RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 Q5W150 140 aa3.31□□□□□ -1.88
USP46-208ENST00000512656 CASC2Q6XLA1 102 aa3.31□□□□□ -1.88
USP46-208ENST00000512656 FAM236AA0A1B0GUQ0 79 aa3.3□□□□□ -1.88
USP46-208ENST00000512656 FAM236BA0A1B0GV22 79 aa3.3□□□□□ -1.88
USP46-208ENST00000512656 HCG22E2RYF7 251 aa3.3□□□□□ -1.88
USP46-208ENST00000512656 TSTD3H0UI37 97 aa3.3□□□□□ -1.88
USP46-208ENST00000512656 C4orf26Q17RF5 130 aa3.3□□□□□ -1.88
USP46-208ENST00000512656 BATFQ16520 125 aa3.29□□□□□ -1.88
USP46-208ENST00000512656 SMIM6P0DI80 62 aa3.28□□□□□ -1.88
USP46-208ENST00000512656 C5orf47Q569G3 176 aa3.28□□□□□ -1.88
USP46-208ENST00000512656 A0A1W2PPM0 123 aa3.27□□□□□ -1.89
USP46-208ENST00000512656 A6NN06 94 aa3.27□□□□□ -1.89
USP46-208ENST00000512656 CSAG1Q6PB30 78 aa3.27□□□□□ -1.89
USP46-208ENST00000512656 Q8N9L7 120 aa3.27□□□□□ -1.89
USP46-208ENST00000512656 S4R3F8 94 aa3.27□□□□□ -1.89
USP46-208ENST00000512656 Q5VV11 94 aa3.26□□□□□ -1.89
USP46-208ENST00000512656 NDUFAF8A1L188 74 aa3.25□□□□□ -1.89
USP46-208ENST00000512656 UBL5Q9BZL1 73 aa3.25□□□□□ -1.89
USP46-208ENST00000512656 NEBP20929 6669 aa3.24□□□□□ -1.89
USP46-208ENST00000512656 C1orf64Q8NEQ6 169 aa3.24□□□□□ -1.89
USP46-208ENST00000512656 TAX1BP3O14907 124 aa3.23□□□□□ -1.89
USP46-208ENST00000512656 SPRR2GQ9BYE4 73 aa3.23□□□□□ -1.89
USP46-208ENST00000512656 MT1BP07438 61 aa3.22□□□□□ -1.89
USP46-208ENST00000512656 KRTAP19-8Q3LI54 63 aa3.22□□□□□ -1.89
USP46-208ENST00000512656 LCA10Q71F78 164 aa3.22□□□□□ -1.89
USP46-208ENST00000512656 TP53AIP1Q9HCN2 124 aa3.22□□□□□ -1.89
USP46-208ENST00000512656 OBSCNQ5VST9 7968 aa3.21□□□□□ -1.9
USP46-208ENST00000512656 SPCS1Q9Y6A9 102 aa3.21□□□□□ -1.9
USP46-208ENST00000512656 KLKP1Q107X0 134 aa3.2□□□□□ -1.9
USP46-208ENST00000512656 MUC12Q9UKN1 5478 aa3.2□□□□□ -1.9
USP46-208ENST00000512656 CRIPTQ9P021 101 aa3.19□□□□□ -1.9
USP46-208ENST00000512656 IMUPQ9GZP8 106 aa3.17□□□□□ -1.9
USP46-208ENST00000512656 MDN1Q9NU22 5596 aa3.17□□□□□ -1.9
USP46-208ENST00000512656 KRTAP4-3Q9BYR4 195 aa3.16□□□□□ -1.9
USP46-208ENST00000512656 KMT2DO14686 5537 aa3.15□□□□□ -1.9
USP46-208ENST00000512656 KRTAP20-1Q3LI63 56 aa3.15□□□□□ -1.91
USP46-208ENST00000512656 CYP4F30PQ9H0H9 118 aa3.14□□□□□ -1.91
USP46-208ENST00000512656 PRO0461Q9UI25 63 aa3.14□□□□□ -1.91
USP46-208ENST00000512656 LOC101927531A0A1B0GV80 90 aa3.13□□□□□ -1.91
USP46-208ENST00000512656 K7EP34 96 aa3.13□□□□□ -1.91
USP46-208ENST00000512656 COL5A1-AS1Q5SY13 56 aa3.13□□□□□ -1.91
USP46-208ENST00000512656 TRAV22A0A0B4J277 110 aa3.11□□□□□ -1.91
USP46-208ENST00000512656 NDUFC1O43677 76 aa3.11□□□□□ -1.91
USP46-208ENST00000512656 H0YAA0 97 aa3.1□□□□□ -1.91
USP46-208ENST00000512656 LCE3EQ5T5B0 92 aa3.1□□□□□ -1.91
USP46-208ENST00000512656 LCE3AQ5TA76 89 aa3.1□□□□□ -1.91
USP46-208ENST00000512656 GTF2H5Q6ZYL4 71 aa3.1□□□□□ -1.91
USP46-208ENST00000512656 F8W1H4 67 aa3.09□□□□□ -1.91
USP46-208ENST00000512656 PRO2289Q9P1D8 64 aa3.09□□□□□ -1.91
USP46-208ENST00000512656 A0A087WVE0 104 aa3.08□□□□□ -1.92
USP46-208ENST00000512656 LOC105371267A0A1B0GV96 52 aa3.08□□□□□ -1.92
USP46-208ENST00000512656 ATOX1O00244 68 aa3.08□□□□□ -1.92
USP46-208ENST00000512656 ACYP1P07311 99 aa3.07□□□□□ -1.92
USP46-208ENST00000512656 ETDBQ3ZM63 59 aa3.07□□□□□ -1.92
USP46-208ENST00000512656 A8MUN3 132 aa3.06□□□□□ -1.92
USP46-208ENST00000512656 UQCRQO14949 82 aa3.06□□□□□ -1.92
USP46-208ENST00000512656 KRTAP12-2P59991 146 aa3.06□□□□□ -1.92
USP46-208ENST00000512656 H0Y9P7 68 aa3.05□□□□□ -1.92
USP46-208ENST00000512656 KRTAP2-3P0C7H8 128 aa3.05□□□□□ -1.92
USP46-208ENST00000512656 ADM2Q7Z4H4 148 aa3.05□□□□□ -1.92
USP46-208ENST00000512656 KRTAP2-4Q9BYR9 128 aa3.05□□□□□ -1.92
USP46-208ENST00000512656 A8MU10 97 aa3.04□□□□□ -1.92
USP46-208ENST00000512656 ATP5EP2Q5VTU8 51 aa3.04□□□□□ -1.92
USP46-208ENST00000512656 PLAC4Q8WY50 150 aa3.04□□□□□ -1.92
USP46-208ENST00000512656 SPRR2FQ96RM1 72 aa3.04□□□□□ -1.92
USP46-208ENST00000512656 HIST1H4AP62805 103 aaKnown RBP3.03□□□□□ -1.92
USP46-208ENST00000512656 PRAC1Q96KF2 57 aa3.03□□□□□ -1.92
USP46-208ENST00000512656 C20orf197Q8N268 126 aa3.02□□□□□ -1.93
USP46-208ENST00000512656 FAM240AA0A1B0GVK7 77 aa3.01□□□□□ -1.93
USP46-208ENST00000512656 SPRR2EP22531 72 aa3.01□□□□□ -1.93
USP46-208ENST00000512656 SPRR2BP35325 72 aa3.01□□□□□ -1.93
USP46-208ENST00000512656 SPRR2AP35326 72 aa3.01□□□□□ -1.93
USP46-208ENST00000512656 MT1XP80297 61 aa3□□□□□ -1.93
USP46-208ENST00000512656 KRTAP8-1Q8IUC2 63 aa3□□□□□ -1.93
USP46-208ENST00000512656 R4GN34 69 aa3□□□□□ -1.93
USP46-208ENST00000512656 MP68P56378 58 aa2.99□□□□□ -1.93
USP46-208ENST00000512656 LINC00208Q96KT6 92 aa2.99□□□□□ -1.93
USP46-208ENST00000512656 M0QZ58 72 aa2.96□□□□□ -1.94
USP46-208ENST00000512656 LINC00643Q86TS7 51 aa2.95□□□□□ -1.94
USP46-208ENST00000512656 PCP4L1A6NKN8 68 aa2.94□□□□□ -1.94
USP46-208ENST00000512656 P0C880 135 aa2.94□□□□□ -1.94
USP46-208ENST00000512656 KRTAP2-1Q9BYU5 128 aa2.94□□□□□ -1.94
USP46-208ENST00000512656 H3BPC8 53 aa2.93□□□□□ -1.94
USP46-208ENST00000512656 KRTAP5-2Q701N4 177 aa2.93□□□□□ -1.94
USP46-208ENST00000512656 OCR1Q9BZK8 76 aa2.93□□□□□ -1.94
USP46-208ENST00000512656 SPRR2DP22532 72 aa2.92□□□□□ -1.94
USP46-208ENST00000512656 LINC01554Q52M75 96 aa2.92□□□□□ -1.94
USP46-208ENST00000512656 DMAC1Q96GE9 116 aa2.91□□□□□ -1.94
USP46-208ENST00000512656 SCGB1A1P11684 91 aa2.88□□□□□ -1.95
USP46-208ENST00000512656 KRTAP5-5Q701N2 237 aaPredicted RBP2.88□□□□□ -1.95
USP46-208ENST00000512656 TRAV7A0A075B6U4 112 aa2.87□□□□□ -1.95
USP46-208ENST00000512656 MT-ATP8P03928 68 aa2.87□□□□□ -1.95
USP46-208ENST00000512656 SPTSSBQ8NFR3 76 aa2.86□□□□□ -1.95
USP46-208ENST00000512656 ACYP2P14621 99 aa2.84□□□□□ -1.95
USP46-208ENST00000512656 J3QR89 54 aa2.83□□□□□ -1.96
USP46-208ENST00000512656 CHKB-CPT1BH3BT56 60 aa2.8□□□□□ -1.96
USP46-208ENST00000512656 SMIM20Q8N5G0 67 aa2.78□□□□□ -1.96
USP46-208ENST00000512656 A0A1B0GV90 55 aa2.75□□□□□ -1.97
USP46-208ENST00000512656 LCE1CQ5T751 118 aa2.75□□□□□ -1.97
USP46-208ENST00000512656 LCE1BQ5T7P3 118 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms