RNA–Protein interactions for RNA: ENST00000515527.1

SMAD1-216, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 632 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-216ENST00000515527 SNCGO76070 127 aa5.06□□□□□ -1.6
SMAD1-216ENST00000515527 CCDC179H3BU77 68 aa5.05□□□□□ -1.6
SMAD1-216ENST00000515527 CHCHD1Q96BP2 118 aaKnown RBP5.05□□□□□ -1.6
SMAD1-216ENST00000515527 A8MUN3 132 aa5.04□□□□□ -1.6
SMAD1-216ENST00000515527 SYS1-DBNDD2H3BUS1 97 aa5.03□□□□□ -1.6
SMAD1-216ENST00000515527 MT-ATP8P03928 68 aa5.03□□□□□ -1.6
SMAD1-216ENST00000515527 TRBV7-4A0A0J9YYF1 115 aa5.01□□□□□ -1.61
SMAD1-216ENST00000515527 UQCRQO14949 82 aa5.01□□□□□ -1.61
SMAD1-216ENST00000515527 C7orf65Q6ZTY9 151 aa5.01□□□□□ -1.61
SMAD1-216ENST00000515527 COX8AP10176 69 aa5□□□□□ -1.61
SMAD1-216ENST00000515527 ATOH7Q8N100 152 aa5□□□□□ -1.61
SMAD1-216ENST00000515527 H0YAA0 97 aa4.99□□□□□ -1.61
SMAD1-216ENST00000515527 TMEM258P61165 79 aa4.99□□□□□ -1.61
SMAD1-216ENST00000515527 ETDBQ3ZM63 59 aa4.99□□□□□ -1.61
SMAD1-216ENST00000515527 C2orf91Q6ZV80 131 aa4.99□□□□□ -1.61
SMAD1-216ENST00000515527 MUSTN1Q8IVN3 82 aa4.99□□□□□ -1.61
SMAD1-216ENST00000515527 NAA38Q9BRA0 125 aaKnown RBP4.99□□□□□ -1.61
SMAD1-216ENST00000515527 TTTY13Q9BZ97 58 aa4.99□□□□□ -1.61
SMAD1-216ENST00000515527 KRTAP20-2Q3LI61 65 aa4.98□□□□□ -1.61
SMAD1-216ENST00000515527 LEPROTL1O95214 131 aa4.97□□□□□ -1.61
SMAD1-216ENST00000515527 SCGB1D4Q6XE38 83 aa4.96□□□□□ -1.62
SMAD1-216ENST00000515527 TRACP01848 142 aa4.95□□□□□ -1.62
SMAD1-216ENST00000515527 C8orf17Q9NRJ1 99 aa4.95□□□□□ -1.62
SMAD1-216ENST00000515527 HIGD1BQ9P298 99 aa4.95□□□□□ -1.62
SMAD1-216ENST00000515527 ANKRD29Q8N6D5 301 aa4.94□□□□□ -1.62
SMAD1-216ENST00000515527 NDUFB1O75438 58 aa4.93□□□□□ -1.62
SMAD1-216ENST00000515527 Q6ZVQ6 151 aa4.93□□□□□ -1.62
SMAD1-216ENST00000515527 KRTAP3-1Q9BYR8 98 aa4.93□□□□□ -1.62
SMAD1-216ENST00000515527 K7EQZ3 153 aa4.92□□□□□ -1.62
SMAD1-216ENST00000515527 SCGB1C2P0DMR2 95 aa4.92□□□□□ -1.62
SMAD1-216ENST00000515527 PRO0461Q9UI25 63 aa4.92□□□□□ -1.62
SMAD1-216ENST00000515527 MT1EP04732 61 aa4.91□□□□□ -1.62
SMAD1-216ENST00000515527 PMAIP1Q13794 54 aa4.91□□□□□ -1.62
SMAD1-216ENST00000515527 COX7CP15954 63 aa4.9□□□□□ -1.63
SMAD1-216ENST00000515527 FAM240AA0A1B0GVK7 77 aa4.88□□□□□ -1.63
SMAD1-216ENST00000515527 CCKP06307 115 aa4.88□□□□□ -1.63
SMAD1-216ENST00000515527 KRTAP19-7Q3SYF9 63 aa4.88□□□□□ -1.63
SMAD1-216ENST00000515527 LINC01545Q5VT33 79 aa4.88□□□□□ -1.63
SMAD1-216ENST00000515527 CEND1Q8N111 149 aa4.88□□□□□ -1.63
SMAD1-216ENST00000515527 KRTAP4-2Q9BYR5 136 aa4.88□□□□□ -1.63
SMAD1-216ENST00000515527 ACYP1P07311 99 aa4.87□□□□□ -1.63
SMAD1-216ENST00000515527 ATOX1O00244 68 aa4.86□□□□□ -1.63
SMAD1-216ENST00000515527 PP632Q6XCG6 107 aa4.86□□□□□ -1.63
SMAD1-216ENST00000515527 SMIM26A0A096LP01 95 aa4.85□□□□□ -1.63
SMAD1-216ENST00000515527 NDUFS5O43920 106 aa4.85□□□□□ -1.63
SMAD1-216ENST00000515527 MT1GP13640 62 aa4.85□□□□□ -1.63
SMAD1-216ENST00000515527 KRTAP4-11Q9BYQ6 195 aa4.85□□□□□ -1.63
SMAD1-216ENST00000515527 SERP1Q9Y6X1 66 aa4.85□□□□□ -1.63
SMAD1-216ENST00000515527 C1orf64Q8NEQ6 169 aa4.84□□□□□ -1.63
SMAD1-216ENST00000515527 MRPL34Q9BQ48 92 aaKnown RBP4.81□□□□□ -1.64
SMAD1-216ENST00000515527 H3BT86 120 aa4.8□□□□□ -1.64
SMAD1-216ENST00000515527 KRTAP5-8O75690 187 aa4.79□□□□□ -1.64
SMAD1-216ENST00000515527 Q5W150 140 aa4.79□□□□□ -1.64
SMAD1-216ENST00000515527 PSMB2P49721 201 aa4.78□□□□□ -1.64
SMAD1-216ENST00000515527 ATP5EP56381 51 aaPredicted RBP4.78□□□□□ -1.64
SMAD1-216ENST00000515527 LINC00643Q86TS7 51 aa4.78□□□□□ -1.64
SMAD1-216ENST00000515527 BRK1Q8WUW1 75 aa4.78□□□□□ -1.64
SMAD1-216ENST00000515527 FXYD2P54710 66 aa4.77□□□□□ -1.65
SMAD1-216ENST00000515527 SERP2Q8N6R1 65 aa4.77□□□□□ -1.65
SMAD1-216ENST00000515527 MT1MQ8N339 61 aa4.76□□□□□ -1.65
SMAD1-216ENST00000515527 TMEM254Q8TBM7 123 aa4.76□□□□□ -1.65
SMAD1-216ENST00000515527 HIST1H4GQ99525 98 aa4.74□□□□□ -1.65
SMAD1-216ENST00000515527 hDV103S1A0JD37 113 aa4.73□□□□□ -1.65
SMAD1-216ENST00000515527 K7ERJ3 54 aa4.72□□□□□ -1.65
SMAD1-216ENST00000515527 HIST1H4AP62805 103 aaKnown RBP4.72□□□□□ -1.65
SMAD1-216ENST00000515527 ATXN8Q156A1 80 aa4.72□□□□□ -1.65
SMAD1-216ENST00000515527 KRTAP4-3Q9BYR4 195 aa4.72□□□□□ -1.65
SMAD1-216ENST00000515527 ADM2Q7Z4H4 148 aa4.71□□□□□ -1.66
SMAD1-216ENST00000515527 NDUFC1O43677 76 aa4.7□□□□□ -1.66
SMAD1-216ENST00000515527 R4GN34 69 aa4.7□□□□□ -1.66
SMAD1-216ENST00000515527 A0A0B4J2C4 111 aa4.69□□□□□ -1.66
SMAD1-216ENST00000515527 H0YGX0 51 aa4.69□□□□□ -1.66
SMAD1-216ENST00000515527 MMP24-AS1A0A0U1RRL7 71 aa4.68□□□□□ -1.66
SMAD1-216ENST00000515527 KRTAP23-1A1A580 65 aa4.67□□□□□ -1.66
SMAD1-216ENST00000515527 KRTAP12-4P60329 112 aa4.67□□□□□ -1.66
SMAD1-216ENST00000515527 LINC01554Q52M75 96 aa4.66□□□□□ -1.66
SMAD1-216ENST00000515527 KTN1-AS1Q86SY8 53 aa4.66□□□□□ -1.66
SMAD1-216ENST00000515527 COX6CP09669 75 aa4.65□□□□□ -1.67
SMAD1-216ENST00000515527 PRO1854Q9UHT4 67 aa4.65□□□□□ -1.67
SMAD1-216ENST00000515527 A0A087WVE0 104 aa4.62□□□□□ -1.67
SMAD1-216ENST00000515527 Q6ZQT0 140 aa4.62□□□□□ -1.67
SMAD1-216ENST00000515527 M0QZ58 72 aa4.61□□□□□ -1.67
SMAD1-216ENST00000515527 ATP5EP2Q5VTU8 51 aa4.59□□□□□ -1.67
SMAD1-216ENST00000515527 ORMDL1Q9P0S3 153 aa4.57□□□□□ -1.68
SMAD1-216ENST00000515527 TRAV7A0A075B6U4 112 aa4.56□□□□□ -1.68
SMAD1-216ENST00000515527 HCG22E2RYF7 251 aa4.56□□□□□ -1.68
SMAD1-216ENST00000515527 H7BZZ5 65 aa4.55□□□□□ -1.68
SMAD1-216ENST00000515527 CXCL6P80162 114 aa4.55□□□□□ -1.68
SMAD1-216ENST00000515527 Q1T7F1 81 aa4.54□□□□□ -1.68
SMAD1-216ENST00000515527 H3BQ85 93 aa4.53□□□□□ -1.68
SMAD1-216ENST00000515527 TMEM256-PLSCR3K7ERE1 68 aa4.53□□□□□ -1.68
SMAD1-216ENST00000515527 DNAL4O96015 105 aa4.53□□□□□ -1.68
SMAD1-216ENST00000515527 KRTAP19-5Q3LI72 72 aa4.51□□□□□ -1.69
SMAD1-216ENST00000515527 C20orf197Q8N268 126 aa4.51□□□□□ -1.69
SMAD1-216ENST00000515527 MT1LQ93083 61 aa4.51□□□□□ -1.69
SMAD1-216ENST00000515527 MP68P56378 58 aa4.49□□□□□ -1.69
SMAD1-216ENST00000515527 SYNE1Q8NF91 8797 aaKnown RBP4.49□□□□□ -1.69
SMAD1-216ENST00000515527 KRTAP5-2Q701N4 177 aa4.48□□□□□ -1.69
SMAD1-216ENST00000515527 TRIAP1O43715 76 aa4.45□□□□□ -1.7
SMAD1-216ENST00000515527 A0A0A0MQY5 61 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms