RNA–Protein interactions for RNA: ENST00000518230.5

ARFGEF1-203, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene ARFGEF1, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-203ENST00000518230 P0C880 135 aa5.17□□□□□ -1.58
ARFGEF1-203ENST00000518230 C20orf166-AS1Q96NR2 134 aa5.17□□□□□ -1.58
ARFGEF1-203ENST00000518230 K7ERS5 55 aa5.17□□□□□ -1.58
ARFGEF1-203ENST00000518230 KRTAP10-4P60372 401 aaPredicted RBP5.15□□□□□ -1.58
ARFGEF1-203ENST00000518230 A0A0D9SG42 100 aa5.12□□□□□ -1.59
ARFGEF1-203ENST00000518230 PKHD1L1Q86WI1 4243 aa5.11□□□□□ -1.59
ARFGEF1-203ENST00000518230 RPS29P62273 56 aaKnown RBP5.11□□□□□ -1.59
ARFGEF1-203ENST00000518230 KRTAP13-4Q3LI77 160 aa5.1□□□□□ -1.59
ARFGEF1-203ENST00000518230 TPRXLQ17RH7 258 aa5.09□□□□□ -1.6
ARFGEF1-203ENST00000518230 KRTAP10-6P60371 365 aaPredicted RBP5.08□□□□□ -1.6
ARFGEF1-203ENST00000518230 RPL37P61927 97 aaKnown RBP5.08□□□□□ -1.6
ARFGEF1-203ENST00000518230 C10orf95Q9H7T3 257 aa5.07□□□□□ -1.6
ARFGEF1-203ENST00000518230 SPINT4Q6UDR6 99 aa5.06□□□□□ -1.6
ARFGEF1-203ENST00000518230 RYR3Q15413 4870 aa5.05□□□□□ -1.6
ARFGEF1-203ENST00000518230 HSPG2P98160 4391 aa5.03□□□□□ -1.6
ARFGEF1-203ENST00000518230 LRP1Q07954 4544 aaKnown RBP5.02□□□□□ -1.61
ARFGEF1-203ENST00000518230 TNXBP22105 4242 aa4.99□□□□□ -1.61
ARFGEF1-203ENST00000518230 KRTAP10-8P60410 259 aa4.97□□□□□ -1.61
ARFGEF1-203ENST00000518230 FAT3Q8TDW7 4589 aa4.97□□□□□ -1.61
ARFGEF1-203ENST00000518230 KRTAP17-1Q9BYP8 105 aa4.96□□□□□ -1.62
ARFGEF1-203ENST00000518230 RYR1P21817 5038 aa4.96□□□□□ -1.62
ARFGEF1-203ENST00000518230 MYCBP2O75592 4640 aa4.95□□□□□ -1.62
ARFGEF1-203ENST00000518230 NDUFAF8A1L188 74 aa4.95□□□□□ -1.62
ARFGEF1-203ENST00000518230 KRTAP12-2P59991 146 aa4.95□□□□□ -1.62
ARFGEF1-203ENST00000518230 Q5VSD8 79 aa4.95□□□□□ -1.62
ARFGEF1-203ENST00000518230 S4R3F8 94 aa4.94□□□□□ -1.62
ARFGEF1-203ENST00000518230 KIAA1109Q2LD37 5005 aa4.93□□□□□ -1.62
ARFGEF1-203ENST00000518230 KRTAP15-1Q3LI76 137 aa4.93□□□□□ -1.62
ARFGEF1-203ENST00000518230 EPPK1P58107 5090 aaKnown RBP4.87□□□□□ -1.63
ARFGEF1-203ENST00000518230 KRTAP12-1P59990 96 aa4.87□□□□□ -1.63
ARFGEF1-203ENST00000518230 XP32Q5T750 250 aa4.83□□□□□ -1.64
ARFGEF1-203ENST00000518230 LPAP08519 4548 aa4.83□□□□□ -1.64
ARFGEF1-203ENST00000518230 MT1HL1P0DM35 61 aa4.82□□□□□ -1.64
ARFGEF1-203ENST00000518230 LRP2P98164 4655 aa4.73□□□□□ -1.65
ARFGEF1-203ENST00000518230 KRTAP4-5Q9BYR2 181 aa4.72□□□□□ -1.65
ARFGEF1-203ENST00000518230 M0QZ58 72 aa4.71□□□□□ -1.66
ARFGEF1-203ENST00000518230 ABCA13Q86UQ4 5058 aa4.71□□□□□ -1.66
ARFGEF1-203ENST00000518230 A0A0A0MQY5 61 aa4.66□□□□□ -1.66
ARFGEF1-203ENST00000518230 LCE2BO14633 110 aa4.62□□□□□ -1.67
ARFGEF1-203ENST00000518230 R4GN34 69 aa4.62□□□□□ -1.67
ARFGEF1-203ENST00000518230 PLAC4Q8WY50 150 aa4.61□□□□□ -1.67
ARFGEF1-203ENST00000518230 LCE2CQ5TA81 110 aa4.6□□□□□ -1.67
ARFGEF1-203ENST00000518230 LORP23490 312 aaPredicted RBP4.59□□□□□ -1.67
ARFGEF1-203ENST00000518230 HERC2O95714 4834 aa4.58□□□□□ -1.68
ARFGEF1-203ENST00000518230 LCE2AQ5TA79 106 aaPredicted RBP4.54□□□□□ -1.68
ARFGEF1-203ENST00000518230 MUC17Q685J3 4493 aa4.5□□□□□ -1.69
ARFGEF1-203ENST00000518230 BIRC6Q9NR09 4857 aa4.5□□□□□ -1.69
ARFGEF1-203ENST00000518230 LUZP6Q538Z0 58 aa4.48□□□□□ -1.69
ARFGEF1-203ENST00000518230 SEC61BP60468 96 aaKnown RBP4.46□□□□□ -1.7
ARFGEF1-203ENST00000518230 KRTAP4-1Q9BYQ7 146 aa4.46□□□□□ -1.7
ARFGEF1-203ENST00000518230 CAMK2N1Q7Z7J9 78 aa4.42□□□□□ -1.7
ARFGEF1-203ENST00000518230 MUC2Q02817 5179 aa4.41□□□□□ -1.7
ARFGEF1-203ENST00000518230 PCLOQ9Y6V0 5065 aa4.39□□□□□ -1.71
ARFGEF1-203ENST00000518230 HERC1Q15751 4861 aa4.38□□□□□ -1.71
ARFGEF1-203ENST00000518230 PP632Q6XCG6 107 aa4.37□□□□□ -1.71
ARFGEF1-203ENST00000518230 KRTAP19-2Q3LHN2 52 aa4.37□□□□□ -1.71
ARFGEF1-203ENST00000518230 HMCN2Q8NDA2 5059 aa4.33□□□□□ -1.72
ARFGEF1-203ENST00000518230 FLGP20930 4061 aaPredicted RBP4.25□□□□□ -1.73
ARFGEF1-203ENST00000518230 TNP1P09430 55 aa4.24□□□□□ -1.73
ARFGEF1-203ENST00000518230 FAT4Q6V0I7 4981 aa4.2□□□□□ -1.74
ARFGEF1-203ENST00000518230 SPRR5A0A1B0GTR4 108 aa4.19□□□□□ -1.74
ARFGEF1-203ENST00000518230 UBR4Q5T4S7 5183 aa4.16□□□□□ -1.74
ARFGEF1-203ENST00000518230 RNF213Q63HN8 5207 aa4.15□□□□□ -1.75
ARFGEF1-203ENST00000518230 KRTAP23-1A1A580 65 aa4.13□□□□□ -1.75
ARFGEF1-203ENST00000518230 LCE3AQ5TA76 89 aa4.05□□□□□ -1.76
ARFGEF1-203ENST00000518230 MT1HP80294 61 aa4.04□□□□□ -1.76
ARFGEF1-203ENST00000518230 M0R2T5 61 aa4□□□□□ -1.77
ARFGEF1-203ENST00000518230 KRTAP19-1Q8IUB9 90 aa4□□□□□ -1.77
ARFGEF1-203ENST00000518230 SPRR2GQ9BYE4 73 aa3.98□□□□□ -1.77
ARFGEF1-203ENST00000518230 KRTAP9-8Q9BYQ0 159 aa3.94□□□□□ -1.78
ARFGEF1-203ENST00000518230 MT2AP02795 61 aa3.94□□□□□ -1.78
ARFGEF1-203ENST00000518230 MT1FP04733 61 aa3.94□□□□□ -1.78
ARFGEF1-203ENST00000518230 PRO2289Q9P1D8 64 aa3.94□□□□□ -1.78
ARFGEF1-203ENST00000518230 KRTAP10-10P60014 251 aa3.91□□□□□ -1.78
ARFGEF1-203ENST00000518230 KRTAP8-1Q8IUC2 63 aa3.87□□□□□ -1.79
ARFGEF1-203ENST00000518230 INE1O15225 51 aa3.84□□□□□ -1.79
ARFGEF1-203ENST00000518230 KRTAP12-3P60328 96 aa3.81□□□□□ -1.8
ARFGEF1-203ENST00000518230 KRTAP19-8Q3LI54 63 aa3.81□□□□□ -1.8
ARFGEF1-203ENST00000518230 KRTAP10-5P60370 271 aa3.8□□□□□ -1.8
ARFGEF1-203ENST00000518230 MT1XP80297 61 aa3.78□□□□□ -1.8
ARFGEF1-203ENST00000518230 KRTAP9-3Q9BYQ3 159 aa3.78□□□□□ -1.8
ARFGEF1-203ENST00000518230 MT1BP07438 61 aa3.78□□□□□ -1.8
ARFGEF1-203ENST00000518230 KRTAP10-12P60413 245 aa3.77□□□□□ -1.81
ARFGEF1-203ENST00000518230 KRTAP10-7P60409 375 aaPredicted RBP3.74□□□□□ -1.81
ARFGEF1-203ENST00000518230 KMT2DO14686 5537 aa3.65□□□□□ -1.82
ARFGEF1-203ENST00000518230 USH2AO75445 5202 aa3.65□□□□□ -1.82
ARFGEF1-203ENST00000518230 KRTAP19-5Q3LI72 72 aa3.61□□□□□ -1.83
ARFGEF1-203ENST00000518230 LCE3CQ5T5A8 94 aa3.6□□□□□ -1.83
ARFGEF1-203ENST00000518230 KRTAP9-6A8MVA2 160 aa3.55□□□□□ -1.84
ARFGEF1-203ENST00000518230 KRTAP4-8A0A0G2JLE6 195 aa3.51□□□□□ -1.85
ARFGEF1-203ENST00000518230 KRTAP4-8Q9BYQ9 185 aa3.51□□□□□ -1.85
ARFGEF1-203ENST00000518230 KRTAP4-7Q9BYR0 210 aa3.48□□□□□ -1.85
ARFGEF1-203ENST00000518230 KRTAP2-3P0C7H8 128 aa3.42□□□□□ -1.86
ARFGEF1-203ENST00000518230 KRTAP2-4Q9BYR9 128 aa3.42□□□□□ -1.86
ARFGEF1-203ENST00000518230 KRTAP2-1Q9BYU5 128 aa3.42□□□□□ -1.86
ARFGEF1-203ENST00000518230 SSPOA2VEC9 5147 aa3.41□□□□□ -1.86
ARFGEF1-203ENST00000518230 FSIP2Q5CZC0 6907 aa3.4□□□□□ -1.86
ARFGEF1-203ENST00000518230 KRTAP19-7Q3SYF9 63 aa3.37□□□□□ -1.87
ARFGEF1-203ENST00000518230 KRTAP9-6A0A140TA67 174 aa3.32□□□□□ -1.88
ARFGEF1-203ENST00000518230 KRTAP9-2Q9BYQ4 174 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms