RNA–Protein interactions for RNA: ENST00000507469.5

SMG7-212, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMG7, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-212ENST00000507469 FRAS1Q86XX4 4008 aa5.88□□□□□ -1.47
SMG7-212ENST00000507469 HECTD4Q9Y4D8 3996 aa5.86□□□□□ -1.47
SMG7-212ENST00000507469 KRTAP10-6P60371 365 aaPredicted RBP5.84□□□□□ -1.47
SMG7-212ENST00000507469 KRTAP13-4Q3LI77 160 aa5.81□□□□□ -1.48
SMG7-212ENST00000507469 M0R2T5 61 aa5.8□□□□□ -1.48
SMG7-212ENST00000507469 DNAH6Q9C0G6 4158 aa5.79□□□□□ -1.48
SMG7-212ENST00000507469 KRTAP3-3Q9BYR6 98 aa5.79□□□□□ -1.48
SMG7-212ENST00000507469 KRTAP12-2P59991 146 aa5.78□□□□□ -1.48
SMG7-212ENST00000507469 LUZP6Q538Z0 58 aa5.78□□□□□ -1.48
SMG7-212ENST00000507469 VPS13BQ7Z7G8 4022 aa5.76□□□□□ -1.49
SMG7-212ENST00000507469 FAT1Q14517 4588 aa5.75□□□□□ -1.49
SMG7-212ENST00000507469 MT1HL1P0DM35 61 aa5.75□□□□□ -1.49
SMG7-212ENST00000507469 DYNC1H1Q14204 4646 aaKnown RBP5.75□□□□□ -1.49
SMG7-212ENST00000507469 KRTAP3-2Q9BYR7 98 aa5.74□□□□□ -1.49
SMG7-212ENST00000507469 KRTAP12-1P59990 96 aa5.72□□□□□ -1.49
SMG7-212ENST00000507469 NDUFAF8A1L188 74 aa5.71□□□□□ -1.5
SMG7-212ENST00000507469 SACSQ9NZJ4 4579 aa5.68□□□□□ -1.5
SMG7-212ENST00000507469 FAT2Q9NYQ8 4349 aa5.63□□□□□ -1.51
SMG7-212ENST00000507469 PLAC4Q8WY50 150 aa5.63□□□□□ -1.51
SMG7-212ENST00000507469 HYDINQ4G0P3 5121 aa5.61□□□□□ -1.51
SMG7-212ENST00000507469 TNP1P09430 55 aa5.56□□□□□ -1.52
SMG7-212ENST00000507469 PP632Q6XCG6 107 aa5.55□□□□□ -1.52
SMG7-212ENST00000507469 MYCBP2O75592 4640 aa5.53□□□□□ -1.52
SMG7-212ENST00000507469 KRTAP4-5Q9BYR2 181 aa5.52□□□□□ -1.53
SMG7-212ENST00000507469 PKHD1P08F94 4074 aa5.52□□□□□ -1.53
SMG7-212ENST00000507469 PKD1P98161 4303 aa5.51□□□□□ -1.53
SMG7-212ENST00000507469 A0A0A0MQY5 61 aa5.47□□□□□ -1.53
SMG7-212ENST00000507469 APOBP04114 4563 aaKnown RBP5.47□□□□□ -1.53
SMG7-212ENST00000507469 LRP1Q07954 4544 aaKnown RBP5.44□□□□□ -1.54
SMG7-212ENST00000507469 KMT2CQ8NEZ4 4911 aaKnown RBP5.39□□□□□ -1.55
SMG7-212ENST00000507469 RYR2Q92736 4967 aa5.36□□□□□ -1.55
SMG7-212ENST00000507469 RYR1P21817 5038 aa5.36□□□□□ -1.55
SMG7-212ENST00000507469 FAT3Q8TDW7 4589 aa5.36□□□□□ -1.55
SMG7-212ENST00000507469 KRTAP17-1Q9BYP8 105 aa5.35□□□□□ -1.55
SMG7-212ENST00000507469 KIAA1109Q2LD37 5005 aa5.35□□□□□ -1.55
SMG7-212ENST00000507469 KRTAP15-1Q3LI76 137 aa5.35□□□□□ -1.55
SMG7-212ENST00000507469 LORP23490 312 aaPredicted RBP5.34□□□□□ -1.55
SMG7-212ENST00000507469 KRTAP10-10P60014 251 aa5.34□□□□□ -1.56
SMG7-212ENST00000507469 RYR3Q15413 4870 aa5.31□□□□□ -1.56
SMG7-212ENST00000507469 KRTAP4-1Q9BYQ7 146 aa5.27□□□□□ -1.57
SMG7-212ENST00000507469 PKHD1L1Q86WI1 4243 aa5.26□□□□□ -1.57
SMG7-212ENST00000507469 HSPG2P98160 4391 aa5.24□□□□□ -1.57
SMG7-212ENST00000507469 LRP2P98164 4655 aa5.16□□□□□ -1.58
SMG7-212ENST00000507469 TNXBP22105 4242 aa5.15□□□□□ -1.58
SMG7-212ENST00000507469 EPPK1P58107 5090 aaKnown RBP5.13□□□□□ -1.59
SMG7-212ENST00000507469 PRO2289Q9P1D8 64 aa5.05□□□□□ -1.6
SMG7-212ENST00000507469 LPAP08519 4548 aa5.02□□□□□ -1.61
SMG7-212ENST00000507469 KRTAP23-1A1A580 65 aa5□□□□□ -1.61
SMG7-212ENST00000507469 BIRC6Q9NR09 4857 aa4.99□□□□□ -1.61
SMG7-212ENST00000507469 HERC2O95714 4834 aa4.94□□□□□ -1.62
SMG7-212ENST00000507469 LCE3AQ5TA76 89 aa4.9□□□□□ -1.62
SMG7-212ENST00000507469 SPRR2GQ9BYE4 73 aa4.88□□□□□ -1.63
SMG7-212ENST00000507469 MT1HP80294 61 aa4.87□□□□□ -1.63
SMG7-212ENST00000507469 KRTAP10-12P60413 245 aa4.85□□□□□ -1.63
SMG7-212ENST00000507469 MT2AP02795 61 aa4.82□□□□□ -1.64
SMG7-212ENST00000507469 KRTAP19-2Q3LHN2 52 aa4.82□□□□□ -1.64
SMG7-212ENST00000507469 ABCA13Q86UQ4 5058 aa4.8□□□□□ -1.64
SMG7-212ENST00000507469 MUC2Q02817 5179 aa4.8□□□□□ -1.64
SMG7-212ENST00000507469 KRTAP12-3P60328 96 aa4.79□□□□□ -1.64
SMG7-212ENST00000507469 MT1FP04733 61 aa4.79□□□□□ -1.64
SMG7-212ENST00000507469 PCLOQ9Y6V0 5065 aa4.78□□□□□ -1.64
SMG7-212ENST00000507469 KRTAP19-1Q8IUB9 90 aa4.76□□□□□ -1.65
SMG7-212ENST00000507469 LCE2CQ5TA81 110 aa4.71□□□□□ -1.65
SMG7-212ENST00000507469 MUC17Q685J3 4493 aa4.69□□□□□ -1.66
SMG7-212ENST00000507469 FLGP20930 4061 aaPredicted RBP4.67□□□□□ -1.66
SMG7-212ENST00000507469 HERC1Q15751 4861 aa4.66□□□□□ -1.66
SMG7-212ENST00000507469 RNF213Q63HN8 5207 aa4.62□□□□□ -1.67
SMG7-212ENST00000507469 KRTAP19-8Q3LI54 63 aa4.61□□□□□ -1.67
SMG7-212ENST00000507469 KRTAP8-1Q8IUC2 63 aa4.61□□□□□ -1.67
SMG7-212ENST00000507469 FAT4Q6V0I7 4981 aa4.6□□□□□ -1.67
SMG7-212ENST00000507469 KRTAP9-8Q9BYQ0 159 aa4.59□□□□□ -1.67
SMG7-212ENST00000507469 INE1O15225 51 aa4.57□□□□□ -1.68
SMG7-212ENST00000507469 MT1BP07438 61 aa4.53□□□□□ -1.68
SMG7-212ENST00000507469 SPRR5A0A1B0GTR4 108 aa4.53□□□□□ -1.68
SMG7-212ENST00000507469 MT1XP80297 61 aa4.53□□□□□ -1.68
SMG7-212ENST00000507469 KRTAP10-5P60370 271 aa4.52□□□□□ -1.69
SMG7-212ENST00000507469 KRTAP10-7P60409 375 aaPredicted RBP4.49□□□□□ -1.69
SMG7-212ENST00000507469 KRTAP19-5Q3LI72 72 aa4.44□□□□□ -1.7
SMG7-212ENST00000507469 UBR4Q5T4S7 5183 aa4.44□□□□□ -1.7
SMG7-212ENST00000507469 FSIP2Q5CZC0 6907 aa4.43□□□□□ -1.7
SMG7-212ENST00000507469 KRTAP9-3Q9BYQ3 159 aa4.42□□□□□ -1.7
SMG7-212ENST00000507469 HMCN2Q8NDA2 5059 aa4.42□□□□□ -1.7
SMG7-212ENST00000507469 LCE3CQ5T5A8 94 aa4.36□□□□□ -1.71
SMG7-212ENST00000507469 CRCT1Q9UGL9 99 aa4.27□□□□□ -1.73
SMG7-212ENST00000507469 OBSCNQ5VST9 7968 aa4.25□□□□□ -1.73
SMG7-212ENST00000507469 LCE2BO14633 110 aa4.24□□□□□ -1.73
SMG7-212ENST00000507469 KRTAP4-8A0A0G2JLE6 195 aa4.24□□□□□ -1.73
SMG7-212ENST00000507469 KRTAP4-8Q9BYQ9 185 aa4.24□□□□□ -1.73
SMG7-212ENST00000507469 USH2AO75445 5202 aa4.18□□□□□ -1.74
SMG7-212ENST00000507469 KRTAP19-4Q3LI73 84 aa4.15□□□□□ -1.75
SMG7-212ENST00000507469 KMT2DO14686 5537 aa4.08□□□□□ -1.76
SMG7-212ENST00000507469 KRTAP4-7Q9BYR0 210 aa4.04□□□□□ -1.76
SMG7-212ENST00000507469 SYNE1Q8NF91 8797 aaKnown RBP4.04□□□□□ -1.76
SMG7-212ENST00000507469 LCE2AQ5TA79 106 aaPredicted RBP4.03□□□□□ -1.76
SMG7-212ENST00000507469 DSTQ03001 7570 aaKnown RBP4□□□□□ -1.77
SMG7-212ENST00000507469 MT1LQ93083 61 aa3.99□□□□□ -1.77
SMG7-212ENST00000507469 SPRR2FQ96RM1 72 aa3.98□□□□□ -1.77
SMG7-212ENST00000507469 MT1EP04732 61 aa3.97□□□□□ -1.77
SMG7-212ENST00000507469 KRTAP19-7Q3SYF9 63 aa3.95□□□□□ -1.78
SMG7-212ENST00000507469 MT1GP13640 62 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 192.3 ms