RNA–Protein interactions for RNA: ENST00000517391.5

CPNE3-202, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 785 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-202ENST00000517391 KRTAP5-7Q6L8G8 165 aa2.48□□□□□ -2.01
CPNE3-202ENST00000517391 SPAG11AQ6PDA7 123 aa2.48□□□□□ -2.01
CPNE3-202ENST00000517391 DSCR8Q96T75 97 aa2.48□□□□□ -2.01
CPNE3-202ENST00000517391 H7BZZ5 65 aa2.47□□□□□ -2.01
CPNE3-202ENST00000517391 CCKP06307 115 aa2.47□□□□□ -2.01
CPNE3-202ENST00000517391 SPRR1AP35321 89 aa2.47□□□□□ -2.01
CPNE3-202ENST00000517391 BRK1Q8WUW1 75 aa2.47□□□□□ -2.01
CPNE3-202ENST00000517391 CYSTM1Q9H1C7 97 aa2.47□□□□□ -2.01
CPNE3-202ENST00000517391 KCNQ1DNQ9H478 68 aa2.47□□□□□ -2.01
CPNE3-202ENST00000517391 ETDCA0A1B0GVM5 59 aa2.46□□□□□ -2.02
CPNE3-202ENST00000517391 PDE6GP18545 87 aa2.46□□□□□ -2.02
CPNE3-202ENST00000517391 SPRR4Q96PI1 79 aa2.46□□□□□ -2.02
CPNE3-202ENST00000517391 LINC00846Q9NV44 126 aa2.46□□□□□ -2.02
CPNE3-202ENST00000517391 TPRXLQ17RH7 258 aa2.45□□□□□ -2.02
CPNE3-202ENST00000517391 FP248Q71RG6 208 aaPredicted RBP2.45□□□□□ -2.02
CPNE3-202ENST00000517391 Q8NDZ9 215 aa2.45□□□□□ -2.02
CPNE3-202ENST00000517391 ZCCHC13Q8WW36 166 aaKnown RBP2.45□□□□□ -2.02
CPNE3-202ENST00000517391 LOC110117498A0A087WWA1 95 aa2.44□□□□□ -2.02
CPNE3-202ENST00000517391 TMEM256-PLSCR3K7ERE1 68 aa2.44□□□□□ -2.02
CPNE3-202ENST00000517391 NCR3O14931 201 aa2.44□□□□□ -2.02
CPNE3-202ENST00000517391 SPINK1P00995 79 aa2.44□□□□□ -2.02
CPNE3-202ENST00000517391 RPS29P62273 56 aaKnown RBP2.44□□□□□ -2.02
CPNE3-202ENST00000517391 Q1T7F1 81 aa2.44□□□□□ -2.02
CPNE3-202ENST00000517391 Q6ZRX8 168 aa2.44□□□□□ -2.02
CPNE3-202ENST00000517391 UBL5Q9BZL1 73 aa2.44□□□□□ -2.02
CPNE3-202ENST00000517391 ORMDL1Q9P0S3 153 aa2.44□□□□□ -2.02
CPNE3-202ENST00000517391 IGKV3D-7A0A0C4DH55 119 aa2.43□□□□□ -2.02
CPNE3-202ENST00000517391 SOSTDC1Q6X4U4 206 aa2.43□□□□□ -2.02
CPNE3-202ENST00000517391 SSBP3-AS1Q7Z2R9 100 aa2.43□□□□□ -2.02
CPNE3-202ENST00000517391 KTN1-AS1Q86SY8 53 aa2.43□□□□□ -2.02
CPNE3-202ENST00000517391 C20orf197Q8N268 126 aa2.43□□□□□ -2.02
CPNE3-202ENST00000517391 Q9BRP9 147 aa2.43□□□□□ -2.02
CPNE3-202ENST00000517391 C14orf132Q9NPU4 83 aa2.43□□□□□ -2.02
CPNE3-202ENST00000517391 TRAV23DV6A0A075B6W5 121 aa2.42□□□□□ -2.02
CPNE3-202ENST00000517391 A0A087WVE0 104 aa2.42□□□□□ -2.02
CPNE3-202ENST00000517391 RNF213Q63HN8 5207 aa2.41□□□□□ -2.02
CPNE3-202ENST00000517391 TRBV7-4A0A0J9YYF1 115 aa2.41□□□□□ -2.02
CPNE3-202ENST00000517391 RBM3P98179 157 aaKnown RBP2.41□□□□□ -2.02
CPNE3-202ENST00000517391 ASB16-AS1Q495Z4 193 aa2.41□□□□□ -2.02
CPNE3-202ENST00000517391 ATP11AUNQ6ZP68 121 aa2.41□□□□□ -2.02
CPNE3-202ENST00000517391 SMIM11BQ8TCY0 68 aa2.41□□□□□ -2.02
CPNE3-202ENST00000517391 RETNLBQ9BQ08 111 aa2.41□□□□□ -2.02
CPNE3-202ENST00000517391 A8MUN3 132 aa2.4□□□□□ -2.03
CPNE3-202ENST00000517391 CYP4F30PQ9H0H9 118 aa2.4□□□□□ -2.03
CPNE3-202ENST00000517391 LPAP08519 4548 aa2.4□□□□□ -2.03
CPNE3-202ENST00000517391 F8WEM9 126 aa2.39□□□□□ -2.03
CPNE3-202ENST00000517391 SPRR1BP22528 89 aa2.39□□□□□ -2.03
CPNE3-202ENST00000517391 Q6ZQT0 140 aa2.39□□□□□ -2.03
CPNE3-202ENST00000517391 LIMD2Q9BT23 127 aa2.39□□□□□ -2.03
CPNE3-202ENST00000517391 ELOF1P60002 83 aaKnown RBP2.38□□□□□ -2.03
CPNE3-202ENST00000517391 TMEM254Q8TBM7 123 aa2.38□□□□□ -2.03
CPNE3-202ENST00000517391 COX7BP24311 80 aa2.37□□□□□ -2.03
CPNE3-202ENST00000517391 NREPQ16612 68 aa2.37□□□□□ -2.03
CPNE3-202ENST00000517391 LCA10Q71F78 164 aa2.37□□□□□ -2.03
CPNE3-202ENST00000517391 NDUFB1O75438 58 aa2.36□□□□□ -2.03
CPNE3-202ENST00000517391 LINC00575Q6W349 94 aa2.36□□□□□ -2.03
CPNE3-202ENST00000517391 PRO2289Q9P1D8 64 aa2.36□□□□□ -2.03
CPNE3-202ENST00000517391 IGLV5-48A0A075B6I7 105 aa2.35□□□□□ -2.03
CPNE3-202ENST00000517391 hDV103S1A0JD37 113 aa2.35□□□□□ -2.03
CPNE3-202ENST00000517391 KRTAP6-3Q3LI67 103 aa2.35□□□□□ -2.03
CPNE3-202ENST00000517391 C7orf65Q6ZTY9 151 aa2.35□□□□□ -2.03
CPNE3-202ENST00000517391 SNURFQ9Y675 71 aa2.35□□□□□ -2.03
CPNE3-202ENST00000517391 MUC2Q02817 5179 aa2.35□□□□□ -2.03
CPNE3-202ENST00000517391 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.34□□□□□ -2.03
CPNE3-202ENST00000517391 DEFB105AQ8NG35 78 aa2.33□□□□□ -2.04
CPNE3-202ENST00000517391 A0A0G2JQZ4 141 aa2.31□□□□□ -2.04
CPNE3-202ENST00000517391 CDC42SE1Q9NRR8 79 aa2.31□□□□□ -2.04
CPNE3-202ENST00000517391 TRAV22A0A0B4J277 110 aa2.3□□□□□ -2.04
CPNE3-202ENST00000517391 LOC101927531A0A1B0GV80 90 aa2.3□□□□□ -2.04
CPNE3-202ENST00000517391 A6NN06 94 aa2.3□□□□□ -2.04
CPNE3-202ENST00000517391 LINC01554Q52M75 96 aa2.29□□□□□ -2.04
CPNE3-202ENST00000517391 Q6ZQY7 126 aa2.29□□□□□ -2.04
CPNE3-202ENST00000517391 FAT4Q6V0I7 4981 aa2.29□□□□□ -2.04
CPNE3-202ENST00000517391 C9orf92A6NGG3 77 aa2.28□□□□□ -2.04
CPNE3-202ENST00000517391 RPL37P61927 97 aaKnown RBP2.28□□□□□ -2.04
CPNE3-202ENST00000517391 PCOTHQ58A44 107 aa2.28□□□□□ -2.04
CPNE3-202ENST00000517391 MUC17Q685J3 4493 aa2.27□□□□□ -2.05
CPNE3-202ENST00000517391 HCG22E2RYF7 251 aa2.27□□□□□ -2.05
CPNE3-202ENST00000517391 Q5VV11 94 aa2.27□□□□□ -2.05
CPNE3-202ENST00000517391 KRTAP4-1Q9BYQ7 146 aa2.27□□□□□ -2.05
CPNE3-202ENST00000517391 CHKB-CPT1BH3BT56 60 aa2.25□□□□□ -2.05
CPNE3-202ENST00000517391 CASC2Q6XLA1 102 aa2.25□□□□□ -2.05
CPNE3-202ENST00000517391 KRTAP12-3P60328 96 aa2.24□□□□□ -2.05
CPNE3-202ENST00000517391 KRTAP19-2Q3LHN2 52 aa2.24□□□□□ -2.05
CPNE3-202ENST00000517391 KRTAP21-2Q3LI59 83 aa2.24□□□□□ -2.05
CPNE3-202ENST00000517391 COX6B2Q6YFQ2 88 aa2.24□□□□□ -2.05
CPNE3-202ENST00000517391 LINC00208Q96KT6 92 aa2.24□□□□□ -2.05
CPNE3-202ENST00000517391 MT1HP80294 61 aa2.23□□□□□ -2.05
CPNE3-202ENST00000517391 LINC01558Q9Y6Z2 57 aa2.23□□□□□ -2.05
CPNE3-202ENST00000517391 M0R2T5 61 aa2.22□□□□□ -2.05
CPNE3-202ENST00000517391 SPTSSBQ8NFR3 76 aa2.22□□□□□ -2.05
CPNE3-202ENST00000517391 A0A087WSZ3 146 aa2.21□□□□□ -2.06
CPNE3-202ENST00000517391 Q96NJ1 140 aa2.21□□□□□ -2.06
CPNE3-202ENST00000517391 PRR15LQ9BU68 103 aa2.21□□□□□ -2.06
CPNE3-202ENST00000517391 K7EQZ3 153 aa2.19□□□□□ -2.06
CPNE3-202ENST00000517391 TP53AIP1Q9HCN2 124 aa2.19□□□□□ -2.06
CPNE3-202ENST00000517391 COA5Q86WW8 74 aa2.18□□□□□ -2.06
CPNE3-202ENST00000517391 CRCT1Q9UGL9 99 aa2.18□□□□□ -2.06
CPNE3-202ENST00000517391 H0Y9P7 68 aa2.17□□□□□ -2.06
CPNE3-202ENST00000517391 KRTAP13-4Q3LI77 160 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms