RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 DNAH10Q8IVF4 4471 aa3.55□□□□□ -1.84
PDGFRA-206ENST00000508170 TP53AIP1Q9HCN2 124 aa3.55□□□□□ -1.84
PDGFRA-206ENST00000508170 EPPK1P58107 5090 aaKnown RBP3.55□□□□□ -1.84
PDGFRA-206ENST00000508170 A0A096LNI7 61 aa3.55□□□□□ -1.84
PDGFRA-206ENST00000508170 KRTAP13-4Q3LI77 160 aa3.55□□□□□ -1.84
PDGFRA-206ENST00000508170 K7EIL1 84 aa3.54□□□□□ -1.84
PDGFRA-206ENST00000508170 TENM2Q9NT68 2774 aa3.53□□□□□ -1.84
PDGFRA-206ENST00000508170 DYNC2H1Q8NCM8 4307 aaKnown RBP3.53□□□□□ -1.84
PDGFRA-206ENST00000508170 LYSTQ99698 3801 aa3.53□□□□□ -1.84
PDGFRA-206ENST00000508170 DNAH9Q9NYC9 4486 aa3.52□□□□□ -1.85
PDGFRA-206ENST00000508170 SRRM2Q9UQ35 2752 aaKnown RBP3.52□□□□□ -1.85
PDGFRA-206ENST00000508170 LCE1AQ5T7P2 110 aa3.52□□□□□ -1.85
PDGFRA-206ENST00000508170 KRTAP1-5Q9BYS1 174 aa3.51□□□□□ -1.85
PDGFRA-206ENST00000508170 HYDINQ4G0P3 5121 aa3.5□□□□□ -1.85
PDGFRA-206ENST00000508170 KRTAP4-2Q9BYR5 136 aa3.5□□□□□ -1.85
PDGFRA-206ENST00000508170 RYR1P21817 5038 aa3.5□□□□□ -1.85
PDGFRA-206ENST00000508170 SPRR1BP22528 89 aa3.5□□□□□ -1.85
PDGFRA-206ENST00000508170 MRPL34Q9BQ48 92 aaKnown RBP3.5□□□□□ -1.85
PDGFRA-206ENST00000508170 UBR4Q5T4S7 5183 aa3.49□□□□□ -1.85
PDGFRA-206ENST00000508170 KRTAP4-9Q9BYQ8 210 aa3.49□□□□□ -1.85
PDGFRA-206ENST00000508170 DNAH7Q8WXX0 4024 aa3.48□□□□□ -1.85
PDGFRA-206ENST00000508170 CSMD3Q7Z407 3707 aa3.48□□□□□ -1.85
PDGFRA-206ENST00000508170 PLECQ15149 4684 aaKnown RBP3.48□□□□□ -1.85
PDGFRA-206ENST00000508170 APLNQ9ULZ1 77 aa3.48□□□□□ -1.85
PDGFRA-206ENST00000508170 KRTAP10-6P60371 365 aaPredicted RBP3.47□□□□□ -1.85
PDGFRA-206ENST00000508170 KRTAP10-1P60331 282 aa3.45□□□□□ -1.86
PDGFRA-206ENST00000508170 ALMS1Q8TCU4 4167 aa3.45□□□□□ -1.86
PDGFRA-206ENST00000508170 VPS13DQ5THJ4 4388 aa3.44□□□□□ -1.86
PDGFRA-206ENST00000508170 H0YAA0 97 aa3.44□□□□□ -1.86
PDGFRA-206ENST00000508170 HECTD4Q9Y4D8 3996 aa3.44□□□□□ -1.86
PDGFRA-206ENST00000508170 KRTAP13-1Q8IUC0 172 aa3.43□□□□□ -1.86
PDGFRA-206ENST00000508170 COX6B2Q6YFQ2 88 aa3.42□□□□□ -1.86
PDGFRA-206ENST00000508170 C10orf95Q9H7T3 257 aa3.42□□□□□ -1.86
PDGFRA-206ENST00000508170 SPINK6Q6UWN8 80 aa3.4□□□□□ -1.86
PDGFRA-206ENST00000508170 STARD9Q9P2P6 4700 aa3.4□□□□□ -1.86
PDGFRA-206ENST00000508170 A0A1B0GVY2 172 aa3.4□□□□□ -1.87
PDGFRA-206ENST00000508170 KRTAP9-3Q9BYQ3 159 aa3.4□□□□□ -1.87
PDGFRA-206ENST00000508170 DNAH17Q9UFH2 4485 aa3.39□□□□□ -1.87
PDGFRA-206ENST00000508170 RYR2Q92736 4967 aa3.39□□□□□ -1.87
PDGFRA-206ENST00000508170 KRTAP13-3Q3SY46 172 aa3.39□□□□□ -1.87
PDGFRA-206ENST00000508170 DNAH8Q96JB1 4490 aa3.38□□□□□ -1.87
PDGFRA-206ENST00000508170 DNAH2Q9P225 4427 aa3.38□□□□□ -1.87
PDGFRA-206ENST00000508170 HERC2O95714 4834 aa3.37□□□□□ -1.87
PDGFRA-206ENST00000508170 KMT2AQ03164 3969 aa3.35□□□□□ -1.87
PDGFRA-206ENST00000508170 KIAA1109Q2LD37 5005 aa3.35□□□□□ -1.87
PDGFRA-206ENST00000508170 FLG2Q5D862 2391 aaPredicted RBP3.35□□□□□ -1.87
PDGFRA-206ENST00000508170 KRTAP4-11Q9BYQ6 195 aa3.35□□□□□ -1.87
PDGFRA-206ENST00000508170 FRAS1Q86XX4 4008 aa3.35□□□□□ -1.87
PDGFRA-206ENST00000508170 Q6ZSA8 131 aa3.34□□□□□ -1.87
PDGFRA-206ENST00000508170 SPINK1P00995 79 aa3.31□□□□□ -1.88
PDGFRA-206ENST00000508170 DNAH6Q9C0G6 4158 aa3.3□□□□□ -1.88
PDGFRA-206ENST00000508170 LCE3CQ5T5A8 94 aa3.29□□□□□ -1.88
PDGFRA-206ENST00000508170 DNAH11Q96DT5 4516 aa3.29□□□□□ -1.88
PDGFRA-206ENST00000508170 SPRR5A0A1B0GTR4 108 aa3.29□□□□□ -1.88
PDGFRA-206ENST00000508170 DNAH5Q8TE73 4624 aa3.29□□□□□ -1.88
PDGFRA-206ENST00000508170 SACSQ9NZJ4 4579 aa3.29□□□□□ -1.88
PDGFRA-206ENST00000508170 KRTAP12-1P59990 96 aa3.26□□□□□ -1.89
PDGFRA-206ENST00000508170 LRP1BQ9NZR2 4599 aa3.24□□□□□ -1.89
PDGFRA-206ENST00000508170 PKD1P98161 4303 aa3.24□□□□□ -1.89
PDGFRA-206ENST00000508170 FAT2Q9NYQ8 4349 aa3.22□□□□□ -1.89
PDGFRA-206ENST00000508170 H1FX-AS1Q4G0G2 97 aa3.21□□□□□ -1.9
PDGFRA-206ENST00000508170 VPS13BQ7Z7G8 4022 aa3.21□□□□□ -1.9
PDGFRA-206ENST00000508170 PKHD1P08F94 4074 aa3.2□□□□□ -1.9
PDGFRA-206ENST00000508170 LCE1EQ5T753 118 aa3.17□□□□□ -1.9
PDGFRA-206ENST00000508170 HERC1Q15751 4861 aa3.16□□□□□ -1.9
PDGFRA-206ENST00000508170 KRTAP10-12P60413 245 aa3.16□□□□□ -1.9
PDGFRA-206ENST00000508170 ABCA13Q86UQ4 5058 aa3.13□□□□□ -1.91
PDGFRA-206ENST00000508170 KRTAP10-10P60014 251 aa3.12□□□□□ -1.91
PDGFRA-206ENST00000508170 DYNC1H1Q14204 4646 aaKnown RBP3.1□□□□□ -1.91
PDGFRA-206ENST00000508170 RPS29P62273 56 aaKnown RBP3.1□□□□□ -1.91
PDGFRA-206ENST00000508170 PKHD1L1Q86WI1 4243 aa3.08□□□□□ -1.92
PDGFRA-206ENST00000508170 KRTAP6-3Q3LI67 103 aa3.07□□□□□ -1.92
PDGFRA-206ENST00000508170 APOBP04114 4563 aaKnown RBP3.07□□□□□ -1.92
PDGFRA-206ENST00000508170 A0A0D9SG42 100 aa3.07□□□□□ -1.92
PDGFRA-206ENST00000508170 FAT1Q14517 4588 aa3.06□□□□□ -1.92
PDGFRA-206ENST00000508170 DMBT1Q9UGM3 2413 aaPredicted RBP3.05□□□□□ -1.92
PDGFRA-206ENST00000508170 C9orf92A6NGG3 77 aa3.05□□□□□ -1.92
PDGFRA-206ENST00000508170 MUC2Q02817 5179 aa3.04□□□□□ -1.92
PDGFRA-206ENST00000508170 LCE3EQ5T5B0 92 aa3.04□□□□□ -1.92
PDGFRA-206ENST00000508170 Q5VSD8 79 aa3.04□□□□□ -1.92
PDGFRA-206ENST00000508170 HSPG2P98160 4391 aa3.03□□□□□ -1.92
PDGFRA-206ENST00000508170 SMR3BP02814 79 aaPredicted RBP3.03□□□□□ -1.93
PDGFRA-206ENST00000508170 KRTAP10-4P60372 401 aaPredicted RBP3.03□□□□□ -1.93
PDGFRA-206ENST00000508170 KRTAP5-9P26371 169 aa3.02□□□□□ -1.93
PDGFRA-206ENST00000508170 KRTAP10-7P60409 375 aaPredicted RBP3□□□□□ -1.93
PDGFRA-206ENST00000508170 S4R3F8 94 aa2.97□□□□□ -1.93
PDGFRA-206ENST00000508170 FAT3Q8TDW7 4589 aa2.97□□□□□ -1.93
PDGFRA-206ENST00000508170 MYCBP2O75592 4640 aa2.97□□□□□ -1.93
PDGFRA-206ENST00000508170 LRP1Q07954 4544 aaKnown RBP2.96□□□□□ -1.94
PDGFRA-206ENST00000508170 TNXBP22105 4242 aa2.96□□□□□ -1.94
PDGFRA-206ENST00000508170 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.96□□□□□ -1.94
PDGFRA-206ENST00000508170 KRTAP12-4P60329 112 aa2.95□□□□□ -1.94
PDGFRA-206ENST00000508170 CRCT1Q9UGL9 99 aa2.92□□□□□ -1.94
PDGFRA-206ENST00000508170 FSIP2Q5CZC0 6907 aa2.87□□□□□ -1.95
PDGFRA-206ENST00000508170 FAT4Q6V0I7 4981 aa2.87□□□□□ -1.95
PDGFRA-206ENST00000508170 RNF213Q63HN8 5207 aa2.86□□□□□ -1.95
PDGFRA-206ENST00000508170 LCE3DQ9BYE3 92 aa2.83□□□□□ -1.96
PDGFRA-206ENST00000508170 MT1HL1P0DM35 61 aa2.82□□□□□ -1.96
PDGFRA-206ENST00000508170 M0QZ58 72 aa2.81□□□□□ -1.96
PDGFRA-206ENST00000508170 HMCN2Q8NDA2 5059 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms