RNA–Protein interactions for RNA: ENST00000517325.5

CHMP7-203, Transcript of charged multivesicular body protein 7, humanhuman

TSL 2

Gene CHMP7, Length 2,639 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-203ENST00000517325 FAT3Q8TDW7 4589 aa8.96□□□□□ -0.98
CHMP7-203ENST00000517325 KRTAP17-1Q9BYP8 105 aa8.93□□□□□ -0.98
CHMP7-203ENST00000517325 RYR1P21817 5038 aa8.91□□□□□ -0.98
CHMP7-203ENST00000517325 H0YAA0 97 aa8.88□□□□□ -0.99
CHMP7-203ENST00000517325 KRTAP3-1Q9BYR8 98 aa8.87□□□□□ -0.99
CHMP7-203ENST00000517325 KIAA1109Q2LD37 5005 aa8.82□□□□□ -1
CHMP7-203ENST00000517325 DMBT1Q9UGM3 2413 aaPredicted RBP8.81□□□□□ -1
CHMP7-203ENST00000517325 MYCBP2O75592 4640 aa8.78□□□□□ -1
CHMP7-203ENST00000517325 CRIPTQ9P021 101 aa8.77□□□□□ -1.01
CHMP7-203ENST00000517325 MT1HL1P0DM35 61 aa8.75□□□□□ -1.01
CHMP7-203ENST00000517325 RPL37P61927 97 aaKnown RBP8.73□□□□□ -1.01
CHMP7-203ENST00000517325 KRTAP25-1Q3LHN0 102 aa8.73□□□□□ -1.01
CHMP7-203ENST00000517325 XP32Q5T750 250 aa8.73□□□□□ -1.01
CHMP7-203ENST00000517325 COX6B2Q6YFQ2 88 aa8.73□□□□□ -1.01
CHMP7-203ENST00000517325 A0A1B0GU33 70 aa8.72□□□□□ -1.01
CHMP7-203ENST00000517325 EPPK1P58107 5090 aaKnown RBP8.68□□□□□ -1.02
CHMP7-203ENST00000517325 H1FX-AS1Q4G0G2 97 aa8.65□□□□□ -1.02
CHMP7-203ENST00000517325 ROMO1P60602 79 aa8.64□□□□□ -1.03
CHMP7-203ENST00000517325 KRTAP4-5Q9BYR2 181 aa8.51□□□□□ -1.05
CHMP7-203ENST00000517325 LPAP08519 4548 aa8.48□□□□□ -1.05
CHMP7-203ENST00000517325 P0C880 135 aa8.48□□□□□ -1.05
CHMP7-203ENST00000517325 TPRXLQ17RH7 258 aa8.47□□□□□ -1.05
CHMP7-203ENST00000517325 LRP2P98164 4655 aa8.47□□□□□ -1.05
CHMP7-203ENST00000517325 K7ERS5 55 aa8.45□□□□□ -1.06
CHMP7-203ENST00000517325 A0A0A0MQY5 61 aa8.44□□□□□ -1.06
CHMP7-203ENST00000517325 S4R3F8 94 aa8.44□□□□□ -1.06
CHMP7-203ENST00000517325 ABCA13Q86UQ4 5058 aa8.42□□□□□ -1.06
CHMP7-203ENST00000517325 A0A0D9SG42 100 aa8.4□□□□□ -1.07
CHMP7-203ENST00000517325 KRTAP13-4Q3LI77 160 aa8.38□□□□□ -1.07
CHMP7-203ENST00000517325 KRTAP10-6P60371 365 aaPredicted RBP8.37□□□□□ -1.07
CHMP7-203ENST00000517325 C10orf95Q9H7T3 257 aa8.33□□□□□ -1.08
CHMP7-203ENST00000517325 SPINT4Q6UDR6 99 aa8.28□□□□□ -1.08
CHMP7-203ENST00000517325 HERC2O95714 4834 aa8.19□□□□□ -1.1
CHMP7-203ENST00000517325 J3QL48 77 aa8.17□□□□□ -1.1
CHMP7-203ENST00000517325 SEC61BP60468 96 aaKnown RBP8.14□□□□□ -1.11
CHMP7-203ENST00000517325 KRTAP12-2P59991 146 aa8.12□□□□□ -1.11
CHMP7-203ENST00000517325 MUC17Q685J3 4493 aa8.11□□□□□ -1.11
CHMP7-203ENST00000517325 NDUFAF8A1L188 74 aa8.11□□□□□ -1.11
CHMP7-203ENST00000517325 KRTAP4-1Q9BYQ7 146 aa8.09□□□□□ -1.11
CHMP7-203ENST00000517325 KRTAP15-1Q3LI76 137 aa8.07□□□□□ -1.12
CHMP7-203ENST00000517325 BIRC6Q9NR09 4857 aa8.04□□□□□ -1.12
CHMP7-203ENST00000517325 KRTAP12-1P59990 96 aa7.98□□□□□ -1.13
CHMP7-203ENST00000517325 M0QZ58 72 aa7.94□□□□□ -1.14
CHMP7-203ENST00000517325 KRTAP19-2Q3LHN2 52 aa7.93□□□□□ -1.14
CHMP7-203ENST00000517325 MUC2Q02817 5179 aa7.83□□□□□ -1.16
CHMP7-203ENST00000517325 LORP23490 312 aaPredicted RBP7.81□□□□□ -1.16
CHMP7-203ENST00000517325 R4GN34 69 aa7.81□□□□□ -1.16
CHMP7-203ENST00000517325 HERC1Q15751 4861 aa7.81□□□□□ -1.16
CHMP7-203ENST00000517325 PCLOQ9Y6V0 5065 aa7.8□□□□□ -1.16
CHMP7-203ENST00000517325 LCE2BO14633 110 aa7.75□□□□□ -1.17
CHMP7-203ENST00000517325 HMCN2Q8NDA2 5059 aa7.74□□□□□ -1.17
CHMP7-203ENST00000517325 FLGP20930 4061 aaPredicted RBP7.68□□□□□ -1.18
CHMP7-203ENST00000517325 PLAC4Q8WY50 150 aa7.55□□□□□ -1.2
CHMP7-203ENST00000517325 LCE2CQ5TA81 110 aa7.52□□□□□ -1.21
CHMP7-203ENST00000517325 FAT4Q6V0I7 4981 aa7.48□□□□□ -1.21
CHMP7-203ENST00000517325 UBR4Q5T4S7 5183 aa7.38□□□□□ -1.23
CHMP7-203ENST00000517325 CAMK2N1Q7Z7J9 78 aa7.38□□□□□ -1.23
CHMP7-203ENST00000517325 RNF213Q63HN8 5207 aa7.36□□□□□ -1.23
CHMP7-203ENST00000517325 MT1HP80294 61 aa7.33□□□□□ -1.24
CHMP7-203ENST00000517325 LUZP6Q538Z0 58 aa7.32□□□□□ -1.24
CHMP7-203ENST00000517325 LCE2AQ5TA79 106 aaPredicted RBP7.3□□□□□ -1.24
CHMP7-203ENST00000517325 M0R2T5 61 aa7.3□□□□□ -1.24
CHMP7-203ENST00000517325 SPRR2GQ9BYE4 73 aa7.23□□□□□ -1.25
CHMP7-203ENST00000517325 KRTAP19-1Q8IUB9 90 aa7.22□□□□□ -1.25
CHMP7-203ENST00000517325 MT2AP02795 61 aa7.16□□□□□ -1.26
CHMP7-203ENST00000517325 MT1FP04733 61 aa7.16□□□□□ -1.26
CHMP7-203ENST00000517325 PP632Q6XCG6 107 aa7.15□□□□□ -1.26
CHMP7-203ENST00000517325 KRTAP9-8Q9BYQ0 159 aa7.14□□□□□ -1.27
CHMP7-203ENST00000517325 KRTAP10-10P60014 251 aa7.12□□□□□ -1.27
CHMP7-203ENST00000517325 TNP1P09430 55 aa7.08□□□□□ -1.28
CHMP7-203ENST00000517325 KRTAP19-8Q3LI54 63 aa6.95□□□□□ -1.3
CHMP7-203ENST00000517325 KRTAP23-1A1A580 65 aa6.93□□□□□ -1.3
CHMP7-203ENST00000517325 MT1BP07438 61 aa6.88□□□□□ -1.31
CHMP7-203ENST00000517325 SPRR5A0A1B0GTR4 108 aa6.88□□□□□ -1.31
CHMP7-203ENST00000517325 KRTAP9-3Q9BYQ3 159 aa6.84□□□□□ -1.31
CHMP7-203ENST00000517325 KRTAP10-5P60370 271 aa6.79□□□□□ -1.32
CHMP7-203ENST00000517325 MT1XP80297 61 aa6.78□□□□□ -1.32
CHMP7-203ENST00000517325 LCE3AQ5TA76 89 aa6.77□□□□□ -1.33
CHMP7-203ENST00000517325 KRTAP8-1Q8IUC2 63 aa6.59□□□□□ -1.36
CHMP7-203ENST00000517325 KRTAP10-7P60409 375 aaPredicted RBP6.58□□□□□ -1.36
CHMP7-203ENST00000517325 KRTAP10-12P60413 245 aa6.57□□□□□ -1.36
CHMP7-203ENST00000517325 PRO2289Q9P1D8 64 aa6.52□□□□□ -1.37
CHMP7-203ENST00000517325 USH2AO75445 5202 aa6.47□□□□□ -1.37
CHMP7-203ENST00000517325 KRTAP12-3P60328 96 aa6.44□□□□□ -1.38
CHMP7-203ENST00000517325 INE1O15225 51 aa6.28□□□□□ -1.4
CHMP7-203ENST00000517325 KRTAP19-5Q3LI72 72 aa6.26□□□□□ -1.41
CHMP7-203ENST00000517325 KMT2DO14686 5537 aa6.25□□□□□ -1.41
CHMP7-203ENST00000517325 KRTAP4-8A0A0G2JLE6 195 aa6.22□□□□□ -1.41
CHMP7-203ENST00000517325 KRTAP4-8Q9BYQ9 185 aa6.22□□□□□ -1.41
CHMP7-203ENST00000517325 SSPOA2VEC9 5147 aa6.11□□□□□ -1.43
CHMP7-203ENST00000517325 LOC100996750A0A140TA64 210 aa6.08□□□□□ -1.44
CHMP7-203ENST00000517325 KRTAP4-6Q9BYQ5 205 aa6.08□□□□□ -1.44
CHMP7-203ENST00000517325 LCE3CQ5T5A8 94 aa6.05□□□□□ -1.44
CHMP7-203ENST00000517325 KRTAP19-7Q3SYF9 63 aa6.05□□□□□ -1.44
CHMP7-203ENST00000517325 KRTAP19-6Q3LI70 58 aa5.98□□□□□ -1.45
CHMP7-203ENST00000517325 FSIP2Q5CZC0 6907 aa5.94□□□□□ -1.46
CHMP7-203ENST00000517325 MT1EP04732 61 aa5.88□□□□□ -1.47
CHMP7-203ENST00000517325 KRTAP4-7Q9BYR0 210 aa5.86□□□□□ -1.47
CHMP7-203ENST00000517325 KRTAP9-6A8MVA2 160 aa5.85□□□□□ -1.47
CHMP7-203ENST00000517325 MT1LQ93083 61 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms