RNA–Protein interactions for RNA: ENST00000508473.5

SRPK1-210, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-210ENST00000508473 OCR1Q9BZK8 76 aa10.96□□□□□ -0.65
SRPK1-210ENST00000508473 MP68P56378 58 aa10.92□□□□□ -0.66
SRPK1-210ENST00000508473 KLKP1Q107X0 134 aa10.92□□□□□ -0.66
SRPK1-210ENST00000508473 NDUFC1O43677 76 aa10.84□□□□□ -0.67
SRPK1-210ENST00000508473 SPRR2GQ9BYE4 73 aa10.84□□□□□ -0.67
SRPK1-210ENST00000508473 A8MUN3 132 aa10.82□□□□□ -0.68
SRPK1-210ENST00000508473 MACF1Q9UPN3 7388 aaKnown RBP10.81□□□□□ -0.68
SRPK1-210ENST00000508473 SCGB1A1P11684 91 aa10.81□□□□□ -0.68
SRPK1-210ENST00000508473 MT1BP07438 61 aa10.79□□□□□ -0.68
SRPK1-210ENST00000508473 Q5VV11 94 aa10.78□□□□□ -0.68
SRPK1-210ENST00000508473 IMUPQ9GZP8 106 aa10.78□□□□□ -0.68
SRPK1-210ENST00000508473 SYNE2Q8WXH0 6885 aaKnown RBP10.78□□□□□ -0.68
SRPK1-210ENST00000508473 KRTAP19-8Q3LI54 63 aa10.77□□□□□ -0.69
SRPK1-210ENST00000508473 H3BPC8 53 aa10.73□□□□□ -0.69
SRPK1-210ENST00000508473 CRIPTQ9P021 101 aa10.68□□□□□ -0.7
SRPK1-210ENST00000508473 H0YAA0 97 aa10.67□□□□□ -0.7
SRPK1-210ENST00000508473 MT-ATP8P03928 68 aa10.67□□□□□ -0.7
SRPK1-210ENST00000508473 ADM2Q7Z4H4 148 aa10.64□□□□□ -0.71
SRPK1-210ENST00000508473 A6NN06 94 aa10.63□□□□□ -0.71
SRPK1-210ENST00000508473 K7ERU9 68 aa10.62□□□□□ -0.71
SRPK1-210ENST00000508473 KRTAP3-2Q9BYR7 98 aa10.59□□□□□ -0.71
SRPK1-210ENST00000508473 DMAC1Q96GE9 116 aa10.58□□□□□ -0.72
SRPK1-210ENST00000508473 KRTAP10-5P60370 271 aa10.5□□□□□ -0.73
SRPK1-210ENST00000508473 TRAV7A0A075B6U4 112 aa10.49□□□□□ -0.73
SRPK1-210ENST00000508473 KRTAP6-3Q3LI67 103 aa10.48□□□□□ -0.73
SRPK1-210ENST00000508473 SMIM20Q8N5G0 67 aa10.47□□□□□ -0.73
SRPK1-210ENST00000508473 P0C880 135 aa10.41□□□□□ -0.74
SRPK1-210ENST00000508473 ACYP2P14621 99 aa10.35□□□□□ -0.75
SRPK1-210ENST00000508473 C20orf197Q8N268 126 aa10.34□□□□□ -0.75
SRPK1-210ENST00000508473 R4GN34 69 aa10.33□□□□□ -0.76
SRPK1-210ENST00000508473 SNURFQ9Y675 71 aa10.32□□□□□ -0.76
SRPK1-210ENST00000508473 M0QZ58 72 aa10.28□□□□□ -0.76
SRPK1-210ENST00000508473 PLAC4Q8WY50 150 aa10.23□□□□□ -0.77
SRPK1-210ENST00000508473 CHKB-CPT1BH3BT56 60 aa10.19□□□□□ -0.78
SRPK1-210ENST00000508473 SPTSSBQ8NFR3 76 aa10.19□□□□□ -0.78
SRPK1-210ENST00000508473 SERP2Q8N6R1 65 aa10.17□□□□□ -0.78
SRPK1-210ENST00000508473 LINC01554Q52M75 96 aa10.16□□□□□ -0.78
SRPK1-210ENST00000508473 NEBP20929 6669 aa10.16□□□□□ -0.78
SRPK1-210ENST00000508473 MT1XP80297 61 aa10.14□□□□□ -0.79
SRPK1-210ENST00000508473 PRO2289Q9P1D8 64 aa10.14□□□□□ -0.79
SRPK1-210ENST00000508473 SPANXA2-OT1Q8N9U9 137 aa10.1□□□□□ -0.79
SRPK1-210ENST00000508473 MUC12Q9UKN1 5478 aa10.03□□□□□ -0.8
SRPK1-210ENST00000508473 KRTAP5-9P26371 169 aa9.98□□□□□ -0.81
SRPK1-210ENST00000508473 KRTAP20-1Q3LI63 56 aa9.97□□□□□ -0.81
SRPK1-210ENST00000508473 KMT2DO14686 5537 aa9.91□□□□□ -0.82
SRPK1-210ENST00000508473 COX7CP15954 63 aa9.88□□□□□ -0.83
SRPK1-210ENST00000508473 COA5Q86WW8 74 aa9.86□□□□□ -0.83
SRPK1-210ENST00000508473 KRTAP12-2P59991 146 aa9.83□□□□□ -0.84
SRPK1-210ENST00000508473 SPRR2FQ96RM1 72 aa9.78□□□□□ -0.84
SRPK1-210ENST00000508473 KRTAP13-4Q3LI77 160 aa9.77□□□□□ -0.85
SRPK1-210ENST00000508473 KRTAP8-1Q8IUC2 63 aa9.77□□□□□ -0.85
SRPK1-210ENST00000508473 CYSTM1Q9H1C7 97 aa9.76□□□□□ -0.85
SRPK1-210ENST00000508473 MDN1Q9NU22 5596 aa9.73□□□□□ -0.85
SRPK1-210ENST00000508473 H7BZZ5 65 aa9.72□□□□□ -0.85
SRPK1-210ENST00000508473 KRTAP10-7P60409 375 aaPredicted RBP9.71□□□□□ -0.86
SRPK1-210ENST00000508473 KRTAP4-8A0A0G2JLE6 195 aa9.7□□□□□ -0.86
SRPK1-210ENST00000508473 KRTAP4-8Q9BYQ9 185 aa9.7□□□□□ -0.86
SRPK1-210ENST00000508473 SEC61GP60059 68 aa9.64□□□□□ -0.87
SRPK1-210ENST00000508473 SERP1Q9Y6X1 66 aa9.62□□□□□ -0.87
SRPK1-210ENST00000508473 SPRR2EP22531 72 aa9.61□□□□□ -0.87
SRPK1-210ENST00000508473 SPRR2BP35325 72 aa9.61□□□□□ -0.87
SRPK1-210ENST00000508473 SPRR2AP35326 72 aa9.61□□□□□ -0.87
SRPK1-210ENST00000508473 KRTAP10-12P60413 245 aa9.61□□□□□ -0.87
SRPK1-210ENST00000508473 ANAPC13Q9BS18 74 aa9.6□□□□□ -0.87
SRPK1-210ENST00000508473 KRTAP2-3P0C7H8 128 aa9.57□□□□□ -0.88
SRPK1-210ENST00000508473 KRTAP2-4Q9BYR9 128 aa9.57□□□□□ -0.88
SRPK1-210ENST00000508473 CAMK2N1Q7Z7J9 78 aa9.54□□□□□ -0.88
SRPK1-210ENST00000508473 A0A0D9SG42 100 aa9.51□□□□□ -0.89
SRPK1-210ENST00000508473 SPATA8Q6RVD6 105 aa9.5□□□□□ -0.89
SRPK1-210ENST00000508473 LCE1AQ5T7P2 110 aa9.48□□□□□ -0.89
SRPK1-210ENST00000508473 A0A1B0GU33 70 aa9.47□□□□□ -0.89
SRPK1-210ENST00000508473 CCDC179H3BU77 68 aa9.43□□□□□ -0.9
SRPK1-210ENST00000508473 SPINT4Q6UDR6 99 aa9.36□□□□□ -0.91
SRPK1-210ENST00000508473 A0A1B0GU69 56 aa9.35□□□□□ -0.91
SRPK1-210ENST00000508473 SPRR2DP22532 72 aa9.28□□□□□ -0.92
SRPK1-210ENST00000508473 KRTAP12-1P59990 96 aa9.27□□□□□ -0.93
SRPK1-210ENST00000508473 KRTAP2-2Q9BYT5 123 aa9.23□□□□□ -0.93
SRPK1-210ENST00000508473 KRTAP2-1Q9BYU5 128 aa9.23□□□□□ -0.93
SRPK1-210ENST00000508473 ATP5EP56381 51 aaPredicted RBP9.21□□□□□ -0.94
SRPK1-210ENST00000508473 SMIM26A0A096LP01 95 aa9.18□□□□□ -0.94
SRPK1-210ENST00000508473 A8MU10 97 aa9.18□□□□□ -0.94
SRPK1-210ENST00000508473 PRR15LQ9BU68 103 aa9.08□□□□□ -0.96
SRPK1-210ENST00000508473 KRTAP19-7Q3SYF9 63 aa9.06□□□□□ -0.96
SRPK1-210ENST00000508473 TMEM258P61165 79 aa9.02□□□□□ -0.97
SRPK1-210ENST00000508473 LCE3BQ5TA77 95 aa9.02□□□□□ -0.97
SRPK1-210ENST00000508473 LINC01558Q9Y6Z2 57 aa9.02□□□□□ -0.97
SRPK1-210ENST00000508473 MT1EP04732 61 aa8.98□□□□□ -0.97
SRPK1-210ENST00000508473 KRTAP19-5Q3LI72 72 aa8.89□□□□□ -0.99
SRPK1-210ENST00000508473 C10orf95Q9H7T3 257 aa8.88□□□□□ -0.99
SRPK1-210ENST00000508473 LCE5AQ5TCM9 118 aa8.87□□□□□ -0.99
SRPK1-210ENST00000508473 KRTAP19-3Q7Z4W3 81 aa8.87□□□□□ -0.99
SRPK1-210ENST00000508473 TNP1P09430 55 aa8.8□□□□□ -1
SRPK1-210ENST00000508473 UQCR11O14957 56 aa8.77□□□□□ -1.01
SRPK1-210ENST00000508473 LCE3AQ5TA76 89 aa8.75□□□□□ -1.01
SRPK1-210ENST00000508473 MT1GP13640 62 aa8.66□□□□□ -1.02
SRPK1-210ENST00000508473 DSTQ03001 7570 aaKnown RBP8.62□□□□□ -1.03
SRPK1-210ENST00000508473 MIR22HGQ0VDD5 57 aa8.61□□□□□ -1.03
SRPK1-210ENST00000508473 MT1LQ93083 61 aa8.6□□□□□ -1.03
SRPK1-210ENST00000508473 SVIPQ8NHG7 77 aa8.59□□□□□ -1.03
SRPK1-210ENST00000508473 PP632Q6XCG6 107 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms