RNA–Protein interactions for RNA: ENST00000512064.5

GYPA-208, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPA, Length 441 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-208ENST00000512064 VCANP13611 3396 aa1.46□□□□□ -2.18
GYPA-208ENST00000512064 EPG5Q9HCE0 2579 aa1.46□□□□□ -2.18
GYPA-208ENST00000512064 HRNRQ86YZ3 2850 aaPredicted RBP1.45□□□□□ -2.18
GYPA-208ENST00000512064 KRTAP12-4P60329 112 aa1.45□□□□□ -2.18
GYPA-208ENST00000512064 FASNP49327 2511 aaKnown RBP1.45□□□□□ -2.18
GYPA-208ENST00000512064 LAMA3Q16787 3333 aa1.44□□□□□ -2.18
GYPA-208ENST00000512064 USP9YO00507 2555 aaPredicted RBP1.44□□□□□ -2.18
GYPA-208ENST00000512064 CEP295Q9C0D2 2601 aa1.44□□□□□ -2.18
GYPA-208ENST00000512064 POLQO75417 2590 aa1.44□□□□□ -2.18
GYPA-208ENST00000512064 WDFY3Q8IZQ1 3526 aa1.43□□□□□ -2.18
GYPA-208ENST00000512064 CSMD1Q96PZ7 3565 aa1.43□□□□□ -2.18
GYPA-208ENST00000512064 STAB2Q8WWQ8 2551 aa1.42□□□□□ -2.18
GYPA-208ENST00000512064 LOC400499M0QZD8 3231 aa1.41□□□□□ -2.18
GYPA-208ENST00000512064 KRTAP10-4P60372 401 aaPredicted RBP1.41□□□□□ -2.18
GYPA-208ENST00000512064 BDP1A6H8Y1 2624 aa1.41□□□□□ -2.18
GYPA-208ENST00000512064 NBEAL1Q6ZS30 2694 aa1.41□□□□□ -2.18
GYPA-208ENST00000512064 NOTCH1P46531 2555 aa1.4□□□□□ -2.19
GYPA-208ENST00000512064 MYO18BQ8IUG5 2567 aa1.4□□□□□ -2.19
GYPA-208ENST00000512064 SPENQ96T58 3664 aaKnown RBP1.39□□□□□ -2.19
GYPA-208ENST00000512064 NBPF19A0A087WUL8 3843 aa1.39□□□□□ -2.19
GYPA-208ENST00000512064 ITPR2Q14571 2701 aa1.38□□□□□ -2.19
GYPA-208ENST00000512064 DNAH11Q96DT5 4516 aa1.37□□□□□ -2.19
GYPA-208ENST00000512064 CMYA5Q8N3K9 4069 aa1.37□□□□□ -2.19
GYPA-208ENST00000512064 SMR3BP02814 79 aaPredicted RBP1.37□□□□□ -2.19
GYPA-208ENST00000512064 KRTAP6-3Q3LI67 103 aa1.37□□□□□ -2.19
GYPA-208ENST00000512064 SPRR2GQ9BYE4 73 aa1.37□□□□□ -2.19
GYPA-208ENST00000512064 MXRA5Q9NR99 2828 aa1.37□□□□□ -2.19
GYPA-208ENST00000512064 MYCBP2O75592 4640 aa1.37□□□□□ -2.19
GYPA-208ENST00000512064 ZNF292O60281 2723 aa1.37□□□□□ -2.19
GYPA-208ENST00000512064 HIVEP1P15822 2718 aa1.37□□□□□ -2.19
GYPA-208ENST00000512064 FRAS1Q86XX4 4008 aa1.37□□□□□ -2.19
GYPA-208ENST00000512064 DNAH1Q9P2D7 4330 aa1.36□□□□□ -2.19
GYPA-208ENST00000512064 LAMA5O15230 3695 aa1.36□□□□□ -2.19
GYPA-208ENST00000512064 MUC19Q7Z5P9 8384 aa1.36□□□□□ -2.19
GYPA-208ENST00000512064 CDH23Q9H251 3354 aa1.36□□□□□ -2.19
GYPA-208ENST00000512064 DNAH8Q96JB1 4490 aa1.36□□□□□ -2.19
GYPA-208ENST00000512064 ATRQ13535 2644 aa1.36□□□□□ -2.19
GYPA-208ENST00000512064 ANKRD11Q6UB99 2663 aaPredicted RBP1.35□□□□□ -2.19
GYPA-208ENST00000512064 BRCA2P51587 3418 aa1.35□□□□□ -2.19
GYPA-208ENST00000512064 TEP1Q99973 2627 aaKnown RBP1.34□□□□□ -2.19
GYPA-208ENST00000512064 FLNCQ14315 2725 aa1.34□□□□□ -2.2
GYPA-208ENST00000512064 FBN3Q75N90 2809 aa1.34□□□□□ -2.2
GYPA-208ENST00000512064 SMG1Q96Q15 3661 aaKnown RBP1.34□□□□□ -2.2
GYPA-208ENST00000512064 PKD1L1Q8TDX9 2849 aa1.33□□□□□ -2.2
GYPA-208ENST00000512064 ACACBO00763 2458 aa1.32□□□□□ -2.2
GYPA-208ENST00000512064 LYSTQ99698 3801 aa1.32□□□□□ -2.2
GYPA-208ENST00000512064 HUWE1Q7Z6Z7 4374 aaKnown RBP1.32□□□□□ -2.2
GYPA-208ENST00000512064 TRRAPQ9Y4A5 3859 aa1.32□□□□□ -2.2
GYPA-208ENST00000512064 DNAH9Q9NYC9 4486 aa1.32□□□□□ -2.2
GYPA-208ENST00000512064 BSNQ9UPA5 3926 aa1.32□□□□□ -2.2
GYPA-208ENST00000512064 ZANQ9Y493 2812 aa1.32□□□□□ -2.2
GYPA-208ENST00000512064 SACSQ9NZJ4 4579 aa1.32□□□□□ -2.2
GYPA-208ENST00000512064 HMCN1Q96RW7 5635 aa1.3□□□□□ -2.2
GYPA-208ENST00000512064 DNAH10Q8IVF4 4471 aa1.3□□□□□ -2.2
GYPA-208ENST00000512064 RELNP78509 3460 aa1.3□□□□□ -2.2
GYPA-208ENST00000512064 ANK3Q12955 4377 aaKnown RBP1.29□□□□□ -2.2
GYPA-208ENST00000512064 ANK2Q01484 3957 aa1.29□□□□□ -2.2
GYPA-208ENST00000512064 DNAH2Q9P225 4427 aa1.29□□□□□ -2.2
GYPA-208ENST00000512064 MT1AP04731 61 aa1.29□□□□□ -2.2
GYPA-208ENST00000512064 KRTAP5-7Q6L8G8 165 aa1.29□□□□□ -2.2
GYPA-208ENST00000512064 DYNC2H1Q8NCM8 4307 aaKnown RBP1.29□□□□□ -2.2
GYPA-208ENST00000512064 MYO15AQ9UKN7 3530 aa1.29□□□□□ -2.2
GYPA-208ENST00000512064 NSD1Q96L73 2696 aaPredicted RBP1.29□□□□□ -2.2
GYPA-208ENST00000512064 EYSQ5T1H1 3165 aa1.29□□□□□ -2.2
GYPA-208ENST00000512064 ASPMQ8IZT6 3477 aa1.28□□□□□ -2.2
GYPA-208ENST00000512064 MGAM2Q2M2H8 2515 aa1.28□□□□□ -2.2
GYPA-208ENST00000512064 STAB1Q9NY15 2570 aa1.28□□□□□ -2.2
GYPA-208ENST00000512064 DNAH6Q9C0G6 4158 aa1.28□□□□□ -2.21
GYPA-208ENST00000512064 DNAH17Q9UFH2 4485 aa1.27□□□□□ -2.21
GYPA-208ENST00000512064 SVEP1Q4LDE5 3571 aa1.27□□□□□ -2.21
GYPA-208ENST00000512064 DNAH3Q8TD57 4116 aa1.27□□□□□ -2.21
GYPA-208ENST00000512064 MAST4O15021 2626 aa1.27□□□□□ -2.21
GYPA-208ENST00000512064 CSMD3Q7Z407 3707 aa1.26□□□□□ -2.21
GYPA-208ENST00000512064 FLNAP21333 2647 aaKnown RBP1.26□□□□□ -2.21
GYPA-208ENST00000512064 FBN2P35556 2912 aa1.26□□□□□ -2.21
GYPA-208ENST00000512064 IGSF10Q6WRI0 2623 aa1.25□□□□□ -2.21
GYPA-208ENST00000512064 KRTAP19-5Q3LI72 72 aa1.25□□□□□ -2.21
GYPA-208ENST00000512064 PKD1P98161 4303 aa1.24□□□□□ -2.21
GYPA-208ENST00000512064 CSMD2Q7Z408 3487 aa1.24□□□□□ -2.21
GYPA-208ENST00000512064 PRKDCP78527 4128 aaKnown RBP1.24□□□□□ -2.21
GYPA-208ENST00000512064 MUC3AQ02505 3323 aa1.23□□□□□ -2.21
GYPA-208ENST00000512064 MT1EP04732 61 aa1.23□□□□□ -2.21
GYPA-208ENST00000512064 KRTAP19-8Q3LI54 63 aa1.23□□□□□ -2.21
GYPA-208ENST00000512064 HECTD4Q9Y4D8 3996 aa1.22□□□□□ -2.21
GYPA-208ENST00000512064 HSPG2P98160 4391 aa1.22□□□□□ -2.21
GYPA-208ENST00000512064 FLGP20930 4061 aaPredicted RBP1.22□□□□□ -2.21
GYPA-208ENST00000512064 TENM3Q9P273 2699 aa1.22□□□□□ -2.21
GYPA-208ENST00000512064 VPS13CQ709C8 3753 aa1.21□□□□□ -2.22
GYPA-208ENST00000512064 PRM1P04553 51 aa1.2□□□□□ -2.22
GYPA-208ENST00000512064 MT1LQ93083 61 aa1.2□□□□□ -2.22
GYPA-208ENST00000512064 CUBNO60494 3623 aa1.2□□□□□ -2.22
GYPA-208ENST00000512064 APOBP04114 4563 aaKnown RBP1.2□□□□□ -2.22
GYPA-208ENST00000512064 KMT2AQ03164 3969 aa1.19□□□□□ -2.22
GYPA-208ENST00000512064 KRTAP21-2Q3LI59 83 aa1.19□□□□□ -2.22
GYPA-208ENST00000512064 TENM1Q9UKZ4 2725 aa1.18□□□□□ -2.22
GYPA-208ENST00000512064 DNAH7Q8WXX0 4024 aa1.18□□□□□ -2.22
GYPA-208ENST00000512064 SPRR2AP35326 72 aa1.17□□□□□ -2.22
GYPA-208ENST00000512064 LRP1Q07954 4544 aaKnown RBP1.17□□□□□ -2.22
GYPA-208ENST00000512064 VPS13BQ7Z7G8 4022 aa1.17□□□□□ -2.22
GYPA-208ENST00000512064 ZNF469Q96JG9 3925 aaPredicted RBP1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms