RNA–Protein interactions for RNA: ENST00000511816.1

CALCOCO2-220, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 562 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-220ENST00000511816 ACACBO00763 2458 aa0.58□□□□□ -2.32
CALCOCO2-220ENST00000511816 NBPF19A0A087WUL8 3843 aa0.58□□□□□ -2.32
CALCOCO2-220ENST00000511816 MGAQ8IWI9 3026 aa0.57□□□□□ -2.32
CALCOCO2-220ENST00000511816 SPRR2AP35326 72 aa0.57□□□□□ -2.32
CALCOCO2-220ENST00000511816 WDR87Q6ZQQ6 2873 aa0.56□□□□□ -2.32
CALCOCO2-220ENST00000511816 A0A096LNI7 61 aa0.56□□□□□ -2.32
CALCOCO2-220ENST00000511816 KRTAP6-2Q3LI66 62 aa0.56□□□□□ -2.32
CALCOCO2-220ENST00000511816 TRIOO75962 3097 aa0.56□□□□□ -2.32
CALCOCO2-220ENST00000511816 ZFHX4Q86UP3 3567 aa0.56□□□□□ -2.32
CALCOCO2-220ENST00000511816 ZANQ9Y493 2812 aa0.56□□□□□ -2.32
CALCOCO2-220ENST00000511816 DNAH9Q9NYC9 4486 aa0.55□□□□□ -2.32
CALCOCO2-220ENST00000511816 MT1AP04731 61 aa0.55□□□□□ -2.32
CALCOCO2-220ENST00000511816 TEP1Q99973 2627 aaKnown RBP0.55□□□□□ -2.32
CALCOCO2-220ENST00000511816 DNAH6Q9C0G6 4158 aa0.55□□□□□ -2.32
CALCOCO2-220ENST00000511816 FLGP20930 4061 aaPredicted RBP0.54□□□□□ -2.32
CALCOCO2-220ENST00000511816 DNAH7Q8WXX0 4024 aa0.54□□□□□ -2.32
CALCOCO2-220ENST00000511816 SPG11Q96JI7 2443 aa0.54□□□□□ -2.32
CALCOCO2-220ENST00000511816 IGSF10Q6WRI0 2623 aa0.54□□□□□ -2.32
CALCOCO2-220ENST00000511816 FASNP49327 2511 aaKnown RBP0.54□□□□□ -2.32
CALCOCO2-220ENST00000511816 CFAP54Q96N23 3096 aa0.53□□□□□ -2.32
CALCOCO2-220ENST00000511816 TGP01266 2768 aa0.53□□□□□ -2.32
CALCOCO2-220ENST00000511816 ITPR1Q14643 2758 aa0.53□□□□□ -2.32
CALCOCO2-220ENST00000511816 APOBP04114 4563 aaKnown RBP0.52□□□□□ -2.33
CALCOCO2-220ENST00000511816 COL6A3P12111 3177 aa0.52□□□□□ -2.33
CALCOCO2-220ENST00000511816 LAMA5O15230 3695 aa0.52□□□□□ -2.33
CALCOCO2-220ENST00000511816 MXRA5Q9NR99 2828 aa0.52□□□□□ -2.33
CALCOCO2-220ENST00000511816 PKHD1P08F94 4074 aa0.52□□□□□ -2.33
CALCOCO2-220ENST00000511816 TLN2Q9Y4G6 2542 aa0.52□□□□□ -2.33
CALCOCO2-220ENST00000511816 DNAH1Q9P2D7 4330 aa0.51□□□□□ -2.33
CALCOCO2-220ENST00000511816 APELAP0DMC3 54 aa0.51□□□□□ -2.33
CALCOCO2-220ENST00000511816 AKAP9Q99996 3911 aa0.51□□□□□ -2.33
CALCOCO2-220ENST00000511816 MYO18BQ8IUG5 2567 aa0.51□□□□□ -2.33
CALCOCO2-220ENST00000511816 RELNP78509 3460 aa0.5□□□□□ -2.33
CALCOCO2-220ENST00000511816 SMR3BP02814 79 aaPredicted RBP0.5□□□□□ -2.33
CALCOCO2-220ENST00000511816 DEFB136Q30KP8 78 aa0.5□□□□□ -2.33
CALCOCO2-220ENST00000511816 MAP1AP78559 2803 aaPredicted RBP0.5□□□□□ -2.33
CALCOCO2-220ENST00000511816 HTN1P15515 57 aa0.49□□□□□ -2.33
CALCOCO2-220ENST00000511816 DEFB124Q8NES8 71 aa0.49□□□□□ -2.33
CALCOCO2-220ENST00000511816 SPRR2FQ96RM1 72 aa0.49□□□□□ -2.33
CALCOCO2-220ENST00000511816 LAMA1P25391 3075 aa0.49□□□□□ -2.33
CALCOCO2-220ENST00000511816 DMXL2Q8TDJ6 3036 aa0.49□□□□□ -2.33
CALCOCO2-220ENST00000511816 USP9XQ93008 2570 aaPredicted RBP0.48□□□□□ -2.33
CALCOCO2-220ENST00000511816 SPRR2EP22531 72 aa0.48□□□□□ -2.33
CALCOCO2-220ENST00000511816 KRTAP19-5Q3LI72 72 aa0.48□□□□□ -2.33
CALCOCO2-220ENST00000511816 FAT3Q8TDW7 4589 aa0.48□□□□□ -2.33
CALCOCO2-220ENST00000511816 FLNAP21333 2647 aaKnown RBP0.48□□□□□ -2.33
CALCOCO2-220ENST00000511816 SPTBN5Q9NRC6 3674 aaKnown RBP0.48□□□□□ -2.33
CALCOCO2-220ENST00000511816 MAST4O15021 2626 aa0.47□□□□□ -2.33
CALCOCO2-220ENST00000511816 DEFB1P60022 68 aa0.47□□□□□ -2.33
CALCOCO2-220ENST00000511816 MGAM2Q2M2H8 2515 aa0.47□□□□□ -2.33
CALCOCO2-220ENST00000511816 NIPBLQ6KC79 2804 aaeCLIP0.47□□□□□ -2.33
CALCOCO2-220ENST00000511816 LRP1BQ9NZR2 4599 aa0.47□□□□□ -2.33
CALCOCO2-220ENST00000511816 LAMA3Q16787 3333 aa0.46□□□□□ -2.34
CALCOCO2-220ENST00000511816 CSMD1Q96PZ7 3565 aa0.46□□□□□ -2.34
CALCOCO2-220ENST00000511816 DNAH10Q8IVF4 4471 aa0.46□□□□□ -2.34
CALCOCO2-220ENST00000511816 CEP250Q9BV73 2442 aa0.45□□□□□ -2.34
CALCOCO2-220ENST00000511816 SVEP1Q4LDE5 3571 aa0.45□□□□□ -2.34
CALCOCO2-220ENST00000511816 FAT4Q6V0I7 4981 aa0.44□□□□□ -2.34
CALCOCO2-220ENST00000511816 ADGRG4Q8IZF6 3080 aa0.44□□□□□ -2.34
CALCOCO2-220ENST00000511816 FRYLO94915 3013 aa0.43□□□□□ -2.34
CALCOCO2-220ENST00000511816 SYNE2Q8WXH0 6885 aaKnown RBP0.43□□□□□ -2.34
CALCOCO2-220ENST00000511816 LRBAP50851 2863 aa0.43□□□□□ -2.34
CALCOCO2-220ENST00000511816 DEFB133Q30KQ1 61 aa0.43□□□□□ -2.34
CALCOCO2-220ENST00000511816 HMCN2Q8NDA2 5059 aa0.43□□□□□ -2.34
CALCOCO2-220ENST00000511816 ATMQ13315 3056 aa0.43□□□□□ -2.34
CALCOCO2-220ENST00000511816 CMYA5Q8N3K9 4069 aa0.42□□□□□ -2.34
CALCOCO2-220ENST00000511816 NBEAL1Q6ZS30 2694 aa0.41□□□□□ -2.34
CALCOCO2-220ENST00000511816 FAT1Q14517 4588 aa0.41□□□□□ -2.34
CALCOCO2-220ENST00000511816 PRUNE2Q8WUY3 3088 aa0.41□□□□□ -2.34
CALCOCO2-220ENST00000511816 TEX15Q9BXT5 2789 aa0.4□□□□□ -2.35
CALCOCO2-220ENST00000511816 KMT2DO14686 5537 aa0.39□□□□□ -2.35
CALCOCO2-220ENST00000511816 PHGR1C9JFL3 82 aa0.39□□□□□ -2.35
CALCOCO2-220ENST00000511816 SPTAN1Q13813 2472 aaKnown RBP0.38□□□□□ -2.35
CALCOCO2-220ENST00000511816 C5orf42Q9H799 3197 aa0.38□□□□□ -2.35
CALCOCO2-220ENST00000511816 PLECQ15149 4684 aaKnown RBP0.37□□□□□ -2.35
CALCOCO2-220ENST00000511816 STAB2Q8WWQ8 2551 aa0.37□□□□□ -2.35
CALCOCO2-220ENST00000511816 FSIP2Q5CZC0 6907 aa0.37□□□□□ -2.35
CALCOCO2-220ENST00000511816 MDN1Q9NU22 5596 aa0.36□□□□□ -2.35
CALCOCO2-220ENST00000511816 DNAH12Q6ZR08 3092 aa0.36□□□□□ -2.35
CALCOCO2-220ENST00000511816 SMG1Q96Q15 3661 aaKnown RBP0.35□□□□□ -2.35
CALCOCO2-220ENST00000511816 DNAH17Q9UFH2 4485 aa0.35□□□□□ -2.35
CALCOCO2-220ENST00000511816 RPS29P62273 56 aaKnown RBP0.35□□□□□ -2.35
CALCOCO2-220ENST00000511816 ITPR2Q14571 2701 aa0.35□□□□□ -2.35
CALCOCO2-220ENST00000511816 LRP2P98164 4655 aa0.34□□□□□ -2.35
CALCOCO2-220ENST00000511816 DOPEY1Q5JWR5 2465 aa0.34□□□□□ -2.36
CALCOCO2-220ENST00000511816 TRRAPQ9Y4A5 3859 aa0.34□□□□□ -2.36
CALCOCO2-220ENST00000511816 CFAP46Q8IYW2 2715 aa0.34□□□□□ -2.36
CALCOCO2-220ENST00000511816 MACF1Q9UPN3 7388 aaKnown RBP0.33□□□□□ -2.36
CALCOCO2-220ENST00000511816 MUC3AQ02505 3323 aa0.31□□□□□ -2.36
CALCOCO2-220ENST00000511816 DYNC1H1Q14204 4646 aaKnown RBP0.31□□□□□ -2.36
CALCOCO2-220ENST00000511816 A0A096LPF7 62 aa0.31□□□□□ -2.36
CALCOCO2-220ENST00000511816 CD52P31358 61 aa0.31□□□□□ -2.36
CALCOCO2-220ENST00000511816 HERC1Q15751 4861 aa0.31□□□□□ -2.36
CALCOCO2-220ENST00000511816 MT1HP80294 61 aa0.3□□□□□ -2.36
CALCOCO2-220ENST00000511816 SZT2Q5T011 3432 aa0.29□□□□□ -2.36
CALCOCO2-220ENST00000511816 STATHP02808 62 aa0.29□□□□□ -2.36
CALCOCO2-220ENST00000511816 MT1EP04732 61 aa0.29□□□□□ -2.36
CALCOCO2-220ENST00000511816 LINC01556Q5JQF7 62 aa0.29□□□□□ -2.36
CALCOCO2-220ENST00000511816 MKI67P46013 3256 aaKnown RBP0.29□□□□□ -2.36
CALCOCO2-220ENST00000511816 CEP295Q9C0D2 2601 aa0.29□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms