RNA–Protein interactions for RNA: ENST00000514588.1

CCND3-221, Transcript of cyclin D3, humanhuman

TSL 4

Gene CCND3, Length 490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-221ENST00000514588 MDN1Q9NU22 5596 aa10.37□□□□□ -0.75
CCND3-221ENST00000514588 TRAV22A0A0B4J277 110 aa10.35□□□□□ -0.75
CCND3-221ENST00000514588 LOC101927531A0A1B0GV80 90 aa10.35□□□□□ -0.75
CCND3-221ENST00000514588 ETDBQ3ZM63 59 aa10.29□□□□□ -0.76
CCND3-221ENST00000514588 H0YAA0 97 aa10.28□□□□□ -0.76
CCND3-221ENST00000514588 NDUFC1O43677 76 aa10.26□□□□□ -0.77
CCND3-221ENST00000514588 GTF2H5Q6ZYL4 71 aa10.26□□□□□ -0.77
CCND3-221ENST00000514588 F8W1H4 67 aa10.25□□□□□ -0.77
CCND3-221ENST00000514588 KRTAP2-3P0C7H8 128 aa10.17□□□□□ -0.78
CCND3-221ENST00000514588 KRTAP2-4Q9BYR9 128 aa10.17□□□□□ -0.78
CCND3-221ENST00000514588 UQCRQO14949 82 aa10.16□□□□□ -0.78
CCND3-221ENST00000514588 ADM2Q7Z4H4 148 aa10.16□□□□□ -0.78
CCND3-221ENST00000514588 H0Y9P7 68 aa10.15□□□□□ -0.78
CCND3-221ENST00000514588 SPRR2FQ96RM1 72 aa10.15□□□□□ -0.78
CCND3-221ENST00000514588 A8MUN3 132 aa10.14□□□□□ -0.79
CCND3-221ENST00000514588 ATOX1O00244 68 aa10.13□□□□□ -0.79
CCND3-221ENST00000514588 MT1XP80297 61 aa10.13□□□□□ -0.79
CCND3-221ENST00000514588 PRO2289Q9P1D8 64 aa10.13□□□□□ -0.79
CCND3-221ENST00000514588 ACYP1P07311 99 aa10.11□□□□□ -0.79
CCND3-221ENST00000514588 SPRR2EP22531 72 aa10.08□□□□□ -0.8
CCND3-221ENST00000514588 SPRR2BP35325 72 aa10.08□□□□□ -0.8
CCND3-221ENST00000514588 SPRR2AP35326 72 aa10.08□□□□□ -0.8
CCND3-221ENST00000514588 HIST1H4AP62805 103 aaKnown RBP10.07□□□□□ -0.8
CCND3-221ENST00000514588 ATP5EP2Q5VTU8 51 aa10.06□□□□□ -0.8
CCND3-221ENST00000514588 PLAC4Q8WY50 150 aa10.02□□□□□ -0.81
CCND3-221ENST00000514588 FAM240AA0A1B0GVK7 77 aa9.99□□□□□ -0.81
CCND3-221ENST00000514588 KRTAP8-1Q8IUC2 63 aa9.99□□□□□ -0.81
CCND3-221ENST00000514588 LINC00208Q96KT6 92 aa9.96□□□□□ -0.82
CCND3-221ENST00000514588 KRTAP12-2P59991 146 aa9.94□□□□□ -0.82
CCND3-221ENST00000514588 LCE1AQ5T7P2 110 aa9.93□□□□□ -0.82
CCND3-221ENST00000514588 R4GN34 69 aa9.92□□□□□ -0.82
CCND3-221ENST00000514588 P0C880 135 aa9.91□□□□□ -0.82
CCND3-221ENST00000514588 PCP4L1A6NKN8 68 aa9.88□□□□□ -0.83
CCND3-221ENST00000514588 M0QZ58 72 aa9.84□□□□□ -0.83
CCND3-221ENST00000514588 C20orf197Q8N268 126 aa9.83□□□□□ -0.84
CCND3-221ENST00000514588 MP68P56378 58 aa9.82□□□□□ -0.84
CCND3-221ENST00000514588 LINC00643Q86TS7 51 aa9.82□□□□□ -0.84
CCND3-221ENST00000514588 KRTAP2-2Q9BYT5 123 aa9.82□□□□□ -0.84
CCND3-221ENST00000514588 KRTAP2-1Q9BYU5 128 aa9.82□□□□□ -0.84
CCND3-221ENST00000514588 OCR1Q9BZK8 76 aa9.82□□□□□ -0.84
CCND3-221ENST00000514588 KRTAP4-8A0A0G2JLE6 195 aa9.81□□□□□ -0.84
CCND3-221ENST00000514588 KRTAP4-8Q9BYQ9 185 aa9.81□□□□□ -0.84
CCND3-221ENST00000514588 KRTAP3-2Q9BYR7 98 aa9.77□□□□□ -0.85
CCND3-221ENST00000514588 SPRR2DP22532 72 aa9.75□□□□□ -0.85
CCND3-221ENST00000514588 LINC01554Q52M75 96 aa9.72□□□□□ -0.85
CCND3-221ENST00000514588 DMAC1Q96GE9 116 aa9.71□□□□□ -0.86
CCND3-221ENST00000514588 KRTAP10-7P60409 375 aaPredicted RBP9.66□□□□□ -0.86
CCND3-221ENST00000514588 H3BPC8 53 aa9.64□□□□□ -0.87
CCND3-221ENST00000514588 KRTAP10-12P60413 245 aa9.61□□□□□ -0.87
CCND3-221ENST00000514588 LCE3BQ5TA77 95 aa9.51□□□□□ -0.89
CCND3-221ENST00000514588 TRAV7A0A075B6U4 112 aa9.48□□□□□ -0.89
CCND3-221ENST00000514588 SCGB1A1P11684 91 aa9.44□□□□□ -0.9
CCND3-221ENST00000514588 MT-ATP8P03928 68 aa9.43□□□□□ -0.9
CCND3-221ENST00000514588 ACYP2P14621 99 aa9.38□□□□□ -0.91
CCND3-221ENST00000514588 A0A1B0GV90 55 aa9.32□□□□□ -0.92
CCND3-221ENST00000514588 SPTSSBQ8NFR3 76 aa9.32□□□□□ -0.92
CCND3-221ENST00000514588 J3QR89 54 aa9.26□□□□□ -0.93
CCND3-221ENST00000514588 CHKB-CPT1BH3BT56 60 aa9.2□□□□□ -0.94
CCND3-221ENST00000514588 KRTAP13-4Q3LI77 160 aa9.12□□□□□ -0.95
CCND3-221ENST00000514588 SMIM20Q8N5G0 67 aa9.08□□□□□ -0.96
CCND3-221ENST00000514588 KRTAP19-7Q3SYF9 63 aa9.07□□□□□ -0.96
CCND3-221ENST00000514588 LCE5AQ5TCM9 118 aa9.07□□□□□ -0.96
CCND3-221ENST00000514588 CAMK2N1Q7Z7J9 78 aa9.07□□□□□ -0.96
CCND3-221ENST00000514588 DSTQ03001 7570 aaKnown RBP9.07□□□□□ -0.96
CCND3-221ENST00000514588 GPR98Q8WXG9 6306 aa9.06□□□□□ -0.96
CCND3-221ENST00000514588 MT1EP04732 61 aa9□□□□□ -0.97
CCND3-221ENST00000514588 SNURFQ9Y675 71 aa8.99□□□□□ -0.97
CCND3-221ENST00000514588 KRTAP19-3Q7Z4W3 81 aa8.98□□□□□ -0.97
CCND3-221ENST00000514588 KRTAP4-9Q9BYQ8 210 aa8.96□□□□□ -0.98
CCND3-221ENST00000514588 SPANXA2-OT1Q8N9U9 137 aa8.92□□□□□ -0.98
CCND3-221ENST00000514588 CYSTM1Q9H1C7 97 aa8.79□□□□□ -1
CCND3-221ENST00000514588 A0A0D9SG42 100 aa8.78□□□□□ -1
CCND3-221ENST00000514588 K7ERU9 68 aa8.74□□□□□ -1.01
CCND3-221ENST00000514588 KRTAP19-5Q3LI72 72 aa8.74□□□□□ -1.01
CCND3-221ENST00000514588 MT1GP13640 62 aa8.73□□□□□ -1.01
CCND3-221ENST00000514588 LCE1DQ5T752 114 aa8.71□□□□□ -1.02
CCND3-221ENST00000514588 COA5Q86WW8 74 aa8.7□□□□□ -1.02
CCND3-221ENST00000514588 SPATA8Q6RVD6 105 aa8.68□□□□□ -1.02
CCND3-221ENST00000514588 SERP2Q8N6R1 65 aa8.67□□□□□ -1.02
CCND3-221ENST00000514588 SEC61GP60059 68 aa8.66□□□□□ -1.02
CCND3-221ENST00000514588 SPINT4Q6UDR6 99 aa8.66□□□□□ -1.02
CCND3-221ENST00000514588 SERP1Q9Y6X1 66 aa8.65□□□□□ -1.02
CCND3-221ENST00000514588 PP632Q6XCG6 107 aa8.64□□□□□ -1.03
CCND3-221ENST00000514588 KRTAP12-1P59990 96 aa8.59□□□□□ -1.03
CCND3-221ENST00000514588 LCE4AQ5TA78 99 aa8.59□□□□□ -1.03
CCND3-221ENST00000514588 MT1MQ8N339 61 aa8.59□□□□□ -1.03
CCND3-221ENST00000514588 A0A1B0GU33 70 aa8.58□□□□□ -1.04
CCND3-221ENST00000514588 HMCN1Q96RW7 5635 aa8.56□□□□□ -1.04
CCND3-221ENST00000514588 MT4P47944 62 aa8.56□□□□□ -1.04
CCND3-221ENST00000514588 MT1LQ93083 61 aa8.54□□□□□ -1.04
CCND3-221ENST00000514588 KRTAP4-3Q9BYR4 195 aa8.42□□□□□ -1.06
CCND3-221ENST00000514588 KRTAP5-4Q6L8H1 288 aa8.39□□□□□ -1.07
CCND3-221ENST00000514588 AHNAK2Q8IVF2 5795 aa8.38□□□□□ -1.07
CCND3-221ENST00000514588 LCE3AQ5TA76 89 aa8.37□□□□□ -1.07
CCND3-221ENST00000514588 C10orf95Q9H7T3 257 aa8.37□□□□□ -1.07
CCND3-221ENST00000514588 SMIM26A0A096LP01 95 aa8.33□□□□□ -1.08
CCND3-221ENST00000514588 A8MU10 97 aa8.3□□□□□ -1.08
CCND3-221ENST00000514588 KRTAP4-6Q9BYQ5 205 aa8.3□□□□□ -1.08
CCND3-221ENST00000514588 COX7CP15954 63 aa8.28□□□□□ -1.08
CCND3-221ENST00000514588 H7BZZ5 65 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms