RNA–Protein interactions for RNA: ENST00000512049.5

SH3TC2-211, Transcript of SH3 domain and tetratricopeptide repeats 2, humanhuman

TSL 1 (best) BASIC

Gene SH3TC2, Length 4,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2-211ENST00000512049 DNAH7Q8WXX0 4024 aa5.61□□□□□ -1.51
SH3TC2-211ENST00000512049 VPS13DQ5THJ4 4388 aa5.61□□□□□ -1.51
SH3TC2-211ENST00000512049 KRTAP12-1P59990 96 aa5.6□□□□□ -1.51
SH3TC2-211ENST00000512049 DNAH17Q9UFH2 4485 aa5.59□□□□□ -1.51
SH3TC2-211ENST00000512049 MYCBP2O75592 4640 aa5.59□□□□□ -1.51
SH3TC2-211ENST00000512049 KRTAP3-3Q9BYR6 98 aa5.57□□□□□ -1.52
SH3TC2-211ENST00000512049 PLAC4Q8WY50 150 aa5.56□□□□□ -1.52
SH3TC2-211ENST00000512049 KRTAP10-4P60372 401 aaPredicted RBP5.55□□□□□ -1.52
SH3TC2-211ENST00000512049 DNAH2Q9P225 4427 aa5.55□□□□□ -1.52
SH3TC2-211ENST00000512049 CMYA5Q8N3K9 4069 aa5.54□□□□□ -1.52
SH3TC2-211ENST00000512049 KRTAP3-2Q9BYR7 98 aa5.53□□□□□ -1.52
SH3TC2-211ENST00000512049 DNAH6Q9C0G6 4158 aa5.52□□□□□ -1.53
SH3TC2-211ENST00000512049 TNP1P09430 55 aa5.5□□□□□ -1.53
SH3TC2-211ENST00000512049 VPS13BQ7Z7G8 4022 aa5.48□□□□□ -1.53
SH3TC2-211ENST00000512049 DYNC1H1Q14204 4646 aaKnown RBP5.47□□□□□ -1.53
SH3TC2-211ENST00000512049 MT1HL1P0DM35 61 aa5.44□□□□□ -1.54
SH3TC2-211ENST00000512049 DNAH3Q8TD57 4116 aa5.44□□□□□ -1.54
SH3TC2-211ENST00000512049 FAT3Q8TDW7 4589 aa5.4□□□□□ -1.55
SH3TC2-211ENST00000512049 HECTD4Q9Y4D8 3996 aa5.39□□□□□ -1.55
SH3TC2-211ENST00000512049 LRP1Q07954 4544 aaKnown RBP5.37□□□□□ -1.55
SH3TC2-211ENST00000512049 KRTAP4-5Q9BYR2 181 aa5.36□□□□□ -1.55
SH3TC2-211ENST00000512049 PP632Q6XCG6 107 aa5.35□□□□□ -1.55
SH3TC2-211ENST00000512049 SACSQ9NZJ4 4579 aa5.35□□□□□ -1.55
SH3TC2-211ENST00000512049 RYR1P21817 5038 aa5.35□□□□□ -1.55
SH3TC2-211ENST00000512049 HYDINQ4G0P3 5121 aa5.34□□□□□ -1.55
SH3TC2-211ENST00000512049 DYNC2H1Q8NCM8 4307 aaKnown RBP5.34□□□□□ -1.55
SH3TC2-211ENST00000512049 KIAA1109Q2LD37 5005 aa5.34□□□□□ -1.56
SH3TC2-211ENST00000512049 PKHD1P08F94 4074 aa5.31□□□□□ -1.56
SH3TC2-211ENST00000512049 APOBP04114 4563 aaKnown RBP5.29□□□□□ -1.56
SH3TC2-211ENST00000512049 KRTAP10-10P60014 251 aa5.29□□□□□ -1.56
SH3TC2-211ENST00000512049 LORP23490 312 aaPredicted RBP5.27□□□□□ -1.57
SH3TC2-211ENST00000512049 KRTAP15-1Q3LI76 137 aa5.26□□□□□ -1.57
SH3TC2-211ENST00000512049 ALMS1Q8TCU4 4167 aa5.24□□□□□ -1.57
SH3TC2-211ENST00000512049 FAT2Q9NYQ8 4349 aa5.2□□□□□ -1.58
SH3TC2-211ENST00000512049 RYR3Q15413 4870 aa5.18□□□□□ -1.58
SH3TC2-211ENST00000512049 LRP2P98164 4655 aa5.14□□□□□ -1.59
SH3TC2-211ENST00000512049 KRTAP17-1Q9BYP8 105 aa5.08□□□□□ -1.6
SH3TC2-211ENST00000512049 KRTAP4-1Q9BYQ7 146 aa5.07□□□□□ -1.6
SH3TC2-211ENST00000512049 KMT2CQ8NEZ4 4911 aaKnown RBP5.06□□□□□ -1.6
SH3TC2-211ENST00000512049 PKD1P98161 4303 aa4.97□□□□□ -1.61
SH3TC2-211ENST00000512049 RYR2Q92736 4967 aa4.97□□□□□ -1.61
SH3TC2-211ENST00000512049 HSPG2P98160 4391 aa4.96□□□□□ -1.62
SH3TC2-211ENST00000512049 LPAP08519 4548 aa4.93□□□□□ -1.62
SH3TC2-211ENST00000512049 PRO2289Q9P1D8 64 aa4.88□□□□□ -1.63
SH3TC2-211ENST00000512049 HERC2O95714 4834 aa4.84□□□□□ -1.63
SH3TC2-211ENST00000512049 LCE3AQ5TA76 89 aa4.83□□□□□ -1.64
SH3TC2-211ENST00000512049 EPPK1P58107 5090 aaKnown RBP4.82□□□□□ -1.64
SH3TC2-211ENST00000512049 PKHD1L1Q86WI1 4243 aa4.76□□□□□ -1.65
SH3TC2-211ENST00000512049 KRTAP10-12P60413 245 aa4.75□□□□□ -1.65
SH3TC2-211ENST00000512049 MUC2Q02817 5179 aa4.72□□□□□ -1.65
SH3TC2-211ENST00000512049 KRTAP12-3P60328 96 aa4.7□□□□□ -1.66
SH3TC2-211ENST00000512049 TNXBP22105 4242 aa4.68□□□□□ -1.66
SH3TC2-211ENST00000512049 ABCA13Q86UQ4 5058 aa4.68□□□□□ -1.66
SH3TC2-211ENST00000512049 MT1HP80294 61 aa4.62□□□□□ -1.67
SH3TC2-211ENST00000512049 KRTAP23-1A1A580 65 aa4.6□□□□□ -1.67
SH3TC2-211ENST00000512049 MT2AP02795 61 aa4.6□□□□□ -1.67
SH3TC2-211ENST00000512049 MT1FP04733 61 aa4.6□□□□□ -1.67
SH3TC2-211ENST00000512049 PCLOQ9Y6V0 5065 aa4.59□□□□□ -1.68
SH3TC2-211ENST00000512049 SPRR2GQ9BYE4 73 aa4.58□□□□□ -1.68
SH3TC2-211ENST00000512049 FAT4Q6V0I7 4981 aa4.56□□□□□ -1.68
SH3TC2-211ENST00000512049 RNF213Q63HN8 5207 aa4.54□□□□□ -1.68
SH3TC2-211ENST00000512049 KRTAP19-1Q8IUB9 90 aa4.54□□□□□ -1.68
SH3TC2-211ENST00000512049 CRCT1Q9UGL9 99 aa4.51□□□□□ -1.69
SH3TC2-211ENST00000512049 HERC1Q15751 4861 aa4.49□□□□□ -1.69
SH3TC2-211ENST00000512049 INE1O15225 51 aa4.45□□□□□ -1.7
SH3TC2-211ENST00000512049 UBR4Q5T4S7 5183 aa4.44□□□□□ -1.7
SH3TC2-211ENST00000512049 MUC17Q685J3 4493 aa4.44□□□□□ -1.7
SH3TC2-211ENST00000512049 KRTAP19-2Q3LHN2 52 aa4.43□□□□□ -1.7
SH3TC2-211ENST00000512049 FSIP2Q5CZC0 6907 aa4.4□□□□□ -1.71
SH3TC2-211ENST00000512049 LCE2CQ5TA81 110 aa4.39□□□□□ -1.71
SH3TC2-211ENST00000512049 KRTAP8-1Q8IUC2 63 aa4.39□□□□□ -1.71
SH3TC2-211ENST00000512049 KRTAP10-7P60409 375 aaPredicted RBP4.38□□□□□ -1.71
SH3TC2-211ENST00000512049 BIRC6Q9NR09 4857 aa4.37□□□□□ -1.71
SH3TC2-211ENST00000512049 FLGP20930 4061 aaPredicted RBP4.34□□□□□ -1.71
SH3TC2-211ENST00000512049 KRTAP19-5Q3LI72 72 aa4.34□□□□□ -1.71
SH3TC2-211ENST00000512049 MT1XP80297 61 aa4.32□□□□□ -1.72
SH3TC2-211ENST00000512049 KRTAP9-8Q9BYQ0 159 aa4.32□□□□□ -1.72
SH3TC2-211ENST00000512049 MT1BP07438 61 aa4.3□□□□□ -1.72
SH3TC2-211ENST00000512049 KRTAP10-5P60370 271 aa4.3□□□□□ -1.72
SH3TC2-211ENST00000512049 HMCN2Q8NDA2 5059 aa4.27□□□□□ -1.73
SH3TC2-211ENST00000512049 KRTAP19-8Q3LI54 63 aa4.26□□□□□ -1.73
SH3TC2-211ENST00000512049 SPRR5A0A1B0GTR4 108 aa4.26□□□□□ -1.73
SH3TC2-211ENST00000512049 KRTAP4-8A0A0G2JLE6 195 aa4.23□□□□□ -1.73
SH3TC2-211ENST00000512049 KRTAP4-8Q9BYQ9 185 aa4.23□□□□□ -1.73
SH3TC2-211ENST00000512049 LCE3CQ5T5A8 94 aa4.21□□□□□ -1.73
SH3TC2-211ENST00000512049 OBSCNQ5VST9 7968 aa4.19□□□□□ -1.74
SH3TC2-211ENST00000512049 KRTAP9-3Q9BYQ3 159 aa4.13□□□□□ -1.75
SH3TC2-211ENST00000512049 USH2AO75445 5202 aa4.1□□□□□ -1.75
SH3TC2-211ENST00000512049 KRTAP4-7Q9BYR0 210 aa4.09□□□□□ -1.75
SH3TC2-211ENST00000512049 SYNE1Q8NF91 8797 aaKnown RBP4.09□□□□□ -1.76
SH3TC2-211ENST00000512049 LCE2BO14633 110 aa4.05□□□□□ -1.76
SH3TC2-211ENST00000512049 KMT2DO14686 5537 aa4.03□□□□□ -1.76
SH3TC2-211ENST00000512049 DSTQ03001 7570 aaKnown RBP3.98□□□□□ -1.77
SH3TC2-211ENST00000512049 SPRR2FQ96RM1 72 aa3.95□□□□□ -1.78
SH3TC2-211ENST00000512049 FCGBPQ9Y6R7 5405 aaPredicted RBP3.94□□□□□ -1.78
SH3TC2-211ENST00000512049 MT1GP13640 62 aa3.93□□□□□ -1.78
SH3TC2-211ENST00000512049 LCE3BQ5TA77 95 aa3.83□□□□□ -1.8
SH3TC2-211ENST00000512049 KRTAP12-4P60329 112 aa3.81□□□□□ -1.8
SH3TC2-211ENST00000512049 MT1LQ93083 61 aa3.81□□□□□ -1.8
SH3TC2-211ENST00000512049 LOC100996750A0A140TA64 210 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms