RNA–Protein interactions for RNA: ENST00000508538.1

CCDC110-207, Transcript of coiled-coil domain containing 110, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC110, Length 467 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC110-207ENST00000508538 DMXL2Q8TDJ6 3036 aa0.67□□□□□ -2.3
CCDC110-207ENST00000508538 H3BNG1 76 aa0.67□□□□□ -2.3
CCDC110-207ENST00000508538 DEFB1P60022 68 aa0.67□□□□□ -2.3
CCDC110-207ENST00000508538 ITPR1Q14643 2758 aa0.67□□□□□ -2.3
CCDC110-207ENST00000508538 USP24Q9UPU5 2620 aa0.67□□□□□ -2.3
CCDC110-207ENST00000508538 DMXL1Q9Y485 3027 aa0.66□□□□□ -2.3
CCDC110-207ENST00000508538 LRRK2Q5S007 2527 aa0.66□□□□□ -2.3
CCDC110-207ENST00000508538 RIF1Q5UIP0 2472 aaKnown RBP0.66□□□□□ -2.3
CCDC110-207ENST00000508538 DNAH12Q6ZR08 3092 aa0.66□□□□□ -2.3
CCDC110-207ENST00000508538 PDZD2O15018 2839 aa0.66□□□□□ -2.3
CCDC110-207ENST00000508538 VPS13AQ96RL7 3174 aa0.66□□□□□ -2.3
CCDC110-207ENST00000508538 GOLGB1Q14789 3259 aaKnown RBP0.66□□□□□ -2.3
CCDC110-207ENST00000508538 ITPR3Q14573 2671 aa0.66□□□□□ -2.3
CCDC110-207ENST00000508538 PLECQ15149 4684 aaKnown RBP0.66□□□□□ -2.3
CCDC110-207ENST00000508538 FLNCQ14315 2725 aa0.66□□□□□ -2.3
CCDC110-207ENST00000508538 HIVEP3Q5T1R4 2406 aa0.65□□□□□ -2.31
CCDC110-207ENST00000508538 MKI67P46013 3256 aaKnown RBP0.65□□□□□ -2.31
CCDC110-207ENST00000508538 RPS29P62273 56 aaKnown RBP0.65□□□□□ -2.31
CCDC110-207ENST00000508538 MAP1AP78559 2803 aaPredicted RBP0.65□□□□□ -2.31
CCDC110-207ENST00000508538 ZZEF1O43149 2961 aa0.65□□□□□ -2.31
CCDC110-207ENST00000508538 DNAH17Q9UFH2 4485 aa0.64□□□□□ -2.31
CCDC110-207ENST00000508538 USP9YO00507 2555 aaPredicted RBP0.64□□□□□ -2.31
CCDC110-207ENST00000508538 FREM2Q5SZK8 3169 aa0.64□□□□□ -2.31
CCDC110-207ENST00000508538 NCOR2Q9Y618 2525 aa0.64□□□□□ -2.31
CCDC110-207ENST00000508538 LRP1Q07954 4544 aaKnown RBP0.64□□□□□ -2.31
CCDC110-207ENST00000508538 APOBP04114 4563 aaKnown RBP0.64□□□□□ -2.31
CCDC110-207ENST00000508538 CSMD1Q96PZ7 3565 aa0.63□□□□□ -2.31
CCDC110-207ENST00000508538 WDFY4Q6ZS81 3184 aa0.63□□□□□ -2.31
CCDC110-207ENST00000508538 LINC01556Q5JQF7 62 aa0.63□□□□□ -2.31
CCDC110-207ENST00000508538 KRTAP8-1Q8IUC2 63 aa0.63□□□□□ -2.31
CCDC110-207ENST00000508538 NSD1Q96L73 2696 aaPredicted RBP0.63□□□□□ -2.31
CCDC110-207ENST00000508538 XIRP2A4UGR9 3374 aa0.63□□□□□ -2.31
CCDC110-207ENST00000508538 SPEGQ15772 3267 aa0.63□□□□□ -2.31
CCDC110-207ENST00000508538 KALRNO60229 2985 aa0.63□□□□□ -2.31
CCDC110-207ENST00000508538 SETXQ7Z333 2677 aaKnown RBP0.62□□□□□ -2.31
CCDC110-207ENST00000508538 CFAP47Q6ZTR5 3102 aa0.62□□□□□ -2.31
CCDC110-207ENST00000508538 TACC2O95359 2948 aa0.62□□□□□ -2.31
CCDC110-207ENST00000508538 DCHS1Q96JQ0 3298 aa0.62□□□□□ -2.31
CCDC110-207ENST00000508538 MUC3AQ02505 3323 aa0.62□□□□□ -2.31
CCDC110-207ENST00000508538 ACANP16112 2415 aa0.62□□□□□ -2.31
CCDC110-207ENST00000508538 HTN1P15515 57 aa0.62□□□□□ -2.31
CCDC110-207ENST00000508538 DEFB108BQ8NET1 73 aa0.62□□□□□ -2.31
CCDC110-207ENST00000508538 COL7A1Q02388 2944 aa0.62□□□□□ -2.31
CCDC110-207ENST00000508538 VPS13CQ709C8 3753 aa0.62□□□□□ -2.31
CCDC110-207ENST00000508538 UTRNP46939 3433 aa0.62□□□□□ -2.31
CCDC110-207ENST00000508538 CACNA1AO00555 2505 aa0.62□□□□□ -2.31
CCDC110-207ENST00000508538 SONP18583 2426 aaKnown RBP0.62□□□□□ -2.31
CCDC110-207ENST00000508538 USP34Q70CQ2 3546 aa0.61□□□□□ -2.31
CCDC110-207ENST00000508538 LAMA1P25391 3075 aa0.61□□□□□ -2.31
CCDC110-207ENST00000508538 LOC400499M0QZD8 3231 aa0.61□□□□□ -2.31
CCDC110-207ENST00000508538 ANKHD1Q8IWZ3 2542 aaKnown RBP0.61□□□□□ -2.31
CCDC110-207ENST00000508538 DEFB110Q30KQ9 67 aa0.61□□□□□ -2.31
CCDC110-207ENST00000508538 NIPBLQ6KC79 2804 aaeCLIP0.61□□□□□ -2.31
CCDC110-207ENST00000508538 UTP20O75691 2785 aaKnown RBP0.61□□□□□ -2.31
CCDC110-207ENST00000508538 SPG11Q96JI7 2443 aa0.6□□□□□ -2.31
CCDC110-207ENST00000508538 MACF1Q9UPN3 7388 aaKnown RBP0.6□□□□□ -2.31
CCDC110-207ENST00000508538 SYNE1Q8NF91 8797 aaKnown RBP0.6□□□□□ -2.31
CCDC110-207ENST00000508538 SPART-AS1P0CW21 52 aa0.6□□□□□ -2.31
CCDC110-207ENST00000508538 SPRR2BP35325 72 aa0.6□□□□□ -2.31
CCDC110-207ENST00000508538 DEFB136Q30KP8 78 aa0.6□□□□□ -2.31
CCDC110-207ENST00000508538 CUBNO60494 3623 aa0.6□□□□□ -2.31
CCDC110-207ENST00000508538 MTORP42345 2549 aa0.6□□□□□ -2.31
CCDC110-207ENST00000508538 LPAP08519 4548 aa0.59□□□□□ -2.31
CCDC110-207ENST00000508538 ZANQ9Y493 2812 aa0.59□□□□□ -2.31
CCDC110-207ENST00000508538 A0A096LPF7 62 aa0.59□□□□□ -2.31
CCDC110-207ENST00000508538 DYNC1H1Q14204 4646 aaKnown RBP0.59□□□□□ -2.31
CCDC110-207ENST00000508538 LAMA3Q16787 3333 aa0.59□□□□□ -2.32
CCDC110-207ENST00000508538 FAT1Q14517 4588 aa0.59□□□□□ -2.32
CCDC110-207ENST00000508538 CFAP46Q8IYW2 2715 aa0.58□□□□□ -2.32
CCDC110-207ENST00000508538 GCN1Q92616 2671 aaKnown RBP0.58□□□□□ -2.32
CCDC110-207ENST00000508538 HRNRQ86YZ3 2850 aaPredicted RBP0.58□□□□□ -2.32
CCDC110-207ENST00000508538 HIVEP1P15822 2718 aa0.58□□□□□ -2.32
CCDC110-207ENST00000508538 NBEAL2Q6ZNJ1 2754 aa0.58□□□□□ -2.32
CCDC110-207ENST00000508538 CENPEQ02224 2701 aa0.58□□□□□ -2.32
CCDC110-207ENST00000508538 LAMA2P24043 3122 aaKnown RBP0.58□□□□□ -2.32
CCDC110-207ENST00000508538 STAB1Q9NY15 2570 aa0.57□□□□□ -2.32
CCDC110-207ENST00000508538 MUC17Q685J3 4493 aa0.57□□□□□ -2.32
CCDC110-207ENST00000508538 CSMD2Q7Z408 3487 aa0.57□□□□□ -2.32
CCDC110-207ENST00000508538 ITPR2Q14571 2701 aa0.57□□□□□ -2.32
CCDC110-207ENST00000508538 TEX15Q9BXT5 2789 aa0.56□□□□□ -2.32
CCDC110-207ENST00000508538 A0A096LNI7 61 aa0.56□□□□□ -2.32
CCDC110-207ENST00000508538 SVEP1Q4LDE5 3571 aa0.56□□□□□ -2.32
CCDC110-207ENST00000508538 IGSF10Q6WRI0 2623 aa0.56□□□□□ -2.32
CCDC110-207ENST00000508538 ASPMQ8IZT6 3477 aa0.56□□□□□ -2.32
CCDC110-207ENST00000508538 ACACBO00763 2458 aa0.56□□□□□ -2.32
CCDC110-207ENST00000508538 TEP1Q99973 2627 aaKnown RBP0.55□□□□□ -2.32
CCDC110-207ENST00000508538 TGP01266 2768 aa0.55□□□□□ -2.32
CCDC110-207ENST00000508538 MDN1Q9NU22 5596 aa0.55□□□□□ -2.32
CCDC110-207ENST00000508538 EP400Q96L91 3159 aa0.55□□□□□ -2.32
CCDC110-207ENST00000508538 USP9XQ93008 2570 aaPredicted RBP0.55□□□□□ -2.32
CCDC110-207ENST00000508538 CENPFP49454 3210 aa0.55□□□□□ -2.32
CCDC110-207ENST00000508538 TLN2Q9Y4G6 2542 aa0.55□□□□□ -2.32
CCDC110-207ENST00000508538 ANKRD11Q6UB99 2663 aaPredicted RBP0.54□□□□□ -2.32
CCDC110-207ENST00000508538 MXRA5Q9NR99 2828 aa0.54□□□□□ -2.32
CCDC110-207ENST00000508538 PCNTO95613 3336 aa0.54□□□□□ -2.32
CCDC110-207ENST00000508538 DEFB133Q30KQ1 61 aa0.54□□□□□ -2.32
CCDC110-207ENST00000508538 FLNBO75369 2602 aaKnown RBP0.54□□□□□ -2.32
CCDC110-207ENST00000508538 LRP1BQ9NZR2 4599 aa0.54□□□□□ -2.32
CCDC110-207ENST00000508538 STARD9Q9P2P6 4700 aa0.54□□□□□ -2.32
CCDC110-207ENST00000508538 ADGRG4Q8IZF6 3080 aa0.53□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms