RNA–Protein interactions for RNA: ENST00000518026.5

MSR1-207, Transcript of macrophage scavenger receptor 1, humanhuman

TSL 4

Gene MSR1, Length 530 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-207ENST00000518026 DMXL2Q8TDJ6 3036 aa0.68□□□□□ -2.3
MSR1-207ENST00000518026 ATMQ13315 3056 aa0.68□□□□□ -2.3
MSR1-207ENST00000518026 AHNAK2Q8IVF2 5795 aa0.68□□□□□ -2.3
MSR1-207ENST00000518026 MXRA5Q9NR99 2828 aa0.67□□□□□ -2.3
MSR1-207ENST00000518026 PRUNE2Q8WUY3 3088 aa0.67□□□□□ -2.3
MSR1-207ENST00000518026 MT1AP04731 61 aa0.67□□□□□ -2.3
MSR1-207ENST00000518026 ZNF469Q96JG9 3925 aaPredicted RBP0.67□□□□□ -2.3
MSR1-207ENST00000518026 TEP1Q99973 2627 aaKnown RBP0.67□□□□□ -2.3
MSR1-207ENST00000518026 C5orf42Q9H799 3197 aa0.66□□□□□ -2.3
MSR1-207ENST00000518026 SMR3BP02814 79 aaPredicted RBP0.66□□□□□ -2.3
MSR1-207ENST00000518026 MAP1AP78559 2803 aaPredicted RBP0.66□□□□□ -2.3
MSR1-207ENST00000518026 SPG11Q96JI7 2443 aa0.66□□□□□ -2.3
MSR1-207ENST00000518026 LAMA3Q16787 3333 aa0.66□□□□□ -2.3
MSR1-207ENST00000518026 BOD1L1Q8NFC6 3051 aa0.66□□□□□ -2.3
MSR1-207ENST00000518026 USP9XQ93008 2570 aaPredicted RBP0.65□□□□□ -2.3
MSR1-207ENST00000518026 AKAP9Q99996 3911 aa0.65□□□□□ -2.3
MSR1-207ENST00000518026 FRAS1Q86XX4 4008 aa0.65□□□□□ -2.3
MSR1-207ENST00000518026 ZFYVE26Q68DK2 2539 aa0.65□□□□□ -2.31
MSR1-207ENST00000518026 ANKHD1Q8IWZ3 2542 aaKnown RBP0.65□□□□□ -2.31
MSR1-207ENST00000518026 DNAH12Q6ZR08 3092 aa0.65□□□□□ -2.31
MSR1-207ENST00000518026 KRTAP21-1Q3LI58 79 aa0.65□□□□□ -2.31
MSR1-207ENST00000518026 LAMA5O15230 3695 aa0.65□□□□□ -2.31
MSR1-207ENST00000518026 FAT2Q9NYQ8 4349 aa0.65□□□□□ -2.31
MSR1-207ENST00000518026 CUBNO60494 3623 aa0.64□□□□□ -2.31
MSR1-207ENST00000518026 SPRR2AP35326 72 aa0.64□□□□□ -2.31
MSR1-207ENST00000518026 KRTAP19-5Q3LI72 72 aa0.64□□□□□ -2.31
MSR1-207ENST00000518026 CEP350Q5VT06 3117 aa0.64□□□□□ -2.31
MSR1-207ENST00000518026 SONP18583 2426 aaKnown RBP0.64□□□□□ -2.31
MSR1-207ENST00000518026 CSMD1Q96PZ7 3565 aa0.63□□□□□ -2.31
MSR1-207ENST00000518026 TLN2Q9Y4G6 2542 aa0.63□□□□□ -2.31
MSR1-207ENST00000518026 TRIOO75962 3097 aa0.63□□□□□ -2.31
MSR1-207ENST00000518026 KRTAP5-10Q6L8G5 202 aa0.63□□□□□ -2.31
MSR1-207ENST00000518026 DNAH8Q96JB1 4490 aa0.63□□□□□ -2.31
MSR1-207ENST00000518026 HRNRQ86YZ3 2850 aaPredicted RBP0.63□□□□□ -2.31
MSR1-207ENST00000518026 TENM3Q9P273 2699 aa0.62□□□□□ -2.31
MSR1-207ENST00000518026 DYNC2H1Q8NCM8 4307 aaKnown RBP0.62□□□□□ -2.31
MSR1-207ENST00000518026 KRTAP6-2Q3LI66 62 aa0.61□□□□□ -2.31
MSR1-207ENST00000518026 HTTP42858 3142 aa0.61□□□□□ -2.31
MSR1-207ENST00000518026 TEX15Q9BXT5 2789 aa0.61□□□□□ -2.31
MSR1-207ENST00000518026 CFAP46Q8IYW2 2715 aa0.6□□□□□ -2.31
MSR1-207ENST00000518026 PKHD1L1Q86WI1 4243 aa0.6□□□□□ -2.31
MSR1-207ENST00000518026 DNAH3Q8TD57 4116 aa0.6□□□□□ -2.31
MSR1-207ENST00000518026 TGP01266 2768 aa0.6□□□□□ -2.31
MSR1-207ENST00000518026 MKI67P46013 3256 aaKnown RBP0.6□□□□□ -2.31
MSR1-207ENST00000518026 DCHS1Q96JQ0 3298 aa0.59□□□□□ -2.31
MSR1-207ENST00000518026 FLGP20930 4061 aaPredicted RBP0.59□□□□□ -2.31
MSR1-207ENST00000518026 SPRR2FQ96RM1 72 aa0.59□□□□□ -2.31
MSR1-207ENST00000518026 MYO18BQ8IUG5 2567 aa0.59□□□□□ -2.32
MSR1-207ENST00000518026 FLNAP21333 2647 aaKnown RBP0.59□□□□□ -2.32
MSR1-207ENST00000518026 LAMA1P25391 3075 aa0.58□□□□□ -2.32
MSR1-207ENST00000518026 SMG1Q96Q15 3661 aaKnown RBP0.58□□□□□ -2.32
MSR1-207ENST00000518026 ITPR2Q14571 2701 aa0.58□□□□□ -2.32
MSR1-207ENST00000518026 SZT2Q5T011 3432 aa0.58□□□□□ -2.32
MSR1-207ENST00000518026 ANK3Q12955 4377 aaKnown RBP0.57□□□□□ -2.32
MSR1-207ENST00000518026 DNAH2Q9P225 4427 aa0.57□□□□□ -2.32
MSR1-207ENST00000518026 ADGRG4Q8IZF6 3080 aa0.57□□□□□ -2.32
MSR1-207ENST00000518026 SYNE1Q8NF91 8797 aaKnown RBP0.57□□□□□ -2.32
MSR1-207ENST00000518026 WDFY4Q6ZS81 3184 aa0.57□□□□□ -2.32
MSR1-207ENST00000518026 SPRR2EP22531 72 aa0.57□□□□□ -2.32
MSR1-207ENST00000518026 PKD1P98161 4303 aa0.57□□□□□ -2.32
MSR1-207ENST00000518026 HSPG2P98160 4391 aa0.57□□□□□ -2.32
MSR1-207ENST00000518026 HECTD4Q9Y4D8 3996 aa0.57□□□□□ -2.32
MSR1-207ENST00000518026 FREM2Q5SZK8 3169 aa0.57□□□□□ -2.32
MSR1-207ENST00000518026 HUWE1Q7Z6Z7 4374 aaKnown RBP0.57□□□□□ -2.32
MSR1-207ENST00000518026 MUC16Q8WXI7 14507 aa0.56□□□□□ -2.32
MSR1-207ENST00000518026 SPTBN5Q9NRC6 3674 aaKnown RBP0.56□□□□□ -2.32
MSR1-207ENST00000518026 MUC3AQ02505 3323 aa0.56□□□□□ -2.32
MSR1-207ENST00000518026 XIRP2A4UGR9 3374 aa0.56□□□□□ -2.32
MSR1-207ENST00000518026 FASNP49327 2511 aaKnown RBP0.55□□□□□ -2.32
MSR1-207ENST00000518026 LRP1Q07954 4544 aaKnown RBP0.55□□□□□ -2.32
MSR1-207ENST00000518026 SVEP1Q4LDE5 3571 aa0.55□□□□□ -2.32
MSR1-207ENST00000518026 DNAH7Q8WXX0 4024 aa0.55□□□□□ -2.32
MSR1-207ENST00000518026 CSMD2Q7Z408 3487 aa0.54□□□□□ -2.32
MSR1-207ENST00000518026 NBEAL1Q6ZS30 2694 aa0.54□□□□□ -2.32
MSR1-207ENST00000518026 MT1EP04732 61 aa0.53□□□□□ -2.32
MSR1-207ENST00000518026 CENPEQ02224 2701 aa0.53□□□□□ -2.32
MSR1-207ENST00000518026 CFAP47Q6ZTR5 3102 aa0.52□□□□□ -2.33
MSR1-207ENST00000518026 SRCAPQ6ZRS2 3230 aa0.52□□□□□ -2.33
MSR1-207ENST00000518026 MGAM2Q2M2H8 2515 aa0.52□□□□□ -2.33
MSR1-207ENST00000518026 SPRR2GQ9BYE4 73 aa0.52□□□□□ -2.33
MSR1-207ENST00000518026 DNAH6Q9C0G6 4158 aa0.52□□□□□ -2.33
MSR1-207ENST00000518026 CEP295Q9C0D2 2601 aa0.51□□□□□ -2.33
MSR1-207ENST00000518026 CMYA5Q8N3K9 4069 aa0.51□□□□□ -2.33
MSR1-207ENST00000518026 DNAH10Q8IVF4 4471 aa0.51□□□□□ -2.33
MSR1-207ENST00000518026 MT1LQ93083 61 aa0.51□□□□□ -2.33
MSR1-207ENST00000518026 LOC400499M0QZD8 3231 aa0.5□□□□□ -2.33
MSR1-207ENST00000518026 DOPEY1Q5JWR5 2465 aa0.5□□□□□ -2.33
MSR1-207ENST00000518026 FAT3Q8TDW7 4589 aa0.5□□□□□ -2.33
MSR1-207ENST00000518026 LAMA2P24043 3122 aaKnown RBP0.5□□□□□ -2.33
MSR1-207ENST00000518026 DMDP11532 3685 aa0.49□□□□□ -2.33
MSR1-207ENST00000518026 DNAH1Q9P2D7 4330 aa0.49□□□□□ -2.33
MSR1-207ENST00000518026 MT1HP80294 61 aa0.49□□□□□ -2.33
MSR1-207ENST00000518026 GOLGB1Q14789 3259 aaKnown RBP0.48□□□□□ -2.33
MSR1-207ENST00000518026 VPS13AQ96RL7 3174 aa0.48□□□□□ -2.33
MSR1-207ENST00000518026 SPTAN1Q13813 2472 aaKnown RBP0.48□□□□□ -2.33
MSR1-207ENST00000518026 IGSF10Q6WRI0 2623 aa0.48□□□□□ -2.33
MSR1-207ENST00000518026 SPEGQ15772 3267 aa0.47□□□□□ -2.33
MSR1-207ENST00000518026 APOBP04114 4563 aaKnown RBP0.47□□□□□ -2.33
MSR1-207ENST00000518026 LPAP08519 4548 aa0.47□□□□□ -2.33
MSR1-207ENST00000518026 MAST4O15021 2626 aa0.47□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms