RNA–Protein interactions for RNA: ENST00000512853.5

SNX25-205, Transcript of sorting nexin 25, humanhuman

TSL 1 (best)

Gene SNX25, Length 1,937 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-205ENST00000512853 FAT3Q8TDW7 4589 aa5.95□□□□□ -1.46
SNX25-205ENST00000512853 RPL37P61927 97 aaKnown RBP5.94□□□□□ -1.46
SNX25-205ENST00000512853 TNXBP22105 4242 aa5.93□□□□□ -1.46
SNX25-205ENST00000512853 KRTAP21-3Q3LHN1 58 aa5.93□□□□□ -1.46
SNX25-205ENST00000512853 ROMO1P60602 79 aa5.92□□□□□ -1.46
SNX25-205ENST00000512853 KRTAP10-8P60410 259 aa5.91□□□□□ -1.46
SNX25-205ENST00000512853 KRTAP13-4Q3LI77 160 aa5.91□□□□□ -1.46
SNX25-205ENST00000512853 LCE2AQ5TA79 106 aaPredicted RBP5.89□□□□□ -1.47
SNX25-205ENST00000512853 S4R3F8 94 aa5.89□□□□□ -1.47
SNX25-205ENST00000512853 LRP1Q07954 4544 aaKnown RBP5.87□□□□□ -1.47
SNX25-205ENST00000512853 XP32Q5T750 250 aa5.87□□□□□ -1.47
SNX25-205ENST00000512853 HSPG2P98160 4391 aa5.86□□□□□ -1.47
SNX25-205ENST00000512853 RYR2Q92736 4967 aa5.86□□□□□ -1.47
SNX25-205ENST00000512853 CRIPTQ9P021 101 aa5.86□□□□□ -1.47
SNX25-205ENST00000512853 H3BS24 57 aa5.84□□□□□ -1.47
SNX25-205ENST00000512853 A0A0D9SG42 100 aa5.82□□□□□ -1.48
SNX25-205ENST00000512853 LCE2CQ5TA81 110 aa5.82□□□□□ -1.48
SNX25-205ENST00000512853 P0C880 135 aa5.8□□□□□ -1.48
SNX25-205ENST00000512853 DMBT1Q9UGM3 2413 aaPredicted RBP5.79□□□□□ -1.48
SNX25-205ENST00000512853 Q5VSD8 79 aa5.78□□□□□ -1.48
SNX25-205ENST00000512853 TPRXLQ17RH7 258 aa5.78□□□□□ -1.48
SNX25-205ENST00000512853 KRTAP12-2P59991 146 aa5.72□□□□□ -1.49
SNX25-205ENST00000512853 KRTAP12-1P59990 96 aa5.7□□□□□ -1.5
SNX25-205ENST00000512853 LORP23490 312 aaPredicted RBP5.69□□□□□ -1.5
SNX25-205ENST00000512853 MT1HL1P0DM35 61 aa5.68□□□□□ -1.5
SNX25-205ENST00000512853 C10orf95Q9H7T3 257 aa5.68□□□□□ -1.5
SNX25-205ENST00000512853 RYR1P21817 5038 aa5.66□□□□□ -1.5
SNX25-205ENST00000512853 M0QZ58 72 aa5.65□□□□□ -1.51
SNX25-205ENST00000512853 MYCBP2O75592 4640 aa5.64□□□□□ -1.51
SNX25-205ENST00000512853 KRTAP17-1Q9BYP8 105 aa5.64□□□□□ -1.51
SNX25-205ENST00000512853 SPINT4Q6UDR6 99 aa5.64□□□□□ -1.51
SNX25-205ENST00000512853 KMT2CQ8NEZ4 4911 aaKnown RBP5.62□□□□□ -1.51
SNX25-205ENST00000512853 KRTAP15-1Q3LI76 137 aa5.58□□□□□ -1.52
SNX25-205ENST00000512853 LOC100996750A0A140TA64 210 aa5.57□□□□□ -1.52
SNX25-205ENST00000512853 KRTAP4-6Q9BYQ5 205 aa5.57□□□□□ -1.52
SNX25-205ENST00000512853 LRP2P98164 4655 aa5.48□□□□□ -1.53
SNX25-205ENST00000512853 LPAP08519 4548 aa5.47□□□□□ -1.53
SNX25-205ENST00000512853 RYR3Q15413 4870 aa5.47□□□□□ -1.53
SNX25-205ENST00000512853 KIAA1109Q2LD37 5005 aa5.46□□□□□ -1.54
SNX25-205ENST00000512853 R4GN34 69 aa5.43□□□□□ -1.54
SNX25-205ENST00000512853 NDUFAF8A1L188 74 aa5.42□□□□□ -1.54
SNX25-205ENST00000512853 SEC61BP60468 96 aaKnown RBP5.38□□□□□ -1.55
SNX25-205ENST00000512853 MUC17Q685J3 4493 aa5.35□□□□□ -1.55
SNX25-205ENST00000512853 KRTAP4-1Q9BYQ7 146 aa5.31□□□□□ -1.56
SNX25-205ENST00000512853 KRTAP19-2Q3LHN2 52 aa5.29□□□□□ -1.56
SNX25-205ENST00000512853 KRTAP4-5Q9BYR2 181 aa5.27□□□□□ -1.57
SNX25-205ENST00000512853 ABCA13Q86UQ4 5058 aa5.26□□□□□ -1.57
SNX25-205ENST00000512853 PLAC4Q8WY50 150 aa5.25□□□□□ -1.57
SNX25-205ENST00000512853 EPPK1P58107 5090 aaKnown RBP5.23□□□□□ -1.57
SNX25-205ENST00000512853 PP632Q6XCG6 107 aa5.23□□□□□ -1.57
SNX25-205ENST00000512853 CAMK2N1Q7Z7J9 78 aa5.17□□□□□ -1.58
SNX25-205ENST00000512853 HERC1Q15751 4861 aa5.12□□□□□ -1.59
SNX25-205ENST00000512853 FLGP20930 4061 aaPredicted RBP5.08□□□□□ -1.6
SNX25-205ENST00000512853 KRTAP23-1A1A580 65 aa5.07□□□□□ -1.6
SNX25-205ENST00000512853 BIRC6Q9NR09 4857 aa5.04□□□□□ -1.6
SNX25-205ENST00000512853 KRTAP4-8Q9BYQ9 185 aa5.04□□□□□ -1.6
SNX25-205ENST00000512853 TNP1P09430 55 aa5.03□□□□□ -1.6
SNX25-205ENST00000512853 LUZP6Q538Z0 58 aa5.02□□□□□ -1.61
SNX25-205ENST00000512853 HERC2O95714 4834 aa5□□□□□ -1.61
SNX25-205ENST00000512853 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.97□□□□□ -1.61
SNX25-205ENST00000512853 SPRR5A0A1B0GTR4 108 aa4.95□□□□□ -1.62
SNX25-205ENST00000512853 KRTAP9-2Q9BYQ4 174 aa4.95□□□□□ -1.62
SNX25-205ENST00000512853 KRTAP9-6A0A140TA67 174 aa4.93□□□□□ -1.62
SNX25-205ENST00000512853 SPRR2GQ9BYE4 73 aa4.9□□□□□ -1.62
SNX25-205ENST00000512853 A0A0A0MQY5 61 aa4.87□□□□□ -1.63
SNX25-205ENST00000512853 KRTAP19-1Q8IUB9 90 aa4.86□□□□□ -1.63
SNX25-205ENST00000512853 PCLOQ9Y6V0 5065 aa4.81□□□□□ -1.64
SNX25-205ENST00000512853 LCE3BQ5TA77 95 aa4.8□□□□□ -1.64
SNX25-205ENST00000512853 MUC2Q02817 5179 aa4.8□□□□□ -1.64
SNX25-205ENST00000512853 HMCN2Q8NDA2 5059 aa4.8□□□□□ -1.64
SNX25-205ENST00000512853 LCE3AQ5TA76 89 aa4.75□□□□□ -1.65
SNX25-205ENST00000512853 MT1HP80294 61 aa4.73□□□□□ -1.65
SNX25-205ENST00000512853 KRTAP4-12Q9BQ66 201 aa4.73□□□□□ -1.65
SNX25-205ENST00000512853 MT2AP02795 61 aa4.71□□□□□ -1.66
SNX25-205ENST00000512853 KRTAP9-9Q9BYP9 154 aa4.71□□□□□ -1.66
SNX25-205ENST00000512853 KRTAP9-4Q9BYQ2 154 aa4.71□□□□□ -1.66
SNX25-205ENST00000512853 MT1FP04733 61 aa4.7□□□□□ -1.66
SNX25-205ENST00000512853 M0R2T5 61 aa4.69□□□□□ -1.66
SNX25-205ENST00000512853 KRTAP19-8Q3LI54 63 aa4.69□□□□□ -1.66
SNX25-205ENST00000512853 KRTAP4-8A0A0G2JLE6 195 aa4.67□□□□□ -1.66
SNX25-205ENST00000512853 KRTAP8-1Q8IUC2 63 aa4.67□□□□□ -1.66
SNX25-205ENST00000512853 KRTAP10-10P60014 251 aa4.65□□□□□ -1.67
SNX25-205ENST00000512853 KRTAP9-8Q9BYQ0 159 aa4.65□□□□□ -1.67
SNX25-205ENST00000512853 FAT4Q6V0I7 4981 aa4.63□□□□□ -1.67
SNX25-205ENST00000512853 MT1BP07438 61 aa4.6□□□□□ -1.67
SNX25-205ENST00000512853 KRTAP10-5P60370 271 aa4.59□□□□□ -1.67
SNX25-205ENST00000512853 RNF213Q63HN8 5207 aa4.59□□□□□ -1.68
SNX25-205ENST00000512853 MT1XP80297 61 aa4.58□□□□□ -1.68
SNX25-205ENST00000512853 KRTAP10-12P60413 245 aa4.53□□□□□ -1.68
SNX25-205ENST00000512853 KRTAP12-3P60328 96 aa4.52□□□□□ -1.69
SNX25-205ENST00000512853 KRTAP4-7Q9BYR0 210 aa4.52□□□□□ -1.69
SNX25-205ENST00000512853 UBR4Q5T4S7 5183 aa4.52□□□□□ -1.69
SNX25-205ENST00000512853 LCE1DQ5T752 114 aa4.47□□□□□ -1.69
SNX25-205ENST00000512853 KRTAP9-3Q9BYQ3 159 aa4.46□□□□□ -1.7
SNX25-205ENST00000512853 KRTAP10-7P60409 375 aaPredicted RBP4.44□□□□□ -1.7
SNX25-205ENST00000512853 PRO2289Q9P1D8 64 aa4.44□□□□□ -1.7
SNX25-205ENST00000512853 INE1O15225 51 aa4.44□□□□□ -1.7
SNX25-205ENST00000512853 KRTAP19-4Q3LI73 84 aa4.42□□□□□ -1.7
SNX25-205ENST00000512853 KRTAP4-9Q9BYQ8 210 aa4.37□□□□□ -1.71
SNX25-205ENST00000512853 KRTAP4-2Q9BYR5 136 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms