RNA–Protein interactions for RNA: ENST00000508108.2

CBX3P3-201, Transcript of chromobox 3 pseudogene 3, humanhuman

BASIC

Gene CBX3P3, Length 532 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P3-201ENST00000508108 DMDP11532 3685 aa0.4□□□□□ -2.35
CBX3P3-201ENST00000508108 MGAQ8IWI9 3026 aa0.4□□□□□ -2.35
CBX3P3-201ENST00000508108 SMIM27A0A1W2PRY6 76 aa0.4□□□□□ -2.35
CBX3P3-201ENST00000508108 M0QY20 66 aa0.4□□□□□ -2.35
CBX3P3-201ENST00000508108 PLNP26678 52 aa0.4□□□□□ -2.35
CBX3P3-201ENST00000508108 ASPMQ8IZT6 3477 aa0.4□□□□□ -2.35
CBX3P3-201ENST00000508108 UBR5O95071 2799 aaPredicted RBP0.4□□□□□ -2.35
CBX3P3-201ENST00000508108 TENM2Q9NT68 2774 aa0.4□□□□□ -2.35
CBX3P3-201ENST00000508108 MYO15AQ9UKN7 3530 aa0.4□□□□□ -2.35
CBX3P3-201ENST00000508108 DMXL1Q9Y485 3027 aa0.4□□□□□ -2.35
CBX3P3-201ENST00000508108 CFAP47Q6ZTR5 3102 aa0.4□□□□□ -2.35
CBX3P3-201ENST00000508108 PKD1L1Q8TDX9 2849 aa0.39□□□□□ -2.35
CBX3P3-201ENST00000508108 FRYLO94915 3013 aa0.39□□□□□ -2.35
CBX3P3-201ENST00000508108 IGLV5-48A0A075B6I7 105 aa0.39□□□□□ -2.35
CBX3P3-201ENST00000508108 H3BNG1 76 aa0.39□□□□□ -2.35
CBX3P3-201ENST00000508108 POLR2KP53803 58 aaKnown RBP0.39□□□□□ -2.35
CBX3P3-201ENST00000508108 ZFHX4Q86UP3 3567 aa0.39□□□□□ -2.35
CBX3P3-201ENST00000508108 FLNCQ14315 2725 aa0.39□□□□□ -2.35
CBX3P3-201ENST00000508108 NBEAQ8NFP9 2946 aa0.39□□□□□ -2.35
CBX3P3-201ENST00000508108 GPR98Q8WXG9 6306 aa0.39□□□□□ -2.35
CBX3P3-201ENST00000508108 STAB2Q8WWQ8 2551 aa0.39□□□□□ -2.35
CBX3P3-201ENST00000508108 ITPR1Q14643 2758 aa0.39□□□□□ -2.35
CBX3P3-201ENST00000508108 KALRNO60229 2985 aa0.39□□□□□ -2.35
CBX3P3-201ENST00000508108 NIPBLQ6KC79 2804 aaeCLIP0.38□□□□□ -2.35
CBX3P3-201ENST00000508108 CSMD1Q96PZ7 3565 aa0.38□□□□□ -2.35
CBX3P3-201ENST00000508108 SPEGQ15772 3267 aa0.38□□□□□ -2.35
CBX3P3-201ENST00000508108 VPS13AQ96RL7 3174 aa0.38□□□□□ -2.35
CBX3P3-201ENST00000508108 S4R3F8 94 aa0.38□□□□□ -2.35
CBX3P3-201ENST00000508108 CELSR3Q9NYQ7 3312 aa0.38□□□□□ -2.35
CBX3P3-201ENST00000508108 SPENQ96T58 3664 aaKnown RBP0.38□□□□□ -2.35
CBX3P3-201ENST00000508108 LRBAP50851 2863 aa0.38□□□□□ -2.35
CBX3P3-201ENST00000508108 PRRC2CQ9Y520 2896 aaKnown RBP0.38□□□□□ -2.35
CBX3P3-201ENST00000508108 NSD1Q96L73 2696 aaPredicted RBP0.38□□□□□ -2.35
CBX3P3-201ENST00000508108 WDFY3Q8IZQ1 3526 aa0.38□□□□□ -2.35
CBX3P3-201ENST00000508108 DMXL2Q8TDJ6 3036 aa0.38□□□□□ -2.35
CBX3P3-201ENST00000508108 MAP1AP78559 2803 aaPredicted RBP0.37□□□□□ -2.35
CBX3P3-201ENST00000508108 FREM2Q5SZK8 3169 aa0.37□□□□□ -2.35
CBX3P3-201ENST00000508108 TRIOO75962 3097 aa0.37□□□□□ -2.35
CBX3P3-201ENST00000508108 PDZD2O15018 2839 aa0.37□□□□□ -2.35
CBX3P3-201ENST00000508108 NF1P21359 2839 aa0.37□□□□□ -2.35
CBX3P3-201ENST00000508108 M0QZ58 72 aa0.37□□□□□ -2.35
CBX3P3-201ENST00000508108 LINC00308Q8TCZ7 52 aa0.37□□□□□ -2.35
CBX3P3-201ENST00000508108 COL12A1Q99715 3063 aa0.37□□□□□ -2.35
CBX3P3-201ENST00000508108 DMBT1Q9UGM3 2413 aaPredicted RBP0.37□□□□□ -2.35
CBX3P3-201ENST00000508108 LAMA5O15230 3695 aa0.37□□□□□ -2.35
CBX3P3-201ENST00000508108 SMG1Q96Q15 3661 aaKnown RBP0.37□□□□□ -2.35
CBX3P3-201ENST00000508108 TGP01266 2768 aa0.37□□□□□ -2.35
CBX3P3-201ENST00000508108 NBEAL2Q6ZNJ1 2754 aa0.37□□□□□ -2.35
CBX3P3-201ENST00000508108 AKAP9Q99996 3911 aa0.37□□□□□ -2.35
CBX3P3-201ENST00000508108 TACC2O95359 2948 aa0.37□□□□□ -2.35
CBX3P3-201ENST00000508108 LAMA1P25391 3075 aa0.36□□□□□ -2.35
CBX3P3-201ENST00000508108 ADGRG4Q8IZF6 3080 aa0.36□□□□□ -2.35
CBX3P3-201ENST00000508108 ALMS1Q8TCU4 4167 aa0.36□□□□□ -2.35
CBX3P3-201ENST00000508108 CELSR1Q9NYQ6 3014 aa0.36□□□□□ -2.35
CBX3P3-201ENST00000508108 ATMQ13315 3056 aa0.36□□□□□ -2.35
CBX3P3-201ENST00000508108 H0YGX0 51 aa0.36□□□□□ -2.35
CBX3P3-201ENST00000508108 TNXBP22105 4242 aa0.36□□□□□ -2.35
CBX3P3-201ENST00000508108 SYNE1Q8NF91 8797 aaKnown RBP0.36□□□□□ -2.35
CBX3P3-201ENST00000508108 BSNQ9UPA5 3926 aa0.36□□□□□ -2.35
CBX3P3-201ENST00000508108 BOD1L1Q8NFC6 3051 aa0.36□□□□□ -2.35
CBX3P3-201ENST00000508108 MDN1Q9NU22 5596 aa0.35□□□□□ -2.35
CBX3P3-201ENST00000508108 DCHS1Q96JQ0 3298 aa0.35□□□□□ -2.35
CBX3P3-201ENST00000508108 DCHS2Q6V1P9 2916 aa0.35□□□□□ -2.35
CBX3P3-201ENST00000508108 RELNP78509 3460 aa0.35□□□□□ -2.35
CBX3P3-201ENST00000508108 CSMD2Q7Z408 3487 aa0.35□□□□□ -2.35
CBX3P3-201ENST00000508108 MXRA5Q9NR99 2828 aa0.35□□□□□ -2.35
CBX3P3-201ENST00000508108 LOC400499M0QZD8 3231 aa0.35□□□□□ -2.35
CBX3P3-201ENST00000508108 HRNRQ86YZ3 2850 aaPredicted RBP0.35□□□□□ -2.35
CBX3P3-201ENST00000508108 IGIPA6NJ69 53 aa0.35□□□□□ -2.35
CBX3P3-201ENST00000508108 PHGR1C9JFL3 82 aa0.35□□□□□ -2.35
CBX3P3-201ENST00000508108 SPRR2EP22531 72 aa0.35□□□□□ -2.35
CBX3P3-201ENST00000508108 SPRR2BP35325 72 aa0.35□□□□□ -2.35
CBX3P3-201ENST00000508108 SPRR2AP35326 72 aa0.35□□□□□ -2.35
CBX3P3-201ENST00000508108 CUBNO60494 3623 aa0.35□□□□□ -2.35
CBX3P3-201ENST00000508108 VPS13CQ709C8 3753 aa0.35□□□□□ -2.35
CBX3P3-201ENST00000508108 ZANQ9Y493 2812 aa0.35□□□□□ -2.35
CBX3P3-201ENST00000508108 HECTD4Q9Y4D8 3996 aa0.34□□□□□ -2.35
CBX3P3-201ENST00000508108 ZZEF1O43149 2961 aa0.34□□□□□ -2.35
CBX3P3-201ENST00000508108 DNHD1Q96M86 4753 aa0.34□□□□□ -2.35
CBX3P3-201ENST00000508108 LRP1Q07954 4544 aaKnown RBP0.34□□□□□ -2.35
CBX3P3-201ENST00000508108 LINC01546A6NGU7 62 aa0.34□□□□□ -2.36
CBX3P3-201ENST00000508108 MT1HL1P0DM35 61 aa0.34□□□□□ -2.36
CBX3P3-201ENST00000508108 KRTAP20-1Q3LI63 56 aa0.34□□□□□ -2.36
CBX3P3-201ENST00000508108 SPRR2FQ96RM1 72 aa0.34□□□□□ -2.36
CBX3P3-201ENST00000508108 KMT2DO14686 5537 aa0.34□□□□□ -2.36
CBX3P3-201ENST00000508108 TRRAPQ9Y4A5 3859 aa0.34□□□□□ -2.36
CBX3P3-201ENST00000508108 BIRC6Q9NR09 4857 aa0.33□□□□□ -2.36
CBX3P3-201ENST00000508108 COL7A1Q02388 2944 aa0.33□□□□□ -2.36
CBX3P3-201ENST00000508108 RPS29P62273 56 aaKnown RBP0.33□□□□□ -2.36
CBX3P3-201ENST00000508108 KRTAP8-1Q8IUC2 63 aa0.33□□□□□ -2.36
CBX3P3-201ENST00000508108 CMYA5Q8N3K9 4069 aa0.33□□□□□ -2.36
CBX3P3-201ENST00000508108 MUC3AQ02505 3323 aa0.33□□□□□ -2.36
CBX3P3-201ENST00000508108 ANK3Q12955 4377 aaKnown RBP0.32□□□□□ -2.36
CBX3P3-201ENST00000508108 MT4P47944 62 aa0.32□□□□□ -2.36
CBX3P3-201ENST00000508108 MT1HP80294 61 aa0.32□□□□□ -2.36
CBX3P3-201ENST00000508108 RYR3Q15413 4870 aa0.32□□□□□ -2.36
CBX3P3-201ENST00000508108 RYR1P21817 5038 aa0.31□□□□□ -2.36
CBX3P3-201ENST00000508108 SVEP1Q4LDE5 3571 aa0.31□□□□□ -2.36
CBX3P3-201ENST00000508108 MMP24-AS1A0A0U1RRL7 71 aa0.31□□□□□ -2.36
CBX3P3-201ENST00000508108 DNAH3Q8TD57 4116 aa0.31□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms