RNA–Protein interactions for RNA: ENST00000512789.5

GYPA-209, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPA, Length 258 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-209ENST00000512789 SMIM4Q8WVI0 70 aa-0.47□□□□□ -2.48
GYPA-209ENST00000512789 CDKN2A-AS1Q9UH64 79 aa-0.47□□□□□ -2.48
GYPA-209ENST00000512789 ARL2-SNX15V9GYD0 113 aa-0.47□□□□□ -2.48
GYPA-209ENST00000512789 LOC100130705A0A1B0GUX0 176 aa-0.48□□□□□ -2.49
GYPA-209ENST00000512789 H3BUT2 72 aa-0.48□□□□□ -2.49
GYPA-209ENST00000512789 SNAPC5O75971 98 aa-0.48□□□□□ -2.49
GYPA-209ENST00000512789 HIST1H1DP16402 221 aaKnown RBP-0.48□□□□□ -2.49
GYPA-209ENST00000512789 TOMM7Q9P0U1 55 aa-0.48□□□□□ -2.49
GYPA-209ENST00000512789 MMP24-AS1A0A0U1RRL7 71 aa-0.49□□□□□ -2.49
GYPA-209ENST00000512789 S100A7L2Q5SY68 101 aa-0.49□□□□□ -2.49
GYPA-209ENST00000512789 TSC22D3Q99576 134 aa-0.49□□□□□ -2.49
GYPA-209ENST00000512789 SEC11CQ9BY50 192 aa-0.49□□□□□ -2.49
GYPA-209ENST00000512789 GNG8Q9UK08 70 aa-0.49□□□□□ -2.49
GYPA-209ENST00000512789 HCG22E2RYF7 251 aa-0.5□□□□□ -2.49
GYPA-209ENST00000512789 SSSCA1O60232 199 aa-0.5□□□□□ -2.49
GYPA-209ENST00000512789 MT-ATP8P03928 68 aa-0.5□□□□□ -2.49
GYPA-209ENST00000512789 C7orf77A4D0Y5 90 aa-0.51□□□□□ -2.49
GYPA-209ENST00000512789 H3BQF6 201 aa-0.51□□□□□ -2.49
GYPA-209ENST00000512789 I3L3M4 83 aa-0.51□□□□□ -2.49
GYPA-209ENST00000512789 NDUFC1O43677 76 aa-0.51□□□□□ -2.49
GYPA-209ENST00000512789 SIX6O95475 246 aa-0.51□□□□□ -2.49
GYPA-209ENST00000512789 C3orf79P0CE67 100 aa-0.51□□□□□ -2.49
GYPA-209ENST00000512789 RPS25P62851 125 aaKnown RBP-0.51□□□□□ -2.49
GYPA-209ENST00000512789 CATR1Q13166 79 aa-0.51□□□□□ -2.49
GYPA-209ENST00000512789 C10orf113Q5VZT2 155 aa-0.51□□□□□ -2.49
GYPA-209ENST00000512789 C12orf73Q69YU5 71 aa-0.51□□□□□ -2.49
GYPA-209ENST00000512789 TP53AIP1Q9HCN2 124 aa-0.51□□□□□ -2.49
GYPA-209ENST00000512789 A0A087WXM4 84 aa-0.52□□□□□ -2.49
GYPA-209ENST00000512789 IGIPA6NJ69 53 aa-0.52□□□□□ -2.49
GYPA-209ENST00000512789 PPP1R17O96001 155 aa-0.52□□□□□ -2.49
GYPA-209ENST00000512789 SMIM13P0DJ93 91 aa-0.52□□□□□ -2.49
GYPA-209ENST00000512789 Q6JHZ5 121 aa-0.52□□□□□ -2.49
GYPA-209ENST00000512789 RPL13AP3Q6NVV1 102 aa-0.52□□□□□ -2.49
GYPA-209ENST00000512789 COPS9Q8WXC6 57 aa-0.52□□□□□ -2.49
GYPA-209ENST00000512789 CCDC167Q9P0B6 97 aa-0.52□□□□□ -2.49
GYPA-209ENST00000512789 TRBV7-4A0A0J9YYF1 115 aa-0.53□□□□□ -2.49
GYPA-209ENST00000512789 CEBPZOSA8MTT3 80 aa-0.53□□□□□ -2.49
GYPA-209ENST00000512789 IFNGP01579 166 aa-0.53□□□□□ -2.49
GYPA-209ENST00000512789 SMCO1Q147U7 214 aa-0.53□□□□□ -2.49
GYPA-209ENST00000512789 MRPL34Q9BQ48 92 aaKnown RBP-0.53□□□□□ -2.49
GYPA-209ENST00000512789 NMES1Q9C002 83 aa-0.53□□□□□ -2.49
GYPA-209ENST00000512789 TMEM191AQ9H0A3 160 aa-0.53□□□□□ -2.49
GYPA-209ENST00000512789 ARPC5O15511 151 aa-0.54□□□□□ -2.5
GYPA-209ENST00000512789 HMGN1P05114 100 aa-0.54□□□□□ -2.5
GYPA-209ENST00000512789 PPP3R1P63098 170 aa-0.54□□□□□ -2.5
GYPA-209ENST00000512789 COX17Q14061 63 aa-0.54□□□□□ -2.5
GYPA-209ENST00000512789 S100A13Q99584 98 aa-0.54□□□□□ -2.5
GYPA-209ENST00000512789 CTXND1A0A1B0GTU2 59 aa-0.55□□□□□ -2.5
GYPA-209ENST00000512789 COX7BP24311 80 aa-0.55□□□□□ -2.5
GYPA-209ENST00000512789 C9orf62Q8N4C0 152 aa-0.55□□□□□ -2.5
GYPA-209ENST00000512789 ACBD7Q8N6N7 88 aa-0.55□□□□□ -2.5
GYPA-209ENST00000512789 SMIM2Q9BVW6 85 aa-0.55□□□□□ -2.5
GYPA-209ENST00000512789 TRAV13-2A0A0B4J235 113 aa-0.56□□□□□ -2.5
GYPA-209ENST00000512789 LINC00158P58513 81 aa-0.56□□□□□ -2.5
GYPA-209ENST00000512789 UBE2L3P68036 154 aaKnown RBP-0.56□□□□□ -2.5
GYPA-209ENST00000512789 CCDC58Q4VC31 144 aa-0.56□□□□□ -2.5
GYPA-209ENST00000512789 MUSTN1Q8IVN3 82 aa-0.56□□□□□ -2.5
GYPA-209ENST00000512789 ST20Q9HBF5 79 aa-0.56□□□□□ -2.5
GYPA-209ENST00000512789 SFT2D2O95562 160 aa-0.57□□□□□ -2.5
GYPA-209ENST00000512789 SMIM11AP58511 58 aa-0.57□□□□□ -2.5
GYPA-209ENST00000512789 ARPC4P59998 168 aa-0.57□□□□□ -2.5
GYPA-209ENST00000512789 MRPS10P82664 201 aaKnown RBP-0.57□□□□□ -2.5
GYPA-209ENST00000512789 ANP32BQ92688 251 aaKnown RBP-0.57□□□□□ -2.5
GYPA-209ENST00000512789 PFDN5Q99471 154 aa-0.57□□□□□ -2.5
GYPA-209ENST00000512789 C20orf78Q9BR46 151 aa-0.57□□□□□ -2.5
GYPA-209ENST00000512789 PDCD10Q9BUL8 212 aa-0.57□□□□□ -2.5
GYPA-209ENST00000512789 FAM107BQ9H098 131 aa-0.57□□□□□ -2.5
GYPA-209ENST00000512789 PAIP2BQ9ULR5 123 aaKnown RBP-0.57□□□□□ -2.5
GYPA-209ENST00000512789 AP4S1Q9Y587 144 aa-0.57□□□□□ -2.5
GYPA-209ENST00000512789 UBE2L5PA0A1B0GUS4 154 aa-0.58□□□□□ -2.5
GYPA-209ENST00000512789 K7EMI3 77 aa-0.58□□□□□ -2.5
GYPA-209ENST00000512789 IGLC3P0DOY3 106 aa-0.58□□□□□ -2.5
GYPA-209ENST00000512789 GNG2P59768 71 aa-0.58□□□□□ -2.5
GYPA-209ENST00000512789 PSENENQ9NZ42 101 aa-0.58□□□□□ -2.5
GYPA-209ENST00000512789 V9GYH0 126 aa-0.58□□□□□ -2.5
GYPA-209ENST00000512789 NXT2Q9NPJ8 142 aaKnown RBP-0.59□□□□□ -2.5
GYPA-209ENST00000512789 FCER1GP30273 86 aa-0.6□□□□□ -2.51
GYPA-209ENST00000512789 IFI27P40305 119 aaPredicted RBP-0.6□□□□□ -2.51
GYPA-209ENST00000512789 TMEM170BQ5T4T1 132 aa-0.6□□□□□ -2.51
GYPA-209ENST00000512789 LINC00308Q8TCZ7 52 aa-0.61□□□□□ -2.51
GYPA-209ENST00000512789 hADV29S1A0JD25 119 aa-0.62□□□□□ -2.51
GYPA-209ENST00000512789 APOC3P02656 99 aa-0.62□□□□□ -2.51
GYPA-209ENST00000512789 BAGE2Q86Y30 109 aa-0.62□□□□□ -2.51
GYPA-209ENST00000512789 C2orf88Q9BSF0 95 aa-0.62□□□□□ -2.51
GYPA-209ENST00000512789 SPANXDQ9BXN6 97 aa-0.62□□□□□ -2.51
GYPA-209ENST00000512789 CACFD1Q9UGQ2 172 aa-0.62□□□□□ -2.51
GYPA-209ENST00000512789 EFCAB10A6NFE3 127 aa-0.63□□□□□ -2.51
GYPA-209ENST00000512789 ACYP1P07311 99 aa-0.63□□□□□ -2.51
GYPA-209ENST00000512789 MEIG1Q5JSS6 88 aa-0.63□□□□□ -2.51
GYPA-209ENST00000512789 SEC11AP67812 179 aa-0.64□□□□□ -2.51
GYPA-209ENST00000512789 Q8N8P6 123 aa-0.64□□□□□ -2.51
GYPA-209ENST00000512789 SNHG12Q9BXW3 62 aa-0.64□□□□□ -2.51
GYPA-209ENST00000512789 HIGD1BQ9P298 99 aa-0.64□□□□□ -2.51
GYPA-209ENST00000512789 A0A1B0GUT8 65 aa-0.65□□□□□ -2.51
GYPA-209ENST00000512789 UQCR11O14957 56 aa-0.65□□□□□ -2.51
GYPA-209ENST00000512789 S100A12P80511 92 aa-0.65□□□□□ -2.51
GYPA-209ENST00000512789 H7BZZ5 65 aa-0.66□□□□□ -2.52
GYPA-209ENST00000512789 NDUFB1O75438 58 aa-0.66□□□□□ -2.52
GYPA-209ENST00000512789 SFTA2Q6UW10 78 aa-0.66□□□□□ -2.52
GYPA-209ENST00000512789 DEFB107AQ8IZN7 70 aa-0.66□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms