RNA–Protein interactions for RNA: ENST00000514705.5

TSPAN17-208, Transcript of tetraspanin 17, humanhuman

TSL 2

Gene TSPAN17, Length 4,445 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-208ENST00000514705 R4GN34 69 aa7.1□□□□□ -1.27
TSPAN17-208ENST00000514705 XP32Q5T750 250 aa7.09□□□□□ -1.27
TSPAN17-208ENST00000514705 KRTAP13-4Q3LI77 160 aa7.09□□□□□ -1.28
TSPAN17-208ENST00000514705 DNAH6Q9C0G6 4158 aa7.08□□□□□ -1.28
TSPAN17-208ENST00000514705 TPRXLQ17RH7 258 aa7.05□□□□□ -1.28
TSPAN17-208ENST00000514705 KRTAP10-6P60371 365 aaPredicted RBP7.04□□□□□ -1.28
TSPAN17-208ENST00000514705 M0R2T5 61 aa7.02□□□□□ -1.29
TSPAN17-208ENST00000514705 DNAH5Q8TE73 4624 aa7.01□□□□□ -1.29
TSPAN17-208ENST00000514705 KRTAP12-2P59991 146 aa6.99□□□□□ -1.29
TSPAN17-208ENST00000514705 DYNC2H1Q8NCM8 4307 aaKnown RBP6.99□□□□□ -1.29
TSPAN17-208ENST00000514705 VPS13BQ7Z7G8 4022 aa6.98□□□□□ -1.29
TSPAN17-208ENST00000514705 FAT1Q14517 4588 aa6.97□□□□□ -1.29
TSPAN17-208ENST00000514705 KRTAP10-4P60372 401 aaPredicted RBP6.95□□□□□ -1.3
TSPAN17-208ENST00000514705 KRTAP3-3Q9BYR6 98 aa6.94□□□□□ -1.3
TSPAN17-208ENST00000514705 KRTAP3-2Q9BYR7 98 aa6.91□□□□□ -1.3
TSPAN17-208ENST00000514705 KRTAP12-1P59990 96 aa6.87□□□□□ -1.31
TSPAN17-208ENST00000514705 KRTAP4-5Q9BYR2 181 aa6.87□□□□□ -1.31
TSPAN17-208ENST00000514705 DYNC1H1Q14204 4646 aaKnown RBP6.86□□□□□ -1.31
TSPAN17-208ENST00000514705 MT1HL1P0DM35 61 aa6.84□□□□□ -1.31
TSPAN17-208ENST00000514705 MYCBP2O75592 4640 aa6.77□□□□□ -1.33
TSPAN17-208ENST00000514705 HYDINQ4G0P3 5121 aa6.77□□□□□ -1.33
TSPAN17-208ENST00000514705 SACSQ9NZJ4 4579 aa6.77□□□□□ -1.33
TSPAN17-208ENST00000514705 PLAC4Q8WY50 150 aa6.75□□□□□ -1.33
TSPAN17-208ENST00000514705 PKHD1P08F94 4074 aa6.7□□□□□ -1.34
TSPAN17-208ENST00000514705 RYR2Q92736 4967 aa6.7□□□□□ -1.34
TSPAN17-208ENST00000514705 KRTAP15-1Q3LI76 137 aa6.68□□□□□ -1.34
TSPAN17-208ENST00000514705 FAT2Q9NYQ8 4349 aa6.67□□□□□ -1.34
TSPAN17-208ENST00000514705 KIAA1109Q2LD37 5005 aa6.65□□□□□ -1.35
TSPAN17-208ENST00000514705 RYR3Q15413 4870 aa6.63□□□□□ -1.35
TSPAN17-208ENST00000514705 LRP1Q07954 4544 aaKnown RBP6.62□□□□□ -1.35
TSPAN17-208ENST00000514705 PKD1P98161 4303 aa6.57□□□□□ -1.36
TSPAN17-208ENST00000514705 RYR1P21817 5038 aa6.57□□□□□ -1.36
TSPAN17-208ENST00000514705 KMT2CQ8NEZ4 4911 aaKnown RBP6.57□□□□□ -1.36
TSPAN17-208ENST00000514705 APOBP04114 4563 aaKnown RBP6.56□□□□□ -1.36
TSPAN17-208ENST00000514705 KRTAP17-1Q9BYP8 105 aa6.48□□□□□ -1.37
TSPAN17-208ENST00000514705 FAT3Q8TDW7 4589 aa6.47□□□□□ -1.37
TSPAN17-208ENST00000514705 PP632Q6XCG6 107 aa6.46□□□□□ -1.37
TSPAN17-208ENST00000514705 TNP1P09430 55 aa6.46□□□□□ -1.38
TSPAN17-208ENST00000514705 LORP23490 312 aaPredicted RBP6.43□□□□□ -1.38
TSPAN17-208ENST00000514705 HSPG2P98160 4391 aa6.38□□□□□ -1.39
TSPAN17-208ENST00000514705 BIRC6Q9NR09 4857 aa6.35□□□□□ -1.39
TSPAN17-208ENST00000514705 LRP2P98164 4655 aa6.34□□□□□ -1.4
TSPAN17-208ENST00000514705 HERC2O95714 4834 aa6.29□□□□□ -1.4
TSPAN17-208ENST00000514705 KRTAP10-10P60014 251 aa6.26□□□□□ -1.41
TSPAN17-208ENST00000514705 PKHD1L1Q86WI1 4243 aa6.26□□□□□ -1.41
TSPAN17-208ENST00000514705 EPPK1P58107 5090 aaKnown RBP6.26□□□□□ -1.41
TSPAN17-208ENST00000514705 KRTAP4-1Q9BYQ7 146 aa6.17□□□□□ -1.42
TSPAN17-208ENST00000514705 TNXBP22105 4242 aa6.14□□□□□ -1.43
TSPAN17-208ENST00000514705 LPAP08519 4548 aa6.12□□□□□ -1.43
TSPAN17-208ENST00000514705 ABCA13Q86UQ4 5058 aa6.03□□□□□ -1.44
TSPAN17-208ENST00000514705 PRO2289Q9P1D8 64 aa5.98□□□□□ -1.45
TSPAN17-208ENST00000514705 HERC1Q15751 4861 aa5.86□□□□□ -1.47
TSPAN17-208ENST00000514705 PCLOQ9Y6V0 5065 aa5.85□□□□□ -1.47
TSPAN17-208ENST00000514705 LCE3AQ5TA76 89 aa5.83□□□□□ -1.48
TSPAN17-208ENST00000514705 MT1HP80294 61 aa5.83□□□□□ -1.48
TSPAN17-208ENST00000514705 KRTAP23-1A1A580 65 aa5.79□□□□□ -1.48
TSPAN17-208ENST00000514705 MUC2Q02817 5179 aa5.73□□□□□ -1.49
TSPAN17-208ENST00000514705 KRTAP19-2Q3LHN2 52 aa5.66□□□□□ -1.5
TSPAN17-208ENST00000514705 MT2AP02795 61 aa5.65□□□□□ -1.51
TSPAN17-208ENST00000514705 SPRR2GQ9BYE4 73 aa5.62□□□□□ -1.51
TSPAN17-208ENST00000514705 KRTAP12-3P60328 96 aa5.62□□□□□ -1.51
TSPAN17-208ENST00000514705 KRTAP10-12P60413 245 aa5.62□□□□□ -1.51
TSPAN17-208ENST00000514705 KRTAP19-1Q8IUB9 90 aa5.59□□□□□ -1.52
TSPAN17-208ENST00000514705 MUC17Q685J3 4493 aa5.59□□□□□ -1.52
TSPAN17-208ENST00000514705 LCE2CQ5TA81 110 aa5.58□□□□□ -1.52
TSPAN17-208ENST00000514705 MT1FP04733 61 aa5.58□□□□□ -1.52
TSPAN17-208ENST00000514705 HMCN2Q8NDA2 5059 aa5.57□□□□□ -1.52
TSPAN17-208ENST00000514705 SPRR5A0A1B0GTR4 108 aa5.55□□□□□ -1.52
TSPAN17-208ENST00000514705 FLGP20930 4061 aaPredicted RBP5.53□□□□□ -1.52
TSPAN17-208ENST00000514705 INE1O15225 51 aa5.52□□□□□ -1.53
TSPAN17-208ENST00000514705 FAT4Q6V0I7 4981 aa5.5□□□□□ -1.53
TSPAN17-208ENST00000514705 RNF213Q63HN8 5207 aa5.49□□□□□ -1.53
TSPAN17-208ENST00000514705 UBR4Q5T4S7 5183 aa5.45□□□□□ -1.54
TSPAN17-208ENST00000514705 KRTAP8-1Q8IUC2 63 aa5.44□□□□□ -1.54
TSPAN17-208ENST00000514705 KRTAP9-8Q9BYQ0 159 aa5.41□□□□□ -1.54
TSPAN17-208ENST00000514705 KRTAP10-7P60409 375 aaPredicted RBP5.31□□□□□ -1.56
TSPAN17-208ENST00000514705 MT1XP80297 61 aa5.3□□□□□ -1.56
TSPAN17-208ENST00000514705 KRTAP10-5P60370 271 aa5.29□□□□□ -1.56
TSPAN17-208ENST00000514705 MT1BP07438 61 aa5.27□□□□□ -1.57
TSPAN17-208ENST00000514705 KRTAP19-8Q3LI54 63 aa5.27□□□□□ -1.57
TSPAN17-208ENST00000514705 KRTAP9-3Q9BYQ3 159 aa5.24□□□□□ -1.57
TSPAN17-208ENST00000514705 KRTAP19-5Q3LI72 72 aa5.22□□□□□ -1.57
TSPAN17-208ENST00000514705 CRCT1Q9UGL9 99 aa5.21□□□□□ -1.58
TSPAN17-208ENST00000514705 LCE2AQ5TA79 106 aaPredicted RBP5.2□□□□□ -1.58
TSPAN17-208ENST00000514705 LCE3CQ5T5A8 94 aa5.14□□□□□ -1.59
TSPAN17-208ENST00000514705 LCE2BO14633 110 aa5.09□□□□□ -1.59
TSPAN17-208ENST00000514705 KRTAP4-8A0A0G2JLE6 195 aa5.04□□□□□ -1.6
TSPAN17-208ENST00000514705 KRTAP4-8Q9BYQ9 185 aa5.04□□□□□ -1.6
TSPAN17-208ENST00000514705 FSIP2Q5CZC0 6907 aa5.01□□□□□ -1.61
TSPAN17-208ENST00000514705 KRTAP4-7Q9BYR0 210 aa4.92□□□□□ -1.62
TSPAN17-208ENST00000514705 KRTAP9-2Q9BYQ4 174 aa4.89□□□□□ -1.63
TSPAN17-208ENST00000514705 KMT2DO14686 5537 aa4.88□□□□□ -1.63
TSPAN17-208ENST00000514705 LCE2DQ5TA82 110 aaPredicted RBP4.87□□□□□ -1.63
TSPAN17-208ENST00000514705 SPRR2FQ96RM1 72 aa4.86□□□□□ -1.63
TSPAN17-208ENST00000514705 USH2AO75445 5202 aa4.86□□□□□ -1.63
TSPAN17-208ENST00000514705 KRTAP19-6Q3LI70 58 aa4.8□□□□□ -1.64
TSPAN17-208ENST00000514705 KRTAP9-6A8MVA2 160 aa4.75□□□□□ -1.65
TSPAN17-208ENST00000514705 KRTAP19-7Q3SYF9 63 aa4.66□□□□□ -1.66
TSPAN17-208ENST00000514705 MT1LQ93083 61 aa4.65□□□□□ -1.66
TSPAN17-208ENST00000514705 KRTAP19-4Q3LI73 84 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms