RNA–Protein interactions for RNA: ENST00000519895.5

MCF2-208, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,346 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-208ENST00000519895 A0A1B0GVX0 72 aa1.52□□□□□ -2.17
MCF2-208ENST00000519895 K7ERJ3 54 aa1.52□□□□□ -2.17
MCF2-208ENST00000519895 LUZP6Q538Z0 58 aa1.52□□□□□ -2.17
MCF2-208ENST00000519895 ANAPC11Q9NYG5 84 aa1.52□□□□□ -2.17
MCF2-208ENST00000519895 NDUFB1O75438 58 aa1.51□□□□□ -2.17
MCF2-208ENST00000519895 PRR15Q8IV56 129 aa1.51□□□□□ -2.17
MCF2-208ENST00000519895 DEFB105AQ8NG35 78 aa1.51□□□□□ -2.17
MCF2-208ENST00000519895 SPCS1Q9Y6A9 102 aa1.51□□□□□ -2.17
MCF2-208ENST00000519895 H3BUT2 72 aa1.51□□□□□ -2.17
MCF2-208ENST00000519895 LCE1EQ5T753 118 aa1.51□□□□□ -2.17
MCF2-208ENST00000519895 IMUPQ9GZP8 106 aa1.5□□□□□ -2.17
MCF2-208ENST00000519895 TP53AIP1Q9HCN2 124 aa1.5□□□□□ -2.17
MCF2-208ENST00000519895 A0A087WSZ3 146 aa1.5□□□□□ -2.17
MCF2-208ENST00000519895 IGKV2-30P06310 120 aa1.5□□□□□ -2.17
MCF2-208ENST00000519895 MUC5ACP98088 5654 aa1.5□□□□□ -2.17
MCF2-208ENST00000519895 NAA38Q9BRA0 125 aaKnown RBP1.5□□□□□ -2.17
MCF2-208ENST00000519895 KTN1-AS1Q86SY8 53 aa1.49□□□□□ -2.17
MCF2-208ENST00000519895 NREPQ16612 68 aa1.49□□□□□ -2.17
MCF2-208ENST00000519895 H3BPC8 53 aa1.48□□□□□ -2.17
MCF2-208ENST00000519895 KRTAP19-2Q3LHN2 52 aa1.48□□□□□ -2.17
MCF2-208ENST00000519895 ATP11AUNQ6ZP68 121 aa1.48□□□□□ -2.17
MCF2-208ENST00000519895 ZCCHC13Q8WW36 166 aaKnown RBP1.48□□□□□ -2.17
MCF2-208ENST00000519895 UBL5Q9BZL1 73 aa1.48□□□□□ -2.17
MCF2-208ENST00000519895 IGKV4-1P06312 121 aa1.48□□□□□ -2.17
MCF2-208ENST00000519895 SPANXA2-OT1Q8N9U9 137 aa1.48□□□□□ -2.17
MCF2-208ENST00000519895 MMP24-AS1A0A0U1RRL7 71 aa1.48□□□□□ -2.17
MCF2-208ENST00000519895 K7ERU9 68 aa1.48□□□□□ -2.17
MCF2-208ENST00000519895 DSCR10P59022 87 aa1.48□□□□□ -2.17
MCF2-208ENST00000519895 MRPL34Q9BQ48 92 aaKnown RBP1.48□□□□□ -2.17
MCF2-208ENST00000519895 NDUFAF8A1L188 74 aa1.47□□□□□ -2.17
MCF2-208ENST00000519895 SPRR2EP22531 72 aa1.47□□□□□ -2.17
MCF2-208ENST00000519895 SPRR2BP35325 72 aa1.47□□□□□ -2.17
MCF2-208ENST00000519895 SPRR2AP35326 72 aa1.47□□□□□ -2.17
MCF2-208ENST00000519895 LCE1AQ5T7P2 110 aa1.47□□□□□ -2.17
MCF2-208ENST00000519895 LCA10Q71F78 164 aa1.47□□□□□ -2.17
MCF2-208ENST00000519895 J3QR89 54 aa1.47□□□□□ -2.17
MCF2-208ENST00000519895 IGKV3D-7A0A0C4DH55 119 aa1.46□□□□□ -2.17
MCF2-208ENST00000519895 A6NED7 52 aa1.46□□□□□ -2.17
MCF2-208ENST00000519895 LINC00643Q86TS7 51 aa1.46□□□□□ -2.17
MCF2-208ENST00000519895 Q5W150 140 aa1.46□□□□□ -2.18
MCF2-208ENST00000519895 C14orf132Q9NPU4 83 aa1.46□□□□□ -2.18
MCF2-208ENST00000519895 ATOX1O00244 68 aa1.46□□□□□ -2.18
MCF2-208ENST00000519895 UQCRQO14949 82 aa1.46□□□□□ -2.18
MCF2-208ENST00000519895 HRES1P13985 223 aa1.46□□□□□ -2.18
MCF2-208ENST00000519895 BRK1Q8WUW1 75 aa1.46□□□□□ -2.18
MCF2-208ENST00000519895 RETNLBQ9BQ08 111 aa1.46□□□□□ -2.18
MCF2-208ENST00000519895 hDV103S1A0JD37 113 aa1.45□□□□□ -2.18
MCF2-208ENST00000519895 SPRR2DP22532 72 aa1.45□□□□□ -2.18
MCF2-208ENST00000519895 HIST1H4AP62805 103 aaKnown RBP1.45□□□□□ -2.18
MCF2-208ENST00000519895 LINC01554Q52M75 96 aa1.45□□□□□ -2.18
MCF2-208ENST00000519895 HCG22E2RYF7 251 aa1.45□□□□□ -2.18
MCF2-208ENST00000519895 PCOTHQ58A44 107 aa1.45□□□□□ -2.18
MCF2-208ENST00000519895 IGKV2D-30A0A075B6S6 120 aa1.45□□□□□ -2.18
MCF2-208ENST00000519895 FAM236AA0A1B0GUQ0 79 aa1.45□□□□□ -2.18
MCF2-208ENST00000519895 FAM236BA0A1B0GV22 79 aa1.45□□□□□ -2.18
MCF2-208ENST00000519895 K7EQZ3 153 aa1.45□□□□□ -2.18
MCF2-208ENST00000519895 KRTAP5-1Q6L8H4 278 aa1.45□□□□□ -2.18
MCF2-208ENST00000519895 A0A0G2JQZ4 141 aa1.44□□□□□ -2.18
MCF2-208ENST00000519895 LOC101927531A0A1B0GV80 90 aa1.44□□□□□ -2.18
MCF2-208ENST00000519895 KRTAP4-1Q9BYQ7 146 aa1.44□□□□□ -2.18
MCF2-208ENST00000519895 FLGP20930 4061 aaPredicted RBP1.44□□□□□ -2.18
MCF2-208ENST00000519895 K7ERS5 55 aa1.43□□□□□ -2.18
MCF2-208ENST00000519895 CASC2Q6XLA1 102 aa1.43□□□□□ -2.18
MCF2-208ENST00000519895 C7orf65Q6ZTY9 151 aa1.43□□□□□ -2.18
MCF2-208ENST00000519895 H0YAA0 97 aa1.42□□□□□ -2.18
MCF2-208ENST00000519895 KRTAP4-4Q9BYR3 166 aa1.42□□□□□ -2.18
MCF2-208ENST00000519895 C9orf92A6NGG3 77 aa1.41□□□□□ -2.18
MCF2-208ENST00000519895 CCDC179H3BU77 68 aa1.41□□□□□ -2.18
MCF2-208ENST00000519895 ETDBQ3ZM63 59 aa1.41□□□□□ -2.18
MCF2-208ENST00000519895 H1FX-AS1Q4G0G2 97 aa1.41□□□□□ -2.18
MCF2-208ENST00000519895 COX6B2Q6YFQ2 88 aa1.41□□□□□ -2.18
MCF2-208ENST00000519895 C1orf64Q8NEQ6 169 aa1.41□□□□□ -2.18
MCF2-208ENST00000519895 DEFB116Q30KQ4 102 aa1.41□□□□□ -2.18
MCF2-208ENST00000519895 CRIPTQ9P021 101 aa1.41□□□□□ -2.18
MCF2-208ENST00000519895 SPINK7P58062 85 aa1.4□□□□□ -2.18
MCF2-208ENST00000519895 TRAV22A0A0B4J277 110 aa1.4□□□□□ -2.19
MCF2-208ENST00000519895 CYP4F30PQ9H0H9 118 aa1.39□□□□□ -2.19
MCF2-208ENST00000519895 ATP5EP56381 51 aaPredicted RBP1.38□□□□□ -2.19
MCF2-208ENST00000519895 TRAV7A0A075B6U4 112 aa1.38□□□□□ -2.19
MCF2-208ENST00000519895 M0R2T5 61 aa1.38□□□□□ -2.19
MCF2-208ENST00000519895 OBSCNQ5VST9 7968 aa1.37□□□□□ -2.19
MCF2-208ENST00000519895 A0A1B0GU33 70 aa1.37□□□□□ -2.19
MCF2-208ENST00000519895 TMEM258P61165 79 aa1.37□□□□□ -2.19
MCF2-208ENST00000519895 NDUFC1O43677 76 aa1.36□□□□□ -2.19
MCF2-208ENST00000519895 DMAC1Q96GE9 116 aa1.36□□□□□ -2.19
MCF2-208ENST00000519895 H0Y9P7 68 aa1.35□□□□□ -2.19
MCF2-208ENST00000519895 KRTAP25-1Q3LHN0 102 aa1.35□□□□□ -2.19
MCF2-208ENST00000519895 SPTSSBQ8NFR3 76 aa1.35□□□□□ -2.19
MCF2-208ENST00000519895 C20orf197Q8N268 126 aa1.35□□□□□ -2.19
MCF2-208ENST00000519895 KRTAP19-8Q3LI54 63 aa1.34□□□□□ -2.19
MCF2-208ENST00000519895 CSAG1Q6PB30 78 aa1.34□□□□□ -2.19
MCF2-208ENST00000519895 MT2AP02795 61 aa1.34□□□□□ -2.2
MCF2-208ENST00000519895 KLKP1Q107X0 134 aa1.34□□□□□ -2.2
MCF2-208ENST00000519895 SPRR2GQ9BYE4 73 aa1.34□□□□□ -2.2
MCF2-208ENST00000519895 S4R3F8 94 aa1.34□□□□□ -2.2
MCF2-208ENST00000519895 SERP2Q8N6R1 65 aa1.33□□□□□ -2.2
MCF2-208ENST00000519895 A6NN06 94 aa1.33□□□□□ -2.2
MCF2-208ENST00000519895 ROMO1P60602 79 aa1.33□□□□□ -2.2
MCF2-208ENST00000519895 Q8N9L7 120 aa1.33□□□□□ -2.2
MCF2-208ENST00000519895 ACYP2P14621 99 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms