ENST00000520371 DMBT1Q9UGM3 2413 aaPredicted RBP8.23□□□□□ -1.09
CCNC-209ENST00000520371 A0A0D9SG42 100 aa8.21□□□□□ -1.09
CCNC-209ENST00000520371 P0C880 135 aa8.2□□□□□ -1.1
CCNC-209ENST00000520371 RYR3Q15413 4870 aa8.15□□□□□ -1.1
CCNC-209ENST00000520371 MYCBP2O75592 4640 aa8.13□□□□□ -1.11
CCNC-209ENST00000520371 M0QZ58 72 aa8.09□□□□□ -1.11
CCNC-209ENST00000520371 CRIPTQ9P021 101 aa8.08□□□□□ -1.12
CCNC-209ENST00000520371 KIAA1109Q2LD37 5005 aa8.07□□□□□ -1.12
CCNC-209ENST00000520371 KRTAP12-2P59991 146 aa8.02□□□□□ -1.13
CCNC-209ENST00000520371 KRTAP12-1P59990 96 aa8□□□□□ -1.13
CCNC-209ENST00000520371 SPINT4Q6UDR6 99 aa7.98□□□□□ -1.13
CCNC-209ENST00000520371 SEC61BP60468 96 aaKnown RBP7.98□□□□□ -1.13
CCNC-209ENST00000520371 LRP2P98164 4655 aa7.94□□□□□ -1.14
CCNC-209ENST00000520371 LPAP08519 4548 aa7.92□□□□□ -1.14
CCNC-209ENST00000520371 H3BS24 57 aa7.91□□□□□ -1.14
CCNC-209ENST00000520371 KRTAP4-5Q9BYR2 181 aa7.84□□□□□ -1.15
CCNC-209ENST00000520371 EPPK1P58107 5090 aaKnown RBP7.84□□□□□ -1.15
CCNC-209ENST00000520371 R4GN34 69 aa7.84□□□□□ -1.15
CCNC-209ENST00000520371 C10orf95Q9H7T3 257 aa7.83□□□□□ -1.16
CCNC-209ENST00000520371 J3QL48 77 aa7.78□□□□□ -1.16
CCNC-209ENST00000520371 ABCA13Q86UQ4 5058 aa7.77□□□□□ -1.16
CCNC-209ENST00000520371 MUC17Q685J3 4493 aa7.69□□□□□ -1.18
CCNC-209ENST00000520371 KRTAP4-1Q9BYQ7 146 aa7.69□□□□□ -1.18
CCNC-209ENST00000520371 LORP23490 312 aaPredicted RBP7.6□□□□□ -1.19
CCNC-209ENST00000520371 KRTAP19-2Q3LHN2 52 aa7.6□□□□□ -1.19
CCNC-209ENST00000520371 KRTAP15-1Q3LI76 137 aa7.58□□□□□ -1.2
CCNC-209ENST00000520371 HERC2O95714 4834 aa7.48□□□□□ -1.21
CCNC-209ENST00000520371 CAMK2N1Q7Z7J9 78 aa7.44□□□□□ -1.22
CCNC-209ENST00000520371 PP632Q6XCG6 107 aa7.41□□□□□ -1.22
CCNC-209ENST00000520371 NDUFAF8A1L188 74 aa7.36□□□□□ -1.23
CCNC-209ENST00000520371 BIRC6Q9NR09 4857 aa7.35□□□□□ -1.23
CCNC-209ENST00000520371 FLGP20930 4061 aaPredicted RBP7.33□□□□□ -1.24
CCNC-209ENST00000520371 PLAC4Q8WY50 150 aa7.31□□□□□ -1.24
CCNC-209ENST00000520371 HERC1Q15751 4861 aa7.21□□□□□ -1.26
CCNC-209ENST00000520371 TNP1P09430 55 aa7.2□□□□□ -1.26
CCNC-209ENST00000520371 KRTAP23-1A1A580 65 aa7.19□□□□□ -1.26
CCNC-209ENST00000520371 MUC2Q02817 5179 aa7.18□□□□□ -1.26
CCNC-209ENST00000520371 LCE2CQ5TA81 110 aa7.13□□□□□ -1.27
CCNC-209ENST00000520371 HMCN2Q8NDA2 5059 aa7.12□□□□□ -1.27
CCNC-209ENST00000520371 SPRR2GQ9BYE4 73 aa7.1□□□□□ -1.27
CCNC-209ENST00000520371 M0R2T5 61 aa7.03□□□□□ -1.28
CCNC-209ENST00000520371 LUZP6Q538Z0 58 aa7.03□□□□□ -1.28
CCNC-209ENST00000520371 PCLOQ9Y6V0 5065 aa7□□□□□ -1.29
CCNC-209ENST00000520371 KRTAP19-1Q8IUB9 90 aa6.99□□□□□ -1.29
CCNC-209ENST00000520371 LCE2BO14633 110 aa6.97□□□□□ -1.29
CCNC-209ENST00000520371 MT1HP80294 61 aa6.96□□□□□ -1.29
CCNC-209ENST00000520371 KRTAP10-10P60014 251 aa6.88□□□□□ -1.31
CCNC-209ENST00000520371 MT2AP02795 61 aa6.86□□□□□ -1.31
CCNC-209ENST00000520371 MT1FP04733 61 aa6.84□□□□□ -1.32
CCNC-209ENST00000520371 FAT4Q6V0I7 4981 aa6.83□□□□□ -1.32
CCNC-209ENST00000520371 SPRR5A0A1B0GTR4 108 aa6.81□□□□□ -1.32
CCNC-209ENST00000520371 KRTAP9-8Q9BYQ0 159 aa6.81□□□□□ -1.32
CCNC-209ENST00000520371 RNF213Q63HN8 5207 aa6.79□□□□□ -1.32
CCNC-209ENST00000520371 KRTAP19-8Q3LI54 63 aa6.79□□□□□ -1.32
CCNC-209ENST00000520371 LCE3AQ5TA76 89 aa6.72□□□□□ -1.33
CCNC-209ENST00000520371 A0A0A0MQY5 61 aa6.68□□□□□ -1.34
CCNC-209ENST00000520371 UBR4Q5T4S7 5183 aa6.67□□□□□ -1.34
CCNC-209ENST00000520371 MT1BP07438 61 aa6.63□□□□□ -1.35
CCNC-209ENST00000520371 KRTAP8-1Q8IUC2 63 aa6.62□□□□□ -1.35
CCNC-209ENST00000520371 KRTAP10-5P60370 271 aa6.6□□□□□ -1.35
CCNC-209ENST00000520371 MT1XP80297 61 aa6.58□□□□□ -1.36
CCNC-209ENST00000520371 LCE2AQ5TA79 106 aaPredicted RBP6.58□□□□□ -1.36
CCNC-209ENST00000520371 KRTAP9-3Q9BYQ3 159 aa6.53□□□□□ -1.36
CCNC-209ENST00000520371 KRTAP10-12P60413 245 aa6.51□□□□□ -1.37
CCNC-209ENST00000520371 PRO2289Q9P1D8 64 aa6.48□□□□□ -1.37
CCNC-209ENST00000520371 KRTAP12-3P60328 96 aa6.45□□□□□ -1.38
CCNC-209ENST00000520371 KRTAP10-7P60409 375 aaPredicted RBP6.37□□□□□ -1.39
CCNC-209ENST00000520371 KRTAP19-5Q3LI72 72 aa6.13□□□□□ -1.43
CCNC-209ENST00000520371 LOC100996750A0A140TA64 210 aa6.12□□□□□ -1.43
CCNC-209ENST00000520371 KRTAP4-6Q9BYQ5 205 aa6.12□□□□□ -1.43
CCNC-209ENST00000520371 INE1O15225 51 aa6.08□□□□□ -1.44
CCNC-209ENST00000520371 LCE3CQ5T5A8 94 aa6.08□□□□□ -1.44
CCNC-209ENST00000520371 KRTAP19-4Q3LI73 84 aa5.96□□□□□ -1.46
CCNC-209ENST00000520371 KRTAP4-8A0A0G2JLE6 195 aa5.93□□□□□ -1.46
CCNC-209ENST00000520371 KRTAP4-8Q9BYQ9 185 aa5.93□□□□□ -1.46
CCNC-209ENST00000520371 KRTAP19-7Q3SYF9 63 aa5.86□□□□□ -1.47
CCNC-209ENST00000520371 USH2AO75445 5202 aa5.86□□□□□ -1.47
CCNC-209ENST00000520371 KMT2DO14686 5537 aa5.78□□□□□ -1.48
CCNC-209ENST00000520371 KRTAP9-6A8MVA2 160 aa5.74□□□□□ -1.49
CCNC-209ENST00000520371 MT1EP04732 61 aa5.72□□□□□ -1.49
CCNC-209ENST00000520371 MT1LQ93083 61 aa5.72□□□□□ -1.49
CCNC-209ENST00000520371 KRTAP19-6Q3LI70 58 aa5.67□□□□□ -1.5
CCNC-209ENST00000520371 SSPOA2VEC9 5147 aa5.65□□□□□ -1.51
CCNC-209ENST00000520371 KRTAP2-3P0C7H8 128 aa5.65□□□□□ -1.51
CCNC-209ENST00000520371 KRTAP4-7Q9BYR0 210 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms