RNA–Protein interactions for RNA: ENST00000518110.1

SREK1-204, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 763 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-204ENST00000518110 KRTAP12-1P59990 96 aa2.03□□□□□ -2.08
SREK1-204ENST00000518110 APLNQ9ULZ1 77 aa2.03□□□□□ -2.08
SREK1-204ENST00000518110 ANK3Q12955 4377 aaKnown RBP2.03□□□□□ -2.09
SREK1-204ENST00000518110 INE1O15225 51 aa2.02□□□□□ -2.09
SREK1-204ENST00000518110 BAHCC1Q9P281 2608 aa2.01□□□□□ -2.09
SREK1-204ENST00000518110 HECTD1Q9ULT8 2610 aa2.01□□□□□ -2.09
SREK1-204ENST00000518110 ACACBO00763 2458 aa2.01□□□□□ -2.09
SREK1-204ENST00000518110 CCDC168Q8NDH2 2452 aa2.01□□□□□ -2.09
SREK1-204ENST00000518110 MEGF8Q7Z7M0 2845 aa2□□□□□ -2.09
SREK1-204ENST00000518110 SETD2Q9BYW2 2564 aaPredicted RBP2□□□□□ -2.09
SREK1-204ENST00000518110 UBE2DNLQ8IWF7 75 aa2□□□□□ -2.09
SREK1-204ENST00000518110 VWFP04275 2813 aa2□□□□□ -2.09
SREK1-204ENST00000518110 ACANP16112 2415 aa2□□□□□ -2.09
SREK1-204ENST00000518110 ABCA12Q86UK0 2595 aa2□□□□□ -2.09
SREK1-204ENST00000518110 A0A0D9SG42 100 aa1.99□□□□□ -2.09
SREK1-204ENST00000518110 ITPR3Q14573 2671 aa1.98□□□□□ -2.09
SREK1-204ENST00000518110 ZFHX2Q9C0A1 2572 aaPredicted RBP1.98□□□□□ -2.09
SREK1-204ENST00000518110 MUC3AQ02505 3323 aa1.97□□□□□ -2.09
SREK1-204ENST00000518110 VPS13CQ709C8 3753 aa1.97□□□□□ -2.09
SREK1-204ENST00000518110 CSMD2Q7Z408 3487 aa1.96□□□□□ -2.1
SREK1-204ENST00000518110 POLQO75417 2590 aa1.96□□□□□ -2.1
SREK1-204ENST00000518110 FASNP49327 2511 aaKnown RBP1.96□□□□□ -2.1
SREK1-204ENST00000518110 NBEAL1Q6ZS30 2694 aa1.96□□□□□ -2.1
SREK1-204ENST00000518110 TGP01266 2768 aa1.95□□□□□ -2.1
SREK1-204ENST00000518110 PDZD2O15018 2839 aa1.95□□□□□ -2.1
SREK1-204ENST00000518110 PKD1L1Q8TDX9 2849 aa1.95□□□□□ -2.1
SREK1-204ENST00000518110 FLNCQ14315 2725 aa1.93□□□□□ -2.1
SREK1-204ENST00000518110 VPS13DQ5THJ4 4388 aa1.93□□□□□ -2.1
SREK1-204ENST00000518110 DNAH8Q96JB1 4490 aa1.93□□□□□ -2.1
SREK1-204ENST00000518110 TENM3Q9P273 2699 aa1.93□□□□□ -2.1
SREK1-204ENST00000518110 COL6A5A8TX70 2615 aa1.93□□□□□ -2.1
SREK1-204ENST00000518110 FLNAP21333 2647 aaKnown RBP1.93□□□□□ -2.1
SREK1-204ENST00000518110 MYO18BQ8IUG5 2567 aa1.93□□□□□ -2.1
SREK1-204ENST00000518110 SMR3AQ99954 134 aa1.92□□□□□ -2.1
SREK1-204ENST00000518110 TEP1Q99973 2627 aaKnown RBP1.92□□□□□ -2.1
SREK1-204ENST00000518110 ITPR2Q14571 2701 aa1.92□□□□□ -2.1
SREK1-204ENST00000518110 R4GN34 69 aa1.91□□□□□ -2.1
SREK1-204ENST00000518110 FAM208BQ5VWN6 2430 aa1.89□□□□□ -2.11
SREK1-204ENST00000518110 STAB2Q8WWQ8 2551 aa1.89□□□□□ -2.11
SREK1-204ENST00000518110 ATRQ13535 2644 aa1.88□□□□□ -2.11
SREK1-204ENST00000518110 MAST4O15021 2626 aa1.88□□□□□ -2.11
SREK1-204ENST00000518110 NOTCH1P46531 2555 aa1.88□□□□□ -2.11
SREK1-204ENST00000518110 CACNA1AO00555 2505 aa1.87□□□□□ -2.11
SREK1-204ENST00000518110 TRRAPQ9Y4A5 3859 aa1.87□□□□□ -2.11
SREK1-204ENST00000518110 Q5VSD8 79 aa1.87□□□□□ -2.11
SREK1-204ENST00000518110 DMBT1Q9UGM3 2413 aaPredicted RBP1.87□□□□□ -2.11
SREK1-204ENST00000518110 DNAH10Q8IVF4 4471 aa1.87□□□□□ -2.11
SREK1-204ENST00000518110 COL7A1Q02388 2944 aa1.87□□□□□ -2.11
SREK1-204ENST00000518110 DNAH17Q9UFH2 4485 aa1.86□□□□□ -2.11
SREK1-204ENST00000518110 DYNC2H1Q8NCM8 4307 aaKnown RBP1.86□□□□□ -2.11
SREK1-204ENST00000518110 FLNBO75369 2602 aaKnown RBP1.86□□□□□ -2.11
SREK1-204ENST00000518110 IGSF10Q6WRI0 2623 aa1.86□□□□□ -2.11
SREK1-204ENST00000518110 TENM1Q9UKZ4 2725 aa1.85□□□□□ -2.11
SREK1-204ENST00000518110 DNAH3Q8TD57 4116 aa1.85□□□□□ -2.11
SREK1-204ENST00000518110 FRAS1Q86XX4 4008 aa1.85□□□□□ -2.11
SREK1-204ENST00000518110 CSMD3Q7Z407 3707 aa1.85□□□□□ -2.11
SREK1-204ENST00000518110 ANK2Q01484 3957 aa1.85□□□□□ -2.11
SREK1-204ENST00000518110 CUBNO60494 3623 aa1.84□□□□□ -2.11
SREK1-204ENST00000518110 FBN3Q75N90 2809 aa1.84□□□□□ -2.11
SREK1-204ENST00000518110 C9orf92A6NGG3 77 aa1.84□□□□□ -2.11
SREK1-204ENST00000518110 LYSTQ99698 3801 aa1.83□□□□□ -2.12
SREK1-204ENST00000518110 USP24Q9UPU5 2620 aa1.83□□□□□ -2.12
SREK1-204ENST00000518110 DNAH9Q9NYC9 4486 aa1.82□□□□□ -2.12
SREK1-204ENST00000518110 CRCT1Q9UGL9 99 aa1.82□□□□□ -2.12
SREK1-204ENST00000518110 DNAH2Q9P225 4427 aa1.82□□□□□ -2.12
SREK1-204ENST00000518110 PRKDCP78527 4128 aaKnown RBP1.81□□□□□ -2.12
SREK1-204ENST00000518110 DNAH6Q9C0G6 4158 aa1.81□□□□□ -2.12
SREK1-204ENST00000518110 NSD1Q96L73 2696 aaPredicted RBP1.81□□□□□ -2.12
SREK1-204ENST00000518110 HUWE1Q7Z6Z7 4374 aaKnown RBP1.8□□□□□ -2.12
SREK1-204ENST00000518110 MGAM2Q2M2H8 2515 aa1.79□□□□□ -2.12
SREK1-204ENST00000518110 STAB1Q9NY15 2570 aa1.79□□□□□ -2.12
SREK1-204ENST00000518110 ZNF469Q96JG9 3925 aaPredicted RBP1.78□□□□□ -2.12
SREK1-204ENST00000518110 TNP1P09430 55 aa1.78□□□□□ -2.12
SREK1-204ENST00000518110 DNAH11Q96DT5 4516 aa1.77□□□□□ -2.13
SREK1-204ENST00000518110 CMYA5Q8N3K9 4069 aa1.77□□□□□ -2.13
SREK1-204ENST00000518110 DNAH7Q8WXX0 4024 aa1.76□□□□□ -2.13
SREK1-204ENST00000518110 SACSQ9NZJ4 4579 aa1.75□□□□□ -2.13
SREK1-204ENST00000518110 HECTD4Q9Y4D8 3996 aa1.74□□□□□ -2.13
SREK1-204ENST00000518110 J3QKU1 62 aa1.74□□□□□ -2.13
SREK1-204ENST00000518110 KRTAP4-1Q9BYQ7 146 aa1.74□□□□□ -2.13
SREK1-204ENST00000518110 KRTAP10-4P60372 401 aaPredicted RBP1.71□□□□□ -2.14
SREK1-204ENST00000518110 MYCBP2O75592 4640 aa1.71□□□□□ -2.14
SREK1-204ENST00000518110 LRP1BQ9NZR2 4599 aa1.7□□□□□ -2.14
SREK1-204ENST00000518110 PKHD1L1Q86WI1 4243 aa1.7□□□□□ -2.14
SREK1-204ENST00000518110 KMT2AQ03164 3969 aa1.69□□□□□ -2.14
SREK1-204ENST00000518110 LRP1Q07954 4544 aaKnown RBP1.67□□□□□ -2.14
SREK1-204ENST00000518110 STARD9Q9P2P6 4700 aa1.66□□□□□ -2.14
SREK1-204ENST00000518110 PLECQ15149 4684 aaKnown RBP1.66□□□□□ -2.14
SREK1-204ENST00000518110 KRTAP8-1Q8IUC2 63 aa1.65□□□□□ -2.15
SREK1-204ENST00000518110 APOBP04114 4563 aaKnown RBP1.64□□□□□ -2.15
SREK1-204ENST00000518110 PKHD1P08F94 4074 aa1.63□□□□□ -2.15
SREK1-204ENST00000518110 DNAH5Q8TE73 4624 aa1.63□□□□□ -2.15
SREK1-204ENST00000518110 VPS13BQ7Z7G8 4022 aa1.63□□□□□ -2.15
SREK1-204ENST00000518110 PKD1P98161 4303 aa1.62□□□□□ -2.15
SREK1-204ENST00000518110 FAT2Q9NYQ8 4349 aa1.62□□□□□ -2.15
SREK1-204ENST00000518110 TNXBP22105 4242 aa1.61□□□□□ -2.15
SREK1-204ENST00000518110 DYNC1H1Q14204 4646 aaKnown RBP1.6□□□□□ -2.15
SREK1-204ENST00000518110 FCGBPQ9Y6R7 5405 aaPredicted RBP1.6□□□□□ -2.15
SREK1-204ENST00000518110 FAT3Q8TDW7 4589 aa1.57□□□□□ -2.16
SREK1-204ENST00000518110 HSPG2P98160 4391 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms