RNA–Protein interactions for RNA: ENST00000513588.5

CTNND2-215, Transcript of catenin delta 2, humanhuman

TSL 1 (best)

Gene CTNND2, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND2-215ENST00000513588 KRTAP10-8P60410 259 aa5.9□□□□□ -1.47
CTNND2-215ENST00000513588 ALMS1Q8TCU4 4167 aa5.87□□□□□ -1.47
CTNND2-215ENST00000513588 FAT1Q14517 4588 aa5.84□□□□□ -1.47
CTNND2-215ENST00000513588 J3QL48 77 aa5.82□□□□□ -1.48
CTNND2-215ENST00000513588 R4GN34 69 aa5.81□□□□□ -1.48
CTNND2-215ENST00000513588 DYNC1H1Q14204 4646 aaKnown RBP5.8□□□□□ -1.48
CTNND2-215ENST00000513588 M0QZ58 72 aa5.79□□□□□ -1.48
CTNND2-215ENST00000513588 KRTAP10-6P60371 365 aaPredicted RBP5.79□□□□□ -1.48
CTNND2-215ENST00000513588 HYDINQ4G0P3 5121 aa5.78□□□□□ -1.48
CTNND2-215ENST00000513588 KRTAP13-4Q3LI77 160 aa5.76□□□□□ -1.49
CTNND2-215ENST00000513588 SEC61BP60468 96 aaKnown RBP5.75□□□□□ -1.49
CTNND2-215ENST00000513588 KRTAP3-3Q9BYR6 98 aa5.75□□□□□ -1.49
CTNND2-215ENST00000513588 TPRXLQ17RH7 258 aa5.74□□□□□ -1.49
CTNND2-215ENST00000513588 SACSQ9NZJ4 4579 aa5.72□□□□□ -1.49
CTNND2-215ENST00000513588 PKHD1P08F94 4074 aa5.72□□□□□ -1.49
CTNND2-215ENST00000513588 FAT2Q9NYQ8 4349 aa5.7□□□□□ -1.5
CTNND2-215ENST00000513588 KRTAP3-2Q9BYR7 98 aa5.69□□□□□ -1.5
CTNND2-215ENST00000513588 PKD1P98161 4303 aa5.69□□□□□ -1.5
CTNND2-215ENST00000513588 KRTAP12-2P59991 146 aa5.67□□□□□ -1.5
CTNND2-215ENST00000513588 CAMK2N1Q7Z7J9 78 aa5.65□□□□□ -1.5
CTNND2-215ENST00000513588 MT1HL1P0DM35 61 aa5.63□□□□□ -1.51
CTNND2-215ENST00000513588 KRTAP12-1P59990 96 aa5.62□□□□□ -1.51
CTNND2-215ENST00000513588 MYCBP2O75592 4640 aa5.58□□□□□ -1.52
CTNND2-215ENST00000513588 APOBP04114 4563 aaKnown RBP5.57□□□□□ -1.52
CTNND2-215ENST00000513588 KMT2CQ8NEZ4 4911 aaKnown RBP5.57□□□□□ -1.52
CTNND2-215ENST00000513588 LRP1Q07954 4544 aaKnown RBP5.57□□□□□ -1.52
CTNND2-215ENST00000513588 KRTAP15-1Q3LI76 137 aa5.56□□□□□ -1.52
CTNND2-215ENST00000513588 RYR2Q92736 4967 aa5.49□□□□□ -1.53
CTNND2-215ENST00000513588 PLAC4Q8WY50 150 aa5.47□□□□□ -1.53
CTNND2-215ENST00000513588 FAT3Q8TDW7 4589 aa5.44□□□□□ -1.54
CTNND2-215ENST00000513588 KIAA1109Q2LD37 5005 aa5.43□□□□□ -1.54
CTNND2-215ENST00000513588 PKHD1L1Q86WI1 4243 aa5.39□□□□□ -1.55
CTNND2-215ENST00000513588 KRTAP17-1Q9BYP8 105 aa5.39□□□□□ -1.55
CTNND2-215ENST00000513588 KRTAP4-5Q9BYR2 181 aa5.39□□□□□ -1.55
CTNND2-215ENST00000513588 RYR1P21817 5038 aa5.38□□□□□ -1.55
CTNND2-215ENST00000513588 RYR3Q15413 4870 aa5.38□□□□□ -1.55
CTNND2-215ENST00000513588 M0R2T5 61 aa5.38□□□□□ -1.55
CTNND2-215ENST00000513588 HSPG2P98160 4391 aa5.34□□□□□ -1.55
CTNND2-215ENST00000513588 PP632Q6XCG6 107 aa5.31□□□□□ -1.56
CTNND2-215ENST00000513588 LRP2P98164 4655 aa5.3□□□□□ -1.56
CTNND2-215ENST00000513588 TNP1P09430 55 aa5.29□□□□□ -1.56
CTNND2-215ENST00000513588 LORP23490 312 aaPredicted RBP5.29□□□□□ -1.56
CTNND2-215ENST00000513588 TNXBP22105 4242 aa5.27□□□□□ -1.57
CTNND2-215ENST00000513588 EPPK1P58107 5090 aaKnown RBP5.26□□□□□ -1.57
CTNND2-215ENST00000513588 KRTAP4-1Q9BYQ7 146 aa5.21□□□□□ -1.58
CTNND2-215ENST00000513588 LPAP08519 4548 aa5.12□□□□□ -1.59
CTNND2-215ENST00000513588 HERC2O95714 4834 aa5.04□□□□□ -1.6
CTNND2-215ENST00000513588 KRTAP10-10P60014 251 aa5.04□□□□□ -1.6
CTNND2-215ENST00000513588 ABCA13Q86UQ4 5058 aa5.02□□□□□ -1.61
CTNND2-215ENST00000513588 BIRC6Q9NR09 4857 aa4.96□□□□□ -1.62
CTNND2-215ENST00000513588 KRTAP19-2Q3LHN2 52 aa4.87□□□□□ -1.63
CTNND2-215ENST00000513588 KRTAP23-1A1A580 65 aa4.86□□□□□ -1.63
CTNND2-215ENST00000513588 PRO2289Q9P1D8 64 aa4.81□□□□□ -1.64
CTNND2-215ENST00000513588 HERC1Q15751 4861 aa4.8□□□□□ -1.64
CTNND2-215ENST00000513588 SPRR2GQ9BYE4 73 aa4.79□□□□□ -1.64
CTNND2-215ENST00000513588 LCE3AQ5TA76 89 aa4.77□□□□□ -1.65
CTNND2-215ENST00000513588 MUC17Q685J3 4493 aa4.77□□□□□ -1.65
CTNND2-215ENST00000513588 PCLOQ9Y6V0 5065 aa4.76□□□□□ -1.65
CTNND2-215ENST00000513588 MUC2Q02817 5179 aa4.76□□□□□ -1.65
CTNND2-215ENST00000513588 MT1HP80294 61 aa4.73□□□□□ -1.65
CTNND2-215ENST00000513588 FLGP20930 4061 aaPredicted RBP4.73□□□□□ -1.65
CTNND2-215ENST00000513588 KRTAP19-1Q8IUB9 90 aa4.72□□□□□ -1.65
CTNND2-215ENST00000513588 MT2AP02795 61 aa4.7□□□□□ -1.66
CTNND2-215ENST00000513588 LCE2CQ5TA81 110 aa4.69□□□□□ -1.66
CTNND2-215ENST00000513588 MT1FP04733 61 aa4.68□□□□□ -1.66
CTNND2-215ENST00000513588 KRTAP10-12P60413 245 aa4.66□□□□□ -1.66
CTNND2-215ENST00000513588 KRTAP12-3P60328 96 aa4.62□□□□□ -1.67
CTNND2-215ENST00000513588 RNF213Q63HN8 5207 aa4.61□□□□□ -1.67
CTNND2-215ENST00000513588 FAT4Q6V0I7 4981 aa4.59□□□□□ -1.68
CTNND2-215ENST00000513588 HMCN2Q8NDA2 5059 aa4.57□□□□□ -1.68
CTNND2-215ENST00000513588 UBR4Q5T4S7 5183 aa4.57□□□□□ -1.68
CTNND2-215ENST00000513588 INE1O15225 51 aa4.56□□□□□ -1.68
CTNND2-215ENST00000513588 SPRR5A0A1B0GTR4 108 aa4.55□□□□□ -1.68
CTNND2-215ENST00000513588 KRTAP8-1Q8IUC2 63 aa4.54□□□□□ -1.68
CTNND2-215ENST00000513588 KRTAP9-8Q9BYQ0 159 aa4.53□□□□□ -1.68
CTNND2-215ENST00000513588 KRTAP19-8Q3LI54 63 aa4.52□□□□□ -1.69
CTNND2-215ENST00000513588 MT1BP07438 61 aa4.47□□□□□ -1.69
CTNND2-215ENST00000513588 MT1XP80297 61 aa4.47□□□□□ -1.69
CTNND2-215ENST00000513588 KRTAP10-5P60370 271 aa4.46□□□□□ -1.7
CTNND2-215ENST00000513588 KRTAP10-7P60409 375 aaPredicted RBP4.41□□□□□ -1.7
CTNND2-215ENST00000513588 KRTAP9-3Q9BYQ3 159 aa4.35□□□□□ -1.71
CTNND2-215ENST00000513588 KRTAP19-5Q3LI72 72 aa4.32□□□□□ -1.72
CTNND2-215ENST00000513588 LCE2DQ5TA82 110 aaPredicted RBP4.25□□□□□ -1.73
CTNND2-215ENST00000513588 LCE3CQ5T5A8 94 aa4.24□□□□□ -1.73
CTNND2-215ENST00000513588 LCE2BO14633 110 aa4.19□□□□□ -1.74
CTNND2-215ENST00000513588 KRTAP4-8A0A0G2JLE6 195 aa4.17□□□□□ -1.74
CTNND2-215ENST00000513588 KRTAP4-8Q9BYQ9 185 aa4.17□□□□□ -1.74
CTNND2-215ENST00000513588 FSIP2Q5CZC0 6907 aa4.1□□□□□ -1.75
CTNND2-215ENST00000513588 LCE2AQ5TA79 106 aaPredicted RBP4.03□□□□□ -1.76
CTNND2-215ENST00000513588 OBSCNQ5VST9 7968 aa4.03□□□□□ -1.76
CTNND2-215ENST00000513588 CRCT1Q9UGL9 99 aa4.02□□□□□ -1.77
CTNND2-215ENST00000513588 USH2AO75445 5202 aa4.02□□□□□ -1.77
CTNND2-215ENST00000513588 KRTAP4-7Q9BYR0 210 aa4□□□□□ -1.77
CTNND2-215ENST00000513588 KRTAP19-4Q3LI73 84 aa3.96□□□□□ -1.78
CTNND2-215ENST00000513588 KMT2DO14686 5537 aa3.95□□□□□ -1.78
CTNND2-215ENST00000513588 SYNE1Q8NF91 8797 aaKnown RBP3.95□□□□□ -1.78
CTNND2-215ENST00000513588 KRTAP19-7Q3SYF9 63 aa3.93□□□□□ -1.78
CTNND2-215ENST00000513588 MT1LQ93083 61 aa3.91□□□□□ -1.78
CTNND2-215ENST00000513588 MT1EP04732 61 aa3.89□□□□□ -1.79
CTNND2-215ENST00000513588 KRTAP9-6A8MVA2 160 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms