RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 RPS29P62273 56 aaKnown RBP6.92□□□□□ -1.3
PABPC1-208ENST00000519004 KRTAP12-1P59990 96 aa6.88□□□□□ -1.31
PABPC1-208ENST00000519004 SACSQ9NZJ4 4579 aa6.86□□□□□ -1.31
PABPC1-208ENST00000519004 KRTAP10-1P60331 282 aa6.85□□□□□ -1.31
PABPC1-208ENST00000519004 LCE2DQ5TA82 110 aaPredicted RBP6.81□□□□□ -1.32
PABPC1-208ENST00000519004 PKD1P98161 4303 aa6.79□□□□□ -1.32
PABPC1-208ENST00000519004 FAT2Q9NYQ8 4349 aa6.77□□□□□ -1.33
PABPC1-208ENST00000519004 PKHD1L1Q86WI1 4243 aa6.75□□□□□ -1.33
PABPC1-208ENST00000519004 PLAC4Q8WY50 150 aa6.74□□□□□ -1.33
PABPC1-208ENST00000519004 PKHD1P08F94 4074 aa6.67□□□□□ -1.34
PABPC1-208ENST00000519004 KRTAP10-8P60410 259 aa6.66□□□□□ -1.34
PABPC1-208ENST00000519004 MYCBP2O75592 4640 aa6.63□□□□□ -1.35
PABPC1-208ENST00000519004 APOBP04114 4563 aaKnown RBP6.62□□□□□ -1.35
PABPC1-208ENST00000519004 M0QZ58 72 aa6.59□□□□□ -1.35
PABPC1-208ENST00000519004 LRP1Q07954 4544 aaKnown RBP6.59□□□□□ -1.35
PABPC1-208ENST00000519004 HYDINQ4G0P3 5121 aa6.52□□□□□ -1.37
PABPC1-208ENST00000519004 HSPG2P98160 4391 aa6.51□□□□□ -1.37
PABPC1-208ENST00000519004 SEC61BP60468 96 aaKnown RBP6.51□□□□□ -1.37
PABPC1-208ENST00000519004 FAT3Q8TDW7 4589 aa6.5□□□□□ -1.37
PABPC1-208ENST00000519004 DYNC1H1Q14204 4646 aaKnown RBP6.46□□□□□ -1.38
PABPC1-208ENST00000519004 TNXBP22105 4242 aa6.46□□□□□ -1.38
PABPC1-208ENST00000519004 FAT1Q14517 4588 aa6.45□□□□□ -1.38
PABPC1-208ENST00000519004 SMR3BP02814 79 aaPredicted RBP6.44□□□□□ -1.38
PABPC1-208ENST00000519004 KRTAP10-4P60372 401 aaPredicted RBP6.39□□□□□ -1.39
PABPC1-208ENST00000519004 PP632Q6XCG6 107 aa6.33□□□□□ -1.4
PABPC1-208ENST00000519004 R4GN34 69 aa6.29□□□□□ -1.4
PABPC1-208ENST00000519004 LPAP08519 4548 aa6.24□□□□□ -1.41
PABPC1-208ENST00000519004 SPRR5A0A1B0GTR4 108 aa6.22□□□□□ -1.41
PABPC1-208ENST00000519004 DNHD1Q96M86 4753 aa6.19□□□□□ -1.42
PABPC1-208ENST00000519004 LORP23490 312 aaPredicted RBP6.18□□□□□ -1.42
PABPC1-208ENST00000519004 CAMK2N1Q7Z7J9 78 aa6.18□□□□□ -1.42
PABPC1-208ENST00000519004 PRO2289Q9P1D8 64 aa6.17□□□□□ -1.42
PABPC1-208ENST00000519004 LCE2BO14633 110 aa6.05□□□□□ -1.44
PABPC1-208ENST00000519004 LCE2CQ5TA81 110 aa6.05□□□□□ -1.44
PABPC1-208ENST00000519004 A0A1B0GVY2 172 aa6.03□□□□□ -1.44
PABPC1-208ENST00000519004 LRP2P98164 4655 aa6.01□□□□□ -1.45
PABPC1-208ENST00000519004 KMT2CQ8NEZ4 4911 aaKnown RBP6.01□□□□□ -1.45
PABPC1-208ENST00000519004 LCE2AQ5TA79 106 aaPredicted RBP5.97□□□□□ -1.45
PABPC1-208ENST00000519004 KRTAP23-1A1A580 65 aa5.96□□□□□ -1.45
PABPC1-208ENST00000519004 INE1O15225 51 aa5.94□□□□□ -1.46
PABPC1-208ENST00000519004 TNP1P09430 55 aa5.9□□□□□ -1.46
PABPC1-208ENST00000519004 MUC17Q685J3 4493 aa5.8□□□□□ -1.48
PABPC1-208ENST00000519004 Q5VSD8 79 aa5.8□□□□□ -1.48
PABPC1-208ENST00000519004 MT1HL1P0DM35 61 aa5.79□□□□□ -1.48
PABPC1-208ENST00000519004 KRTAP21-3Q3LHN1 58 aa5.69□□□□□ -1.5
PABPC1-208ENST00000519004 RYR2Q92736 4967 aa5.69□□□□□ -1.5
PABPC1-208ENST00000519004 KRTAP17-1Q9BYP8 105 aa5.67□□□□□ -1.5
PABPC1-208ENST00000519004 RYR1P21817 5038 aa5.63□□□□□ -1.51
PABPC1-208ENST00000519004 KRTAP19-2Q3LHN2 52 aa5.63□□□□□ -1.51
PABPC1-208ENST00000519004 KRTAP4-1Q9BYQ7 146 aa5.63□□□□□ -1.51
PABPC1-208ENST00000519004 FLGP20930 4061 aaPredicted RBP5.61□□□□□ -1.51
PABPC1-208ENST00000519004 LCE3AQ5TA76 89 aa5.57□□□□□ -1.52
PABPC1-208ENST00000519004 HERC1Q15751 4861 aa5.55□□□□□ -1.52
PABPC1-208ENST00000519004 ABCA13Q86UQ4 5058 aa5.52□□□□□ -1.53
PABPC1-208ENST00000519004 KIAA1109Q2LD37 5005 aa5.42□□□□□ -1.54
PABPC1-208ENST00000519004 KRTAP8-1Q8IUC2 63 aa5.42□□□□□ -1.54
PABPC1-208ENST00000519004 RYR3Q15413 4870 aa5.4□□□□□ -1.54
PABPC1-208ENST00000519004 KRTAP10-12P60413 245 aa5.35□□□□□ -1.55
PABPC1-208ENST00000519004 SPRR2GQ9BYE4 73 aa5.31□□□□□ -1.56
PABPC1-208ENST00000519004 KRTAP10-10P60014 251 aa5.29□□□□□ -1.56
PABPC1-208ENST00000519004 KRTAP19-1Q8IUB9 90 aa5.28□□□□□ -1.56
PABPC1-208ENST00000519004 PCLOQ9Y6V0 5065 aa5.27□□□□□ -1.57
PABPC1-208ENST00000519004 KRTAP12-3P60328 96 aa5.25□□□□□ -1.57
PABPC1-208ENST00000519004 MUC2Q02817 5179 aa5.22□□□□□ -1.57
PABPC1-208ENST00000519004 EPPK1P58107 5090 aaKnown RBP5.2□□□□□ -1.58
PABPC1-208ENST00000519004 KRTAP10-5P60370 271 aa5.15□□□□□ -1.58
PABPC1-208ENST00000519004 LOC100996750A0A140TA64 210 aa5.11□□□□□ -1.59
PABPC1-208ENST00000519004 KRTAP4-6Q9BYQ5 205 aa5.11□□□□□ -1.59
PABPC1-208ENST00000519004 KRTAP4-5Q9BYR2 181 aa5.11□□□□□ -1.59
PABPC1-208ENST00000519004 HERC2O95714 4834 aa5.04□□□□□ -1.6
PABPC1-208ENST00000519004 BIRC6Q9NR09 4857 aa5.04□□□□□ -1.6
PABPC1-208ENST00000519004 MT1XP80297 61 aa5.03□□□□□ -1.6
PABPC1-208ENST00000519004 LCE3CQ5T5A8 94 aa4.98□□□□□ -1.61
PABPC1-208ENST00000519004 HMCN2Q8NDA2 5059 aa4.98□□□□□ -1.61
PABPC1-208ENST00000519004 FAT4Q6V0I7 4981 aa4.97□□□□□ -1.61
PABPC1-208ENST00000519004 KRTAP19-8Q3LI54 63 aa4.97□□□□□ -1.61
PABPC1-208ENST00000519004 KRTAP10-7P60409 375 aaPredicted RBP4.96□□□□□ -1.61
PABPC1-208ENST00000519004 KRTAP2-3P0C7H8 128 aa4.95□□□□□ -1.62
PABPC1-208ENST00000519004 KRTAP2-4Q9BYR9 128 aa4.95□□□□□ -1.62
PABPC1-208ENST00000519004 KRTAP2-1Q9BYU5 128 aa4.95□□□□□ -1.62
PABPC1-208ENST00000519004 UBR4Q5T4S7 5183 aa4.95□□□□□ -1.62
PABPC1-208ENST00000519004 MT1FP04733 61 aa4.94□□□□□ -1.62
PABPC1-208ENST00000519004 KRTAP9-6A8MVA2 160 aa4.93□□□□□ -1.62
PABPC1-208ENST00000519004 MT1BP07438 61 aa4.92□□□□□ -1.62
PABPC1-208ENST00000519004 MT2AP02795 61 aa4.89□□□□□ -1.63
PABPC1-208ENST00000519004 KRTAP19-5Q3LI72 72 aa4.85□□□□□ -1.63
PABPC1-208ENST00000519004 M0R2T5 61 aa4.83□□□□□ -1.64
PABPC1-208ENST00000519004 KRTAP9-8Q9BYQ0 159 aa4.79□□□□□ -1.64
PABPC1-208ENST00000519004 MT1HP80294 61 aa4.78□□□□□ -1.64
PABPC1-208ENST00000519004 RNF213Q63HN8 5207 aa4.66□□□□□ -1.66
PABPC1-208ENST00000519004 KRTAP4-7Q9BYR0 210 aa4.63□□□□□ -1.67
PABPC1-208ENST00000519004 KRTAP4-8Q9BYQ9 185 aa4.58□□□□□ -1.68
PABPC1-208ENST00000519004 KMT2DO14686 5537 aa4.56□□□□□ -1.68
PABPC1-208ENST00000519004 KRTAP9-3Q9BYQ3 159 aa4.55□□□□□ -1.68
PABPC1-208ENST00000519004 KRTAP4-8A0A0G2JLE6 195 aa4.51□□□□□ -1.69
PABPC1-208ENST00000519004 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.51□□□□□ -1.69
PABPC1-208ENST00000519004 KRTAP12-4P60329 112 aa4.5□□□□□ -1.69
PABPC1-208ENST00000519004 KRTAP9-2Q9BYQ4 174 aa4.5□□□□□ -1.69
PABPC1-208ENST00000519004 KRTAP19-7Q3SYF9 63 aa4.48□□□□□ -1.69
PABPC1-208ENST00000519004 KRTAP9-6A0A140TA67 174 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms