RNA–Protein interactions for RNA: ENST00000510098.1

CAST-229, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 1,323 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-229ENST00000510098 BRCA2P51587 3418 aa0.66□□□□□ -2.3
CAST-229ENST00000510098 M0R2T5 61 aa0.65□□□□□ -2.3
CAST-229ENST00000510098 S4R3F8 94 aa0.65□□□□□ -2.3
CAST-229ENST00000510098 CELSR1Q9NYQ6 3014 aa0.65□□□□□ -2.3
CAST-229ENST00000510098 FAT2Q9NYQ8 4349 aa0.65□□□□□ -2.31
CAST-229ENST00000510098 AHNAKQ09666 5890 aaKnown RBP0.65□□□□□ -2.31
CAST-229ENST00000510098 RPS29P62273 56 aaKnown RBP0.64□□□□□ -2.31
CAST-229ENST00000510098 NF1P21359 2839 aa0.64□□□□□ -2.31
CAST-229ENST00000510098 VPS13CQ709C8 3753 aa0.64□□□□□ -2.31
CAST-229ENST00000510098 KALRNO60229 2985 aa0.64□□□□□ -2.31
CAST-229ENST00000510098 CHD8Q9HCK8 2581 aa0.64□□□□□ -2.31
CAST-229ENST00000510098 DNAH12Q6ZR08 3092 aa0.64□□□□□ -2.31
CAST-229ENST00000510098 NCOR1O75376 2440 aa0.64□□□□□ -2.31
CAST-229ENST00000510098 DNAH14Q0VDD8 3507 aa0.64□□□□□ -2.31
CAST-229ENST00000510098 TENM2Q9NT68 2774 aa0.64□□□□□ -2.31
CAST-229ENST00000510098 TNXBP22105 4242 aa0.64□□□□□ -2.31
CAST-229ENST00000510098 CSMD1Q96PZ7 3565 aa0.63□□□□□ -2.31
CAST-229ENST00000510098 PTPN13Q12923 2485 aa0.63□□□□□ -2.31
CAST-229ENST00000510098 LRP1Q07954 4544 aaKnown RBP0.63□□□□□ -2.31
CAST-229ENST00000510098 MYO15AQ9UKN7 3530 aa0.63□□□□□ -2.31
CAST-229ENST00000510098 MUC17Q685J3 4493 aa0.63□□□□□ -2.31
CAST-229ENST00000510098 DMXL1Q9Y485 3027 aa0.63□□□□□ -2.31
CAST-229ENST00000510098 MUC5BQ9HC84 5762 aaPredicted RBP0.63□□□□□ -2.31
CAST-229ENST00000510098 M0QZ58 72 aa0.63□□□□□ -2.31
CAST-229ENST00000510098 HERC1Q15751 4861 aa0.62□□□□□ -2.31
CAST-229ENST00000510098 WDR87Q6ZQQ6 2873 aa0.62□□□□□ -2.31
CAST-229ENST00000510098 LRBAP50851 2863 aa0.61□□□□□ -2.31
CAST-229ENST00000510098 UBR5O95071 2799 aaPredicted RBP0.61□□□□□ -2.31
CAST-229ENST00000510098 ADGRG4Q8IZF6 3080 aa0.61□□□□□ -2.31
CAST-229ENST00000510098 C9orf92A6NGG3 77 aa0.61□□□□□ -2.31
CAST-229ENST00000510098 CDH23Q9H251 3354 aa0.6□□□□□ -2.31
CAST-229ENST00000510098 FAT1Q14517 4588 aa0.6□□□□□ -2.31
CAST-229ENST00000510098 HECTD1Q9ULT8 2610 aa0.6□□□□□ -2.31
CAST-229ENST00000510098 LPAP08519 4548 aa0.6□□□□□ -2.31
CAST-229ENST00000510098 AKAP13Q12802 2813 aa0.59□□□□□ -2.31
CAST-229ENST00000510098 PKD1L1Q8TDX9 2849 aa0.59□□□□□ -2.31
CAST-229ENST00000510098 CREBBPQ92793 2442 aa0.59□□□□□ -2.31
CAST-229ENST00000510098 DCHS2Q6V1P9 2916 aa0.59□□□□□ -2.31
CAST-229ENST00000510098 PDZD2O15018 2839 aa0.59□□□□□ -2.31
CAST-229ENST00000510098 ITPR1Q14643 2758 aa0.59□□□□□ -2.32
CAST-229ENST00000510098 PRM1P04553 51 aa0.59□□□□□ -2.32
CAST-229ENST00000510098 EP300Q09472 2414 aaPredicted RBP0.59□□□□□ -2.32
CAST-229ENST00000510098 SETD2Q9BYW2 2564 aaPredicted RBP0.59□□□□□ -2.32
CAST-229ENST00000510098 ACACAQ13085 2346 aa0.59□□□□□ -2.32
CAST-229ENST00000510098 CUBNO60494 3623 aa0.58□□□□□ -2.32
CAST-229ENST00000510098 EYSQ5T1H1 3165 aa0.58□□□□□ -2.32
CAST-229ENST00000510098 CEP250Q9BV73 2442 aa0.58□□□□□ -2.32
CAST-229ENST00000510098 SPTBN4Q9H254 2564 aa0.58□□□□□ -2.32
CAST-229ENST00000510098 CSMD2Q7Z408 3487 aa0.58□□□□□ -2.32
CAST-229ENST00000510098 USP24Q9UPU5 2620 aa0.57□□□□□ -2.32
CAST-229ENST00000510098 LRP2P98164 4655 aa0.57□□□□□ -2.32
CAST-229ENST00000510098 MAP1AP78559 2803 aaPredicted RBP0.57□□□□□ -2.32
CAST-229ENST00000510098 NIPBLQ6KC79 2804 aaeCLIP0.57□□□□□ -2.326e-9■■■■□ 19.5
CAST-229ENST00000510098 RIF1Q5UIP0 2472 aaKnown RBP0.57□□□□□ -2.32
CAST-229ENST00000510098 STARD9Q9P2P6 4700 aa0.57□□□□□ -2.32
CAST-229ENST00000510098 NAV2Q8IVL1 2488 aa0.57□□□□□ -2.32
CAST-229ENST00000510098 HIVEP3Q5T1R4 2406 aa0.56□□□□□ -2.32
CAST-229ENST00000510098 TNP1P09430 55 aa0.56□□□□□ -2.32
CAST-229ENST00000510098 KRTAP21-1Q3LI58 79 aa0.56□□□□□ -2.32
CAST-229ENST00000510098 TACC2O95359 2948 aa0.56□□□□□ -2.32
CAST-229ENST00000510098 LRP1BQ9NZR2 4599 aa0.56□□□□□ -2.32
CAST-229ENST00000510098 SRRM2Q9UQ35 2752 aaKnown RBP0.56□□□□□ -2.32
CAST-229ENST00000510098 SVEP1Q4LDE5 3571 aa0.56□□□□□ -2.32
CAST-229ENST00000510098 COL7A1Q02388 2944 aa0.55□□□□□ -2.32
CAST-229ENST00000510098 MAP1BP46821 2468 aaKnown RBP0.55□□□□□ -2.32
CAST-229ENST00000510098 CEP290O15078 2479 aa0.54□□□□□ -2.32
CAST-229ENST00000510098 APC2O95996 2303 aa0.53□□□□□ -2.32
CAST-229ENST00000510098 CCDC168Q8NDH2 2452 aa0.53□□□□□ -2.32
CAST-229ENST00000510098 NCOR2Q9Y618 2525 aa0.53□□□□□ -2.32
CAST-229ENST00000510098 SMR3BP02814 79 aaPredicted RBP0.53□□□□□ -2.32
CAST-229ENST00000510098 DMBT1Q9UGM3 2413 aaPredicted RBP0.53□□□□□ -2.33
CAST-229ENST00000510098 PKD1L2Q7Z442 2459 aa0.52□□□□□ -2.33
CAST-229ENST00000510098 USP9YO00507 2555 aaPredicted RBP0.52□□□□□ -2.33
CAST-229ENST00000510098 ANKHD1Q8IWZ3 2542 aaKnown RBP0.52□□□□□ -2.33
CAST-229ENST00000510098 ITPR3Q14573 2671 aa0.51□□□□□ -2.33
CAST-229ENST00000510098 SETXQ7Z333 2677 aaKnown RBP0.51□□□□□ -2.33
CAST-229ENST00000510098 FAM186AA6NE01 2351 aa0.51□□□□□ -2.33
CAST-229ENST00000510098 SYNE1Q8NF91 8797 aaKnown RBP0.51□□□□□ -2.33
CAST-229ENST00000510098 KRTAP8-1Q8IUC2 63 aa0.51□□□□□ -2.33
CAST-229ENST00000510098 UTP20O75691 2785 aaKnown RBP0.51□□□□□ -2.33
CAST-229ENST00000510098 MXRA5Q9NR99 2828 aa0.51□□□□□ -2.33
CAST-229ENST00000510098 MACF1Q9UPN3 7388 aaKnown RBP0.51□□□□□ -2.33
CAST-229ENST00000510098 HIVEP1P15822 2718 aa0.5□□□□□ -2.33
CAST-229ENST00000510098 DNHD1Q96M86 4753 aa0.5□□□□□ -2.33
CAST-229ENST00000510098 SPRR2DP22532 72 aa0.5□□□□□ -2.33
CAST-229ENST00000510098 EPG5Q9HCE0 2579 aa0.5□□□□□ -2.33
CAST-229ENST00000510098 NBASA2RRP1 2371 aa0.5□□□□□ -2.33
CAST-229ENST00000510098 COL6A5A8TX70 2615 aa0.5□□□□□ -2.33
CAST-229ENST00000510098 IGSF10Q6WRI0 2623 aa0.5□□□□□ -2.33
CAST-229ENST00000510098 ITPR2Q14571 2701 aa0.5□□□□□ -2.33
CAST-229ENST00000510098 MUC5ACP98088 5654 aa0.5□□□□□ -2.33
CAST-229ENST00000510098 NBEAL2Q6ZNJ1 2754 aa0.49□□□□□ -2.33
CAST-229ENST00000510098 STAB1Q9NY15 2570 aa0.49□□□□□ -2.33
CAST-229ENST00000510098 ZANQ9Y493 2812 aa0.49□□□□□ -2.33
CAST-229ENST00000510098 TEX15Q9BXT5 2789 aa0.49□□□□□ -2.33
CAST-229ENST00000510098 NSD1Q96L73 2696 aaPredicted RBP0.49□□□□□ -2.33
CAST-229ENST00000510098 BIRC6Q9NR09 4857 aa0.49□□□□□ -2.33
CAST-229ENST00000510098 FLNCQ14315 2725 aa0.48□□□□□ -2.33
CAST-229ENST00000510098 MT1HL1P0DM35 61 aa0.48□□□□□ -2.33
CAST-229ENST00000510098 KRTAP19-2Q3LHN2 52 aa0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms