RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 KRTAP13-3Q3SY46 172 aa4.14□□□□□ -1.75
PDLIM5-219ENST00000514743 SPINK1P00995 79 aa4.14□□□□□ -1.75
PDLIM5-219ENST00000514743 C10orf95Q9H7T3 257 aa4.13□□□□□ -1.75
PDLIM5-219ENST00000514743 RYR2Q92736 4967 aa4.12□□□□□ -1.75
PDLIM5-219ENST00000514743 A0A1B0GU33 70 aa4.11□□□□□ -1.75
PDLIM5-219ENST00000514743 FAT1Q14517 4588 aa4.11□□□□□ -1.75
PDLIM5-219ENST00000514743 KMT2CQ8NEZ4 4911 aaKnown RBP4.08□□□□□ -1.76
PDLIM5-219ENST00000514743 H1FX-AS1Q4G0G2 97 aa4.06□□□□□ -1.76
PDLIM5-219ENST00000514743 IGKV2D-30A0A075B6S6 120 aa4.04□□□□□ -1.76
PDLIM5-219ENST00000514743 IGKV2-30P06310 120 aa4.04□□□□□ -1.76
PDLIM5-219ENST00000514743 A0A1B0GVY2 172 aa4.03□□□□□ -1.76
PDLIM5-219ENST00000514743 KRTAP10-4P60372 401 aaPredicted RBP4.02□□□□□ -1.77
PDLIM5-219ENST00000514743 TYMSOSQ8TAI1 123 aa4.02□□□□□ -1.77
PDLIM5-219ENST00000514743 TNXBP22105 4242 aa3.99□□□□□ -1.77
PDLIM5-219ENST00000514743 FAT3Q8TDW7 4589 aa3.99□□□□□ -1.77
PDLIM5-219ENST00000514743 RYR3Q15413 4870 aa3.99□□□□□ -1.77
PDLIM5-219ENST00000514743 SMR3BP02814 79 aaPredicted RBP3.99□□□□□ -1.77
PDLIM5-219ENST00000514743 RPS29P62273 56 aaKnown RBP3.98□□□□□ -1.77
PDLIM5-219ENST00000514743 HSPG2P98160 4391 aa3.97□□□□□ -1.77
PDLIM5-219ENST00000514743 LRP1Q07954 4544 aaKnown RBP3.96□□□□□ -1.78
PDLIM5-219ENST00000514743 Q8N1X5 172 aa3.96□□□□□ -1.78
PDLIM5-219ENST00000514743 RPL37P61927 97 aaKnown RBP3.96□□□□□ -1.78
PDLIM5-219ENST00000514743 C9orf92A6NGG3 77 aa3.93□□□□□ -1.78
PDLIM5-219ENST00000514743 RYR1P21817 5038 aa3.92□□□□□ -1.78
PDLIM5-219ENST00000514743 COX6B2Q6YFQ2 88 aa3.91□□□□□ -1.78
PDLIM5-219ENST00000514743 PRO2289Q9P1D8 64 aa3.9□□□□□ -1.78
PDLIM5-219ENST00000514743 PLAC4Q8WY50 150 aa3.89□□□□□ -1.79
PDLIM5-219ENST00000514743 A0A0D9SG42 100 aa3.89□□□□□ -1.79
PDLIM5-219ENST00000514743 R4GN34 69 aa3.87□□□□□ -1.79
PDLIM5-219ENST00000514743 KRTAP17-1Q9BYP8 105 aa3.85□□□□□ -1.79
PDLIM5-219ENST00000514743 KIAA1109Q2LD37 5005 aa3.84□□□□□ -1.8
PDLIM5-219ENST00000514743 MYCBP2O75592 4640 aa3.83□□□□□ -1.8
PDLIM5-219ENST00000514743 DMBT1Q9UGM3 2413 aaPredicted RBP3.83□□□□□ -1.8
PDLIM5-219ENST00000514743 EPPK1P58107 5090 aaKnown RBP3.83□□□□□ -1.8
PDLIM5-219ENST00000514743 KRTAP10-8P60410 259 aa3.82□□□□□ -1.8
PDLIM5-219ENST00000514743 Q5VSD8 79 aa3.8□□□□□ -1.8
PDLIM5-219ENST00000514743 S4R3F8 94 aa3.77□□□□□ -1.81
PDLIM5-219ENST00000514743 LPAP08519 4548 aa3.77□□□□□ -1.81
PDLIM5-219ENST00000514743 XP32Q5T750 250 aa3.76□□□□□ -1.81
PDLIM5-219ENST00000514743 ABCA13Q86UQ4 5058 aa3.74□□□□□ -1.81
PDLIM5-219ENST00000514743 MT1HL1P0DM35 61 aa3.73□□□□□ -1.81
PDLIM5-219ENST00000514743 KRTAP13-4Q3LI77 160 aa3.73□□□□□ -1.81
PDLIM5-219ENST00000514743 LRP2P98164 4655 aa3.72□□□□□ -1.81
PDLIM5-219ENST00000514743 LOC100996750A0A140TA64 210 aa3.68□□□□□ -1.82
PDLIM5-219ENST00000514743 KRTAP12-2P59991 146 aa3.68□□□□□ -1.82
PDLIM5-219ENST00000514743 KRTAP4-6Q9BYQ5 205 aa3.68□□□□□ -1.82
PDLIM5-219ENST00000514743 INE1O15225 51 aa3.64□□□□□ -1.83
PDLIM5-219ENST00000514743 MUC17Q685J3 4493 aa3.63□□□□□ -1.83
PDLIM5-219ENST00000514743 KRTAP10-6P60371 365 aaPredicted RBP3.63□□□□□ -1.83
PDLIM5-219ENST00000514743 KRTAP4-5Q9BYR2 181 aa3.62□□□□□ -1.83
PDLIM5-219ENST00000514743 KRTAP12-1P59990 96 aa3.6□□□□□ -1.83
PDLIM5-219ENST00000514743 HERC2O95714 4834 aa3.56□□□□□ -1.84
PDLIM5-219ENST00000514743 LCE4AQ5TA78 99 aa3.54□□□□□ -1.84
PDLIM5-219ENST00000514743 BIRC6Q9NR09 4857 aa3.5□□□□□ -1.85
PDLIM5-219ENST00000514743 KRTAP9-4Q9BYQ2 154 aa3.48□□□□□ -1.85
PDLIM5-219ENST00000514743 KRTAP4-1Q9BYQ7 146 aa3.47□□□□□ -1.85
PDLIM5-219ENST00000514743 KRTAP9-6A0A140TA67 174 aa3.45□□□□□ -1.86
PDLIM5-219ENST00000514743 KRTAP9-7A8MTY7 169 aa3.45□□□□□ -1.86
PDLIM5-219ENST00000514743 KRTAP19-4Q3LI73 84 aa3.45□□□□□ -1.86
PDLIM5-219ENST00000514743 MUC2Q02817 5179 aa3.44□□□□□ -1.86
PDLIM5-219ENST00000514743 PP632Q6XCG6 107 aa3.44□□□□□ -1.86
PDLIM5-219ENST00000514743 KRTAP19-2Q3LHN2 52 aa3.43□□□□□ -1.86
PDLIM5-219ENST00000514743 PCLOQ9Y6V0 5065 aa3.43□□□□□ -1.86
PDLIM5-219ENST00000514743 HERC1Q15751 4861 aa3.41□□□□□ -1.86
PDLIM5-219ENST00000514743 KRTAP9-9Q9BYP9 154 aa3.41□□□□□ -1.86
PDLIM5-219ENST00000514743 HMCN2Q8NDA2 5059 aa3.41□□□□□ -1.86
PDLIM5-219ENST00000514743 FLGP20930 4061 aaPredicted RBP3.41□□□□□ -1.86
PDLIM5-219ENST00000514743 SPRR5A0A1B0GTR4 108 aa3.4□□□□□ -1.87
PDLIM5-219ENST00000514743 M0QZ58 72 aa3.39□□□□□ -1.87
PDLIM5-219ENST00000514743 LCE5AQ5TCM9 118 aa3.36□□□□□ -1.87
PDLIM5-219ENST00000514743 KRTAP4-8Q9BYQ9 185 aa3.32□□□□□ -1.88
PDLIM5-219ENST00000514743 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.31□□□□□ -1.88
PDLIM5-219ENST00000514743 KRTAP9-2Q9BYQ4 174 aa3.29□□□□□ -1.88
PDLIM5-219ENST00000514743 FAT4Q6V0I7 4981 aa3.29□□□□□ -1.88
PDLIM5-219ENST00000514743 KRTAP19-1Q8IUB9 90 aa3.26□□□□□ -1.89
PDLIM5-219ENST00000514743 LCE3BQ5TA77 95 aa3.25□□□□□ -1.89
PDLIM5-219ENST00000514743 RNF213Q63HN8 5207 aa3.24□□□□□ -1.89
PDLIM5-219ENST00000514743 UBR4Q5T4S7 5183 aa3.23□□□□□ -1.89
PDLIM5-219ENST00000514743 KRTAP9-3Q9BYQ3 159 aa3.15□□□□□ -1.91
PDLIM5-219ENST00000514743 MT1HP80294 61 aa3.12□□□□□ -1.91
PDLIM5-219ENST00000514743 HMCN1Q96RW7 5635 aa3.12□□□□□ -1.91
PDLIM5-219ENST00000514743 SPRR2GQ9BYE4 73 aa3.1□□□□□ -1.91
PDLIM5-219ENST00000514743 KRTAP4-8A0A0G2JLE6 195 aa3.1□□□□□ -1.91
PDLIM5-219ENST00000514743 KRTAP4-12Q9BQ66 201 aa3.09□□□□□ -1.92
PDLIM5-219ENST00000514743 TNP1P09430 55 aa3.08□□□□□ -1.92
PDLIM5-219ENST00000514743 MT1FP04733 61 aa3.06□□□□□ -1.92
PDLIM5-219ENST00000514743 MT2AP02795 61 aa3.06□□□□□ -1.92
PDLIM5-219ENST00000514743 KRTAP9-8Q9BYQ0 159 aa3.06□□□□□ -1.92
PDLIM5-219ENST00000514743 M0R2T5 61 aa3.05□□□□□ -1.92
PDLIM5-219ENST00000514743 LCE1FQ5T754 118 aa3.01□□□□□ -1.93
PDLIM5-219ENST00000514743 KRTAP10-10P60014 251 aa3□□□□□ -1.93
PDLIM5-219ENST00000514743 KRTAP4-7Q9BYR0 210 aa2.99□□□□□ -1.93
PDLIM5-219ENST00000514743 KRTAP19-8Q3LI54 63 aa2.98□□□□□ -1.93
PDLIM5-219ENST00000514743 LCE1DQ5T752 114 aa2.97□□□□□ -1.93
PDLIM5-219ENST00000514743 MT1BP07438 61 aa2.95□□□□□ -1.94
PDLIM5-219ENST00000514743 LCE1AQ5T7P2 110 aa2.93□□□□□ -1.94
PDLIM5-219ENST00000514743 KRTAP10-5P60370 271 aa2.92□□□□□ -1.94
PDLIM5-219ENST00000514743 LCE3AQ5TA76 89 aa2.92□□□□□ -1.94
PDLIM5-219ENST00000514743 MT1XP80297 61 aa2.91□□□□□ -1.94
PDLIM5-219ENST00000514743 LCE3CQ5T5A8 94 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms