RNA–Protein interactions for RNA: ENST00000511732.1

COL1A1-213, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-213ENST00000511732 TRAV22A0A0B4J277 110 aa6.74□□□□□ -1.33
COL1A1-213ENST00000511732 K7ERU9 68 aa6.72□□□□□ -1.33
COL1A1-213ENST00000511732 LOC101927531A0A1B0GV80 90 aa6.71□□□□□ -1.34
COL1A1-213ENST00000511732 MUC12Q9UKN1 5478 aa6.7□□□□□ -1.34
COL1A1-213ENST00000511732 FAM240AA0A1B0GVK7 77 aa6.69□□□□□ -1.34
COL1A1-213ENST00000511732 NEBP20929 6669 aa6.68□□□□□ -1.34
COL1A1-213ENST00000511732 CRIPTQ9P021 101 aa6.66□□□□□ -1.34
COL1A1-213ENST00000511732 HIST1H4AP62805 103 aaKnown RBP6.64□□□□□ -1.35
COL1A1-213ENST00000511732 H0Y9P7 68 aa6.63□□□□□ -1.35
COL1A1-213ENST00000511732 UQCRQO14949 82 aa6.63□□□□□ -1.35
COL1A1-213ENST00000511732 LINC00643Q86TS7 51 aa6.63□□□□□ -1.35
COL1A1-213ENST00000511732 IMUPQ9GZP8 106 aa6.63□□□□□ -1.35
COL1A1-213ENST00000511732 ATP5EP2Q5VTU8 51 aa6.62□□□□□ -1.35
COL1A1-213ENST00000511732 H0YAA0 97 aa6.6□□□□□ -1.35
COL1A1-213ENST00000511732 KRTAP5-9P26371 169 aa6.6□□□□□ -1.35
COL1A1-213ENST00000511732 NDUFC1O43677 76 aa6.59□□□□□ -1.35
COL1A1-213ENST00000511732 ATOX1O00244 68 aa6.58□□□□□ -1.36
COL1A1-213ENST00000511732 ADM2Q7Z4H4 148 aa6.54□□□□□ -1.36
COL1A1-213ENST00000511732 A8MUN3 132 aa6.52□□□□□ -1.37
COL1A1-213ENST00000511732 LINC00208Q96KT6 92 aa6.52□□□□□ -1.37
COL1A1-213ENST00000511732 SCGB1A1P11684 91 aa6.51□□□□□ -1.37
COL1A1-213ENST00000511732 MDN1Q9NU22 5596 aa6.51□□□□□ -1.37
COL1A1-213ENST00000511732 KMT2DO14686 5537 aa6.51□□□□□ -1.37
COL1A1-213ENST00000511732 KRTAP3-2Q9BYR7 98 aa6.5□□□□□ -1.37
COL1A1-213ENST00000511732 KRTAP20-1Q3LI63 56 aa6.49□□□□□ -1.37
COL1A1-213ENST00000511732 OCR1Q9BZK8 76 aa6.48□□□□□ -1.37
COL1A1-213ENST00000511732 MT1XP80297 61 aa6.45□□□□□ -1.38
COL1A1-213ENST00000511732 MT-ATP8P03928 68 aa6.44□□□□□ -1.38
COL1A1-213ENST00000511732 MP68P56378 58 aa6.42□□□□□ -1.38
COL1A1-213ENST00000511732 P0C880 135 aa6.39□□□□□ -1.39
COL1A1-213ENST00000511732 PRO2289Q9P1D8 64 aa6.39□□□□□ -1.39
COL1A1-213ENST00000511732 PLAC4Q8WY50 150 aa6.37□□□□□ -1.39
COL1A1-213ENST00000511732 SPRR2FQ96RM1 72 aa6.36□□□□□ -1.39
COL1A1-213ENST00000511732 R4GN34 69 aa6.35□□□□□ -1.39
COL1A1-213ENST00000511732 DMAC1Q96GE9 116 aa6.33□□□□□ -1.4
COL1A1-213ENST00000511732 SMIM20Q8N5G0 67 aa6.32□□□□□ -1.4
COL1A1-213ENST00000511732 H3BPC8 53 aa6.31□□□□□ -1.4
COL1A1-213ENST00000511732 M0QZ58 72 aa6.31□□□□□ -1.4
COL1A1-213ENST00000511732 SPRR2EP22531 72 aa6.3□□□□□ -1.4
COL1A1-213ENST00000511732 SPRR2BP35325 72 aa6.3□□□□□ -1.4
COL1A1-213ENST00000511732 SPRR2AP35326 72 aa6.3□□□□□ -1.4
COL1A1-213ENST00000511732 KRTAP2-3P0C7H8 128 aa6.29□□□□□ -1.4
COL1A1-213ENST00000511732 KRTAP12-2P59991 146 aa6.29□□□□□ -1.4
COL1A1-213ENST00000511732 KRTAP8-1Q8IUC2 63 aa6.29□□□□□ -1.4
COL1A1-213ENST00000511732 C20orf197Q8N268 126 aa6.29□□□□□ -1.4
COL1A1-213ENST00000511732 KRTAP2-4Q9BYR9 128 aa6.29□□□□□ -1.4
COL1A1-213ENST00000511732 KRTAP4-8A0A0G2JLE6 195 aa6.25□□□□□ -1.41
COL1A1-213ENST00000511732 KRTAP4-8Q9BYQ9 185 aa6.25□□□□□ -1.41
COL1A1-213ENST00000511732 TRAV7A0A075B6U4 112 aa6.24□□□□□ -1.41
COL1A1-213ENST00000511732 LINC01554Q52M75 96 aa6.23□□□□□ -1.41
COL1A1-213ENST00000511732 LCE1AQ5T7P2 110 aa6.22□□□□□ -1.41
COL1A1-213ENST00000511732 KRTAP10-7P60409 375 aaPredicted RBP6.17□□□□□ -1.42
COL1A1-213ENST00000511732 SERP2Q8N6R1 65 aa6.17□□□□□ -1.42
COL1A1-213ENST00000511732 ANAPC13Q9BS18 74 aa6.17□□□□□ -1.42
COL1A1-213ENST00000511732 ACYP2P14621 99 aa6.12□□□□□ -1.43
COL1A1-213ENST00000511732 KRTAP10-12P60413 245 aa6.12□□□□□ -1.43
COL1A1-213ENST00000511732 SPTSSBQ8NFR3 76 aa6.09□□□□□ -1.43
COL1A1-213ENST00000511732 KRTAP2-2Q9BYT5 123 aa6.09□□□□□ -1.43
COL1A1-213ENST00000511732 KRTAP2-1Q9BYU5 128 aa6.09□□□□□ -1.43
COL1A1-213ENST00000511732 SNURFQ9Y675 71 aa6.09□□□□□ -1.43
COL1A1-213ENST00000511732 COX7CP15954 63 aa6.08□□□□□ -1.44
COL1A1-213ENST00000511732 SPRR2DP22532 72 aa6.08□□□□□ -1.44
COL1A1-213ENST00000511732 CHKB-CPT1BH3BT56 60 aa5.99□□□□□ -1.45
COL1A1-213ENST00000511732 KRTAP13-4Q3LI77 160 aa5.94□□□□□ -1.46
COL1A1-213ENST00000511732 LCE3BQ5TA77 95 aa5.94□□□□□ -1.46
COL1A1-213ENST00000511732 CCDC179H3BU77 68 aa5.92□□□□□ -1.46
COL1A1-213ENST00000511732 SPANXA2-OT1Q8N9U9 137 aa5.9□□□□□ -1.46
COL1A1-213ENST00000511732 H7BZZ5 65 aa5.84□□□□□ -1.47
COL1A1-213ENST00000511732 PCP4P48539 62 aa5.82□□□□□ -1.48
COL1A1-213ENST00000511732 CAMK2N1Q7Z7J9 78 aa5.81□□□□□ -1.48
COL1A1-213ENST00000511732 ATP5EP56381 51 aaPredicted RBP5.79□□□□□ -1.48
COL1A1-213ENST00000511732 CYSTM1Q9H1C7 97 aa5.79□□□□□ -1.48
COL1A1-213ENST00000511732 KRTAP19-7Q3SYF9 63 aa5.78□□□□□ -1.48
COL1A1-213ENST00000511732 TMEM258P61165 79 aa5.76□□□□□ -1.49
COL1A1-213ENST00000511732 COA5Q86WW8 74 aa5.75□□□□□ -1.49
COL1A1-213ENST00000511732 LCE5AQ5TCM9 118 aa5.73□□□□□ -1.49
COL1A1-213ENST00000511732 MT1EP04732 61 aa5.72□□□□□ -1.49
COL1A1-213ENST00000511732 DSTQ03001 7570 aaKnown RBP5.72□□□□□ -1.49
COL1A1-213ENST00000511732 A0A0D9SG42 100 aa5.7□□□□□ -1.5
COL1A1-213ENST00000511732 SEC61GP60059 68 aa5.7□□□□□ -1.5
COL1A1-213ENST00000511732 KRTAP19-3Q7Z4W3 81 aa5.69□□□□□ -1.5
COL1A1-213ENST00000511732 SPATA8Q6RVD6 105 aa5.68□□□□□ -1.5
COL1A1-213ENST00000511732 SERP1Q9Y6X1 66 aa5.68□□□□□ -1.5
COL1A1-213ENST00000511732 SPINT4Q6UDR6 99 aa5.62□□□□□ -1.51
COL1A1-213ENST00000511732 A0A1B0GU33 70 aa5.6□□□□□ -1.51
COL1A1-213ENST00000511732 KRTAP12-1P59990 96 aa5.6□□□□□ -1.51
COL1A1-213ENST00000511732 KRTAP4-9Q9BYQ8 210 aa5.59□□□□□ -1.51
COL1A1-213ENST00000511732 KRTAP19-5Q3LI72 72 aa5.58□□□□□ -1.52
COL1A1-213ENST00000511732 SVIPQ8NHG7 77 aa5.56□□□□□ -1.52
COL1A1-213ENST00000511732 PRR15LQ9BU68 103 aa5.55□□□□□ -1.52
COL1A1-213ENST00000511732 A0A1B0GU69 56 aa5.54□□□□□ -1.52
COL1A1-213ENST00000511732 MT1GP13640 62 aa5.53□□□□□ -1.52
COL1A1-213ENST00000511732 GPR98Q8WXG9 6306 aa5.5□□□□□ -1.53
COL1A1-213ENST00000511732 H3BS24 57 aa5.47□□□□□ -1.53
COL1A1-213ENST00000511732 V9GYY9 64 aa5.47□□□□□ -1.53
COL1A1-213ENST00000511732 MT1MQ8N339 61 aa5.46□□□□□ -1.54
COL1A1-213ENST00000511732 A8MU10 97 aa5.45□□□□□ -1.54
COL1A1-213ENST00000511732 SMIM26A0A096LP01 95 aa5.44□□□□□ -1.54
COL1A1-213ENST00000511732 PP632Q6XCG6 107 aa5.44□□□□□ -1.54
COL1A1-213ENST00000511732 MT1LQ93083 61 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms