RNA–Protein interactions for RNA: ENST00000508940.1

PROM1-209, Transcript of prominin 1, humanhuman

TSL 4

Gene PROM1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-209ENST00000508940 MP68P56378 58 aa11.04□□□□□ -0.64
PROM1-209ENST00000508940 KLKP1Q107X0 134 aa11.01□□□□□ -0.65
PROM1-209ENST00000508940 NDUFC1O43677 76 aa11□□□□□ -0.65
PROM1-209ENST00000508940 OCR1Q9BZK8 76 aa11□□□□□ -0.65
PROM1-209ENST00000508940 A8MUN3 132 aa10.98□□□□□ -0.65
PROM1-209ENST00000508940 SPRR2GQ9BYE4 73 aa10.97□□□□□ -0.65
PROM1-209ENST00000508940 IMUPQ9GZP8 106 aa10.96□□□□□ -0.65
PROM1-209ENST00000508940 Q5VV11 94 aa10.95□□□□□ -0.66
PROM1-209ENST00000508940 SCGB1A1P11684 91 aa10.91□□□□□ -0.66
PROM1-209ENST00000508940 MACF1Q9UPN3 7388 aaKnown RBP10.9□□□□□ -0.66
PROM1-209ENST00000508940 KRTAP19-8Q3LI54 63 aa10.89□□□□□ -0.67
PROM1-209ENST00000508940 CRIPTQ9P021 101 aa10.88□□□□□ -0.67
PROM1-209ENST00000508940 H3BPC8 53 aa10.87□□□□□ -0.67
PROM1-209ENST00000508940 MT1BP07438 61 aa10.87□□□□□ -0.67
PROM1-209ENST00000508940 H0YAA0 97 aa10.81□□□□□ -0.68
PROM1-209ENST00000508940 A6NN06 94 aa10.8□□□□□ -0.68
PROM1-209ENST00000508940 ADM2Q7Z4H4 148 aa10.74□□□□□ -0.69
PROM1-209ENST00000508940 SYNE2Q8WXH0 6885 aaKnown RBP10.73□□□□□ -0.69
PROM1-209ENST00000508940 K7ERU9 68 aa10.67□□□□□ -0.7
PROM1-209ENST00000508940 DMAC1Q96GE9 116 aa10.66□□□□□ -0.7
PROM1-209ENST00000508940 MT-ATP8P03928 68 aa10.64□□□□□ -0.71
PROM1-209ENST00000508940 KRTAP10-5P60370 271 aa10.63□□□□□ -0.71
PROM1-209ENST00000508940 KRTAP6-3Q3LI67 103 aa10.63□□□□□ -0.71
PROM1-209ENST00000508940 SMIM20Q8N5G0 67 aa10.6□□□□□ -0.71
PROM1-209ENST00000508940 TRAV7A0A075B6U4 112 aa10.56□□□□□ -0.72
PROM1-209ENST00000508940 C20orf197Q8N268 126 aa10.53□□□□□ -0.72
PROM1-209ENST00000508940 ACYP2P14621 99 aa10.48□□□□□ -0.73
PROM1-209ENST00000508940 R4GN34 69 aa10.48□□□□□ -0.73
PROM1-209ENST00000508940 P0C880 135 aa10.46□□□□□ -0.73
PROM1-209ENST00000508940 PLAC4Q8WY50 150 aa10.41□□□□□ -0.74
PROM1-209ENST00000508940 M0QZ58 72 aa10.39□□□□□ -0.75
PROM1-209ENST00000508940 SPTSSBQ8NFR3 76 aa10.38□□□□□ -0.75
PROM1-209ENST00000508940 KRTAP3-2Q9BYR7 98 aa10.35□□□□□ -0.75
PROM1-209ENST00000508940 PRO2289Q9P1D8 64 aa10.34□□□□□ -0.75
PROM1-209ENST00000508940 SNURFQ9Y675 71 aa10.33□□□□□ -0.76
PROM1-209ENST00000508940 CHKB-CPT1BH3BT56 60 aa10.32□□□□□ -0.76
PROM1-209ENST00000508940 LINC01554Q52M75 96 aa10.25□□□□□ -0.77
PROM1-209ENST00000508940 MT1XP80297 61 aa10.22□□□□□ -0.77
PROM1-209ENST00000508940 SERP2Q8N6R1 65 aa10.22□□□□□ -0.77
PROM1-209ENST00000508940 SPANXA2-OT1Q8N9U9 137 aa10.18□□□□□ -0.78
PROM1-209ENST00000508940 KRTAP5-9P26371 169 aa10.13□□□□□ -0.79
PROM1-209ENST00000508940 NEBP20929 6669 aa10.11□□□□□ -0.79
PROM1-209ENST00000508940 MUC12Q9UKN1 5478 aa10.03□□□□□ -0.8
PROM1-209ENST00000508940 KRTAP12-2P59991 146 aa9.97□□□□□ -0.81
PROM1-209ENST00000508940 COX7CP15954 63 aa9.92□□□□□ -0.82
PROM1-209ENST00000508940 KRTAP8-1Q8IUC2 63 aa9.91□□□□□ -0.82
PROM1-209ENST00000508940 SPRR2FQ96RM1 72 aa9.91□□□□□ -0.82
PROM1-209ENST00000508940 COA5Q86WW8 74 aa9.9□□□□□ -0.82
PROM1-209ENST00000508940 KMT2DO14686 5537 aa9.88□□□□□ -0.83
PROM1-209ENST00000508940 KRTAP20-1Q3LI63 56 aa9.82□□□□□ -0.84
PROM1-209ENST00000508940 SEC61GP60059 68 aa9.79□□□□□ -0.84
PROM1-209ENST00000508940 MDN1Q9NU22 5596 aa9.77□□□□□ -0.84
PROM1-209ENST00000508940 KRTAP13-4Q3LI77 160 aa9.77□□□□□ -0.85
PROM1-209ENST00000508940 SERP1Q9Y6X1 66 aa9.77□□□□□ -0.85
PROM1-209ENST00000508940 KRTAP4-8A0A0G2JLE6 195 aa9.75□□□□□ -0.85
PROM1-209ENST00000508940 SPRR2EP22531 72 aa9.75□□□□□ -0.85
PROM1-209ENST00000508940 SPRR2BP35325 72 aa9.75□□□□□ -0.85
PROM1-209ENST00000508940 SPRR2AP35326 72 aa9.75□□□□□ -0.85
PROM1-209ENST00000508940 KRTAP10-7P60409 375 aaPredicted RBP9.75□□□□□ -0.85
PROM1-209ENST00000508940 KRTAP4-8Q9BYQ9 185 aa9.75□□□□□ -0.85
PROM1-209ENST00000508940 H7BZZ5 65 aa9.72□□□□□ -0.85
PROM1-209ENST00000508940 KRTAP10-12P60413 245 aa9.71□□□□□ -0.86
PROM1-209ENST00000508940 CYSTM1Q9H1C7 97 aa9.68□□□□□ -0.86
PROM1-209ENST00000508940 CAMK2N1Q7Z7J9 78 aa9.67□□□□□ -0.86
PROM1-209ENST00000508940 ANAPC13Q9BS18 74 aa9.62□□□□□ -0.87
PROM1-209ENST00000508940 KRTAP2-3P0C7H8 128 aa9.59□□□□□ -0.87
PROM1-209ENST00000508940 LCE1AQ5T7P2 110 aa9.59□□□□□ -0.87
PROM1-209ENST00000508940 KRTAP2-4Q9BYR9 128 aa9.59□□□□□ -0.87
PROM1-209ENST00000508940 A0A0D9SG42 100 aa9.57□□□□□ -0.88
PROM1-209ENST00000508940 A0A1B0GU33 70 aa9.56□□□□□ -0.88
PROM1-209ENST00000508940 SPATA8Q6RVD6 105 aa9.53□□□□□ -0.88
PROM1-209ENST00000508940 SPINT4Q6UDR6 99 aa9.45□□□□□ -0.9
PROM1-209ENST00000508940 A0A1B0GU69 56 aa9.44□□□□□ -0.9
PROM1-209ENST00000508940 SPRR2DP22532 72 aa9.43□□□□□ -0.9
PROM1-209ENST00000508940 CCDC179H3BU77 68 aa9.38□□□□□ -0.91
PROM1-209ENST00000508940 SMIM26A0A096LP01 95 aa9.32□□□□□ -0.92
PROM1-209ENST00000508940 KRTAP12-1P59990 96 aa9.32□□□□□ -0.92
PROM1-209ENST00000508940 ATP5EP56381 51 aaPredicted RBP9.3□□□□□ -0.92
PROM1-209ENST00000508940 KRTAP2-2Q9BYT5 123 aa9.29□□□□□ -0.92
PROM1-209ENST00000508940 KRTAP2-1Q9BYU5 128 aa9.29□□□□□ -0.92
PROM1-209ENST00000508940 PRR15LQ9BU68 103 aa9.2□□□□□ -0.94
PROM1-209ENST00000508940 A8MU10 97 aa9.18□□□□□ -0.94
PROM1-209ENST00000508940 LCE3BQ5TA77 95 aa9.15□□□□□ -0.94
PROM1-209ENST00000508940 KRTAP19-7Q3SYF9 63 aa9.11□□□□□ -0.95
PROM1-209ENST00000508940 LINC01558Q9Y6Z2 57 aa9.07□□□□□ -0.96
PROM1-209ENST00000508940 MT1EP04732 61 aa9.05□□□□□ -0.96
PROM1-209ENST00000508940 TMEM258P61165 79 aa9.05□□□□□ -0.96
PROM1-209ENST00000508940 LCE5AQ5TCM9 118 aa8.97□□□□□ -0.97
PROM1-209ENST00000508940 KRTAP19-3Q7Z4W3 81 aa8.97□□□□□ -0.97
PROM1-209ENST00000508940 KRTAP19-5Q3LI72 72 aa8.95□□□□□ -0.98
PROM1-209ENST00000508940 TNP1P09430 55 aa8.93□□□□□ -0.98
PROM1-209ENST00000508940 C10orf95Q9H7T3 257 aa8.91□□□□□ -0.98
PROM1-209ENST00000508940 UQCR11O14957 56 aa8.87□□□□□ -0.99
PROM1-209ENST00000508940 MT1GP13640 62 aa8.8□□□□□ -1
PROM1-209ENST00000508940 LCE3AQ5TA76 89 aa8.79□□□□□ -1
PROM1-209ENST00000508940 PP632Q6XCG6 107 aa8.76□□□□□ -1.01
PROM1-209ENST00000508940 DSTQ03001 7570 aaKnown RBP8.72□□□□□ -1.01
PROM1-209ENST00000508940 MIR22HGQ0VDD5 57 aa8.67□□□□□ -1.02
PROM1-209ENST00000508940 MT1LQ93083 61 aa8.67□□□□□ -1.02
PROM1-209ENST00000508940 V9GYY9 64 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms