RNA–Protein interactions for RNA: ENST00000506714.5

HERC6-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 2

Gene HERC6, Length 2,293 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-206ENST00000506714 FAT1Q14517 4588 aa7.96□□□□□ -1.13
HERC6-206ENST00000506714 K7ERS5 55 aa7.94□□□□□ -1.14
HERC6-206ENST00000506714 Q5VSD8 79 aa7.92□□□□□ -1.14
HERC6-206ENST00000506714 KRTAP25-1Q3LHN0 102 aa7.92□□□□□ -1.14
HERC6-206ENST00000506714 PKHD1L1Q86WI1 4243 aa7.9□□□□□ -1.14
HERC6-206ENST00000506714 HSPG2P98160 4391 aa7.86□□□□□ -1.15
HERC6-206ENST00000506714 RYR1P21817 5038 aa7.8□□□□□ -1.16
HERC6-206ENST00000506714 FLG2Q5D862 2391 aaPredicted RBP7.79□□□□□ -1.16
HERC6-206ENST00000506714 EPPK1P58107 5090 aaKnown RBP7.78□□□□□ -1.16
HERC6-206ENST00000506714 KIAA1109Q2LD37 5005 aa7.77□□□□□ -1.16
HERC6-206ENST00000506714 KRTAP17-1Q9BYP8 105 aa7.77□□□□□ -1.17
HERC6-206ENST00000506714 RPL37P61927 97 aaKnown RBP7.75□□□□□ -1.17
HERC6-206ENST00000506714 KRTAP10-6P60371 365 aaPredicted RBP7.74□□□□□ -1.17
HERC6-206ENST00000506714 ROMO1P60602 79 aa7.73□□□□□ -1.17
HERC6-206ENST00000506714 KRTAP10-8P60410 259 aa7.69□□□□□ -1.18
HERC6-206ENST00000506714 LRP1Q07954 4544 aaKnown RBP7.69□□□□□ -1.18
HERC6-206ENST00000506714 S4R3F8 94 aa7.68□□□□□ -1.18
HERC6-206ENST00000506714 LCE2CQ5TA81 110 aa7.68□□□□□ -1.18
HERC6-206ENST00000506714 LCE2AQ5TA79 106 aaPredicted RBP7.67□□□□□ -1.18
HERC6-206ENST00000506714 KRTAP23-1A1A580 65 aa7.66□□□□□ -1.18
HERC6-206ENST00000506714 KRTAP13-4Q3LI77 160 aa7.64□□□□□ -1.19
HERC6-206ENST00000506714 CRIPTQ9P021 101 aa7.64□□□□□ -1.19
HERC6-206ENST00000506714 XP32Q5T750 250 aa7.63□□□□□ -1.19
HERC6-206ENST00000506714 FAT3Q8TDW7 4589 aa7.63□□□□□ -1.19
HERC6-206ENST00000506714 TNXBP22105 4242 aa7.62□□□□□ -1.19
HERC6-206ENST00000506714 DMBT1Q9UGM3 2413 aaPredicted RBP7.62□□□□□ -1.19
HERC6-206ENST00000506714 A0A0D9SG42 100 aa7.61□□□□□ -1.19
HERC6-206ENST00000506714 MYCBP2O75592 4640 aa7.59□□□□□ -1.19
HERC6-206ENST00000506714 MT1HL1P0DM35 61 aa7.58□□□□□ -1.2
HERC6-206ENST00000506714 KRTAP4-5Q9BYR2 181 aa7.57□□□□□ -1.2
HERC6-206ENST00000506714 LCE2BO14633 110 aa7.56□□□□□ -1.2
HERC6-206ENST00000506714 P0C880 135 aa7.54□□□□□ -1.2
HERC6-206ENST00000506714 TPRXLQ17RH7 258 aa7.49□□□□□ -1.21
HERC6-206ENST00000506714 KRTAP12-2P59991 146 aa7.43□□□□□ -1.22
HERC6-206ENST00000506714 BIRC6Q9NR09 4857 aa7.41□□□□□ -1.22
HERC6-206ENST00000506714 M0QZ58 72 aa7.41□□□□□ -1.22
HERC6-206ENST00000506714 SPINT4Q6UDR6 99 aa7.4□□□□□ -1.22
HERC6-206ENST00000506714 KRTAP12-1P59990 96 aa7.4□□□□□ -1.23
HERC6-206ENST00000506714 C10orf95Q9H7T3 257 aa7.37□□□□□ -1.23
HERC6-206ENST00000506714 ABCA13Q86UQ4 5058 aa7.37□□□□□ -1.23
HERC6-206ENST00000506714 HERC2O95714 4834 aa7.34□□□□□ -1.23
HERC6-206ENST00000506714 KRTAP15-1Q3LI76 137 aa7.25□□□□□ -1.25
HERC6-206ENST00000506714 LORP23490 312 aaPredicted RBP7.22□□□□□ -1.25
HERC6-206ENST00000506714 LPAP08519 4548 aa7.16□□□□□ -1.26
HERC6-206ENST00000506714 R4GN34 69 aa7.14□□□□□ -1.27
HERC6-206ENST00000506714 LRP2P98164 4655 aa7.13□□□□□ -1.27
HERC6-206ENST00000506714 PCLOQ9Y6V0 5065 aa7.12□□□□□ -1.27
HERC6-206ENST00000506714 NDUFAF8A1L188 74 aa7.08□□□□□ -1.28
HERC6-206ENST00000506714 HERC1Q15751 4861 aa6.96□□□□□ -1.3
HERC6-206ENST00000506714 PLAC4Q8WY50 150 aa6.88□□□□□ -1.31
HERC6-206ENST00000506714 KRTAP4-1Q9BYQ7 146 aa6.88□□□□□ -1.31
HERC6-206ENST00000506714 MUC17Q685J3 4493 aa6.88□□□□□ -1.31
HERC6-206ENST00000506714 PP632Q6XCG6 107 aa6.85□□□□□ -1.31
HERC6-206ENST00000506714 HMCN2Q8NDA2 5059 aa6.85□□□□□ -1.31
HERC6-206ENST00000506714 LUZP6Q538Z0 58 aa6.83□□□□□ -1.32
HERC6-206ENST00000506714 CAMK2N1Q7Z7J9 78 aa6.8□□□□□ -1.32
HERC6-206ENST00000506714 KRTAP19-2Q3LHN2 52 aa6.79□□□□□ -1.32
HERC6-206ENST00000506714 MUC2Q02817 5179 aa6.71□□□□□ -1.34
HERC6-206ENST00000506714 TNP1P09430 55 aa6.6□□□□□ -1.35
HERC6-206ENST00000506714 UBR4Q5T4S7 5183 aa6.59□□□□□ -1.35
HERC6-206ENST00000506714 FLGP20930 4061 aaPredicted RBP6.52□□□□□ -1.37
HERC6-206ENST00000506714 RNF213Q63HN8 5207 aa6.5□□□□□ -1.37
HERC6-206ENST00000506714 FAT4Q6V0I7 4981 aa6.43□□□□□ -1.38
HERC6-206ENST00000506714 M0R2T5 61 aa6.41□□□□□ -1.38
HERC6-206ENST00000506714 SPRR5A0A1B0GTR4 108 aa6.4□□□□□ -1.38
HERC6-206ENST00000506714 MT1HP80294 61 aa6.39□□□□□ -1.39
HERC6-206ENST00000506714 SPRR2GQ9BYE4 73 aa6.37□□□□□ -1.39
HERC6-206ENST00000506714 KRTAP19-1Q8IUB9 90 aa6.28□□□□□ -1.4
HERC6-206ENST00000506714 MT2AP02795 61 aa6.15□□□□□ -1.42
HERC6-206ENST00000506714 LCE3AQ5TA76 89 aa6.15□□□□□ -1.42
HERC6-206ENST00000506714 KRTAP9-8Q9BYQ0 159 aa6.15□□□□□ -1.43
HERC6-206ENST00000506714 KRTAP10-10P60014 251 aa6.14□□□□□ -1.43
HERC6-206ENST00000506714 MT1FP04733 61 aa6.13□□□□□ -1.43
HERC6-206ENST00000506714 KRTAP19-8Q3LI54 63 aa6.06□□□□□ -1.44
HERC6-206ENST00000506714 KRTAP8-1Q8IUC2 63 aa6.06□□□□□ -1.44
HERC6-206ENST00000506714 KRTAP10-5P60370 271 aa5.95□□□□□ -1.46
HERC6-206ENST00000506714 MT1BP07438 61 aa5.93□□□□□ -1.46
HERC6-206ENST00000506714 MT1XP80297 61 aa5.92□□□□□ -1.46
HERC6-206ENST00000506714 KRTAP9-3Q9BYQ3 159 aa5.92□□□□□ -1.46
HERC6-206ENST00000506714 KRTAP12-3P60328 96 aa5.89□□□□□ -1.47
HERC6-206ENST00000506714 KRTAP10-12P60413 245 aa5.89□□□□□ -1.47
HERC6-206ENST00000506714 INE1O15225 51 aa5.81□□□□□ -1.48
HERC6-206ENST00000506714 PRO2289Q9P1D8 64 aa5.81□□□□□ -1.48
HERC6-206ENST00000506714 KRTAP10-7P60409 375 aaPredicted RBP5.75□□□□□ -1.49
HERC6-206ENST00000506714 KRTAP19-4Q3LI73 84 aa5.69□□□□□ -1.5
HERC6-206ENST00000506714 USH2AO75445 5202 aa5.57□□□□□ -1.52
HERC6-206ENST00000506714 KRTAP19-5Q3LI72 72 aa5.56□□□□□ -1.52
HERC6-206ENST00000506714 LCE3CQ5T5A8 94 aa5.56□□□□□ -1.52
HERC6-206ENST00000506714 LCE5AQ5TCM9 118 aa5.53□□□□□ -1.52
HERC6-206ENST00000506714 KRTAP9-2Q9BYQ4 174 aa5.49□□□□□ -1.53
HERC6-206ENST00000506714 FSIP2Q5CZC0 6907 aa5.49□□□□□ -1.53
HERC6-206ENST00000506714 KRTAP9-4Q9BYQ2 154 aa5.45□□□□□ -1.54
HERC6-206ENST00000506714 SSPOA2VEC9 5147 aa5.37□□□□□ -1.55
HERC6-206ENST00000506714 KRTAP9-6A0A140TA67 174 aa5.36□□□□□ -1.55
HERC6-206ENST00000506714 KRTAP19-6Q3LI70 58 aa5.35□□□□□ -1.55
HERC6-206ENST00000506714 KRTAP4-8A0A0G2JLE6 195 aa5.33□□□□□ -1.56
HERC6-206ENST00000506714 KRTAP4-8Q9BYQ9 185 aa5.33□□□□□ -1.56
HERC6-206ENST00000506714 KRTAP9-6A8MVA2 160 aa5.3□□□□□ -1.56
HERC6-206ENST00000506714 KRTAP19-7Q3SYF9 63 aa5.28□□□□□ -1.56
HERC6-206ENST00000506714 KRTAP9-9Q9BYP9 154 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms