RNA–Protein interactions for RNA: ENST00000506648.1

PACRGL-214, Transcript of parkin coregulated like, humanhuman

TSL 2

Gene PACRGL, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-214ENST00000506648 FAM208BQ5VWN6 2430 aa1.58□□□□□ -2.16
PACRGL-214ENST00000506648 A0A0D9SG42 100 aa1.58□□□□□ -2.16
PACRGL-214ENST00000506648 KRTAP13-2Q52LG2 175 aa1.58□□□□□ -2.16
PACRGL-214ENST00000506648 C10orf95Q9H7T3 257 aa1.58□□□□□ -2.16
PACRGL-214ENST00000506648 ANK3Q12955 4377 aaKnown RBP1.58□□□□□ -2.16
PACRGL-214ENST00000506648 POLQO75417 2590 aa1.58□□□□□ -2.16
PACRGL-214ENST00000506648 ACANP16112 2415 aa1.58□□□□□ -2.16
PACRGL-214ENST00000506648 CCDC168Q8NDH2 2452 aa1.58□□□□□ -2.16
PACRGL-214ENST00000506648 FLNAP21333 2647 aaKnown RBP1.57□□□□□ -2.16
PACRGL-214ENST00000506648 HECTD1Q9ULT8 2610 aa1.57□□□□□ -2.16
PACRGL-214ENST00000506648 TENM4Q6N022 2769 aa1.57□□□□□ -2.16
PACRGL-214ENST00000506648 PRO2289Q9P1D8 64 aa1.56□□□□□ -2.16
PACRGL-214ENST00000506648 FASNP49327 2511 aaKnown RBP1.56□□□□□ -2.16
PACRGL-214ENST00000506648 FLNCQ14315 2725 aa1.55□□□□□ -2.16
PACRGL-214ENST00000506648 MUC3AQ02505 3323 aa1.55□□□□□ -2.16
PACRGL-214ENST00000506648 VWFP04275 2813 aa1.55□□□□□ -2.16
PACRGL-214ENST00000506648 KRTAP12-1P59990 96 aa1.55□□□□□ -2.16
PACRGL-214ENST00000506648 KRTAP21-2Q3LI59 83 aa1.55□□□□□ -2.16
PACRGL-214ENST00000506648 CSMD2Q7Z408 3487 aa1.55□□□□□ -2.16
PACRGL-214ENST00000506648 CACNA1AO00555 2505 aa1.55□□□□□ -2.16
PACRGL-214ENST00000506648 INE1O15225 51 aa1.54□□□□□ -2.16
PACRGL-214ENST00000506648 MEGF8Q7Z7M0 2845 aa1.53□□□□□ -2.16
PACRGL-214ENST00000506648 VPS13DQ5THJ4 4388 aa1.53□□□□□ -2.16
PACRGL-214ENST00000506648 TGP01266 2768 aa1.53□□□□□ -2.16
PACRGL-214ENST00000506648 KRTAP13-4Q3LI77 160 aa1.53□□□□□ -2.16
PACRGL-214ENST00000506648 SMR3AQ99954 134 aa1.53□□□□□ -2.16
PACRGL-214ENST00000506648 PKD1L1Q8TDX9 2849 aa1.53□□□□□ -2.17
PACRGL-214ENST00000506648 TEP1Q99973 2627 aaKnown RBP1.53□□□□□ -2.17
PACRGL-214ENST00000506648 DNAH8Q96JB1 4490 aa1.52□□□□□ -2.17
PACRGL-214ENST00000506648 FBN1P35555 2871 aaKnown RBP1.52□□□□□ -2.17
PACRGL-214ENST00000506648 PDZD2O15018 2839 aa1.52□□□□□ -2.17
PACRGL-214ENST00000506648 NBEAL1Q6ZS30 2694 aa1.52□□□□□ -2.17
PACRGL-214ENST00000506648 DNAH3Q8TD57 4116 aa1.51□□□□□ -2.17
PACRGL-214ENST00000506648 MAST4O15021 2626 aa1.51□□□□□ -2.17
PACRGL-214ENST00000506648 J3QKU1 62 aa1.51□□□□□ -2.17
PACRGL-214ENST00000506648 TRRAPQ9Y4A5 3859 aa1.5□□□□□ -2.17
PACRGL-214ENST00000506648 TENM3Q9P273 2699 aa1.5□□□□□ -2.17
PACRGL-214ENST00000506648 ATRQ13535 2644 aa1.5□□□□□ -2.17
PACRGL-214ENST00000506648 IGSF10Q6WRI0 2623 aa1.5□□□□□ -2.17
PACRGL-214ENST00000506648 ITPR2Q14571 2701 aa1.49□□□□□ -2.17
PACRGL-214ENST00000506648 DNAH10Q8IVF4 4471 aa1.49□□□□□ -2.17
PACRGL-214ENST00000506648 C9orf92A6NGG3 77 aa1.49□□□□□ -2.17
PACRGL-214ENST00000506648 FRAS1Q86XX4 4008 aa1.49□□□□□ -2.17
PACRGL-214ENST00000506648 COL6A5A8TX70 2615 aa1.49□□□□□ -2.17
PACRGL-214ENST00000506648 DNAH17Q9UFH2 4485 aa1.48□□□□□ -2.17
PACRGL-214ENST00000506648 DYNC2H1Q8NCM8 4307 aaKnown RBP1.48□□□□□ -2.17
PACRGL-214ENST00000506648 FLNBO75369 2602 aaKnown RBP1.48□□□□□ -2.17
PACRGL-214ENST00000506648 STAB2Q8WWQ8 2551 aa1.48□□□□□ -2.17
PACRGL-214ENST00000506648 COL7A1Q02388 2944 aa1.47□□□□□ -2.17
PACRGL-214ENST00000506648 ANK2Q01484 3957 aa1.47□□□□□ -2.17
PACRGL-214ENST00000506648 NSD1Q96L73 2696 aaPredicted RBP1.47□□□□□ -2.17
PACRGL-214ENST00000506648 NOTCH1P46531 2555 aa1.47□□□□□ -2.17
PACRGL-214ENST00000506648 TENM1Q9UKZ4 2725 aa1.46□□□□□ -2.17
PACRGL-214ENST00000506648 DNAH9Q9NYC9 4486 aa1.46□□□□□ -2.17
PACRGL-214ENST00000506648 CUBNO60494 3623 aa1.46□□□□□ -2.18
PACRGL-214ENST00000506648 USP24Q9UPU5 2620 aa1.46□□□□□ -2.18
PACRGL-214ENST00000506648 LYSTQ99698 3801 aa1.46□□□□□ -2.18
PACRGL-214ENST00000506648 R4GN34 69 aa1.46□□□□□ -2.18
PACRGL-214ENST00000506648 HUWE1Q7Z6Z7 4374 aaKnown RBP1.45□□□□□ -2.18
PACRGL-214ENST00000506648 Q5VSD8 79 aa1.45□□□□□ -2.18
PACRGL-214ENST00000506648 HECTD4Q9Y4D8 3996 aa1.45□□□□□ -2.18
PACRGL-214ENST00000506648 DNAH2Q9P225 4427 aa1.45□□□□□ -2.18
PACRGL-214ENST00000506648 DMBT1Q9UGM3 2413 aaPredicted RBP1.45□□□□□ -2.18
PACRGL-214ENST00000506648 DNAH11Q96DT5 4516 aa1.45□□□□□ -2.18
PACRGL-214ENST00000506648 PRKDCP78527 4128 aaKnown RBP1.44□□□□□ -2.18
PACRGL-214ENST00000506648 DNAH6Q9C0G6 4158 aa1.44□□□□□ -2.18
PACRGL-214ENST00000506648 DNAH7Q8WXX0 4024 aa1.44□□□□□ -2.18
PACRGL-214ENST00000506648 ZNF469Q96JG9 3925 aaPredicted RBP1.44□□□□□ -2.18
PACRGL-214ENST00000506648 TNP1P09430 55 aa1.43□□□□□ -2.18
PACRGL-214ENST00000506648 CMYA5Q8N3K9 4069 aa1.42□□□□□ -2.18
PACRGL-214ENST00000506648 STAB1Q9NY15 2570 aa1.42□□□□□ -2.18
PACRGL-214ENST00000506648 MGAM2Q2M2H8 2515 aa1.42□□□□□ -2.18
PACRGL-214ENST00000506648 PLECQ15149 4684 aaKnown RBP1.42□□□□□ -2.18
PACRGL-214ENST00000506648 CSMD3Q7Z407 3707 aa1.42□□□□□ -2.18
PACRGL-214ENST00000506648 SACSQ9NZJ4 4579 aa1.41□□□□□ -2.18
PACRGL-214ENST00000506648 FBN3Q75N90 2809 aa1.39□□□□□ -2.19
PACRGL-214ENST00000506648 LRP1BQ9NZR2 4599 aa1.37□□□□□ -2.19
PACRGL-214ENST00000506648 DNAH5Q8TE73 4624 aa1.36□□□□□ -2.19
PACRGL-214ENST00000506648 PKHD1L1Q86WI1 4243 aa1.34□□□□□ -2.19
PACRGL-214ENST00000506648 KRTAP12-4P60329 112 aa1.34□□□□□ -2.19
PACRGL-214ENST00000506648 DYNC1H1Q14204 4646 aaKnown RBP1.34□□□□□ -2.19
PACRGL-214ENST00000506648 APOBP04114 4563 aaKnown RBP1.34□□□□□ -2.2
PACRGL-214ENST00000506648 KMT2AQ03164 3969 aa1.34□□□□□ -2.2
PACRGL-214ENST00000506648 MYCBP2O75592 4640 aa1.34□□□□□ -2.2
PACRGL-214ENST00000506648 VPS13BQ7Z7G8 4022 aa1.34□□□□□ -2.2
PACRGL-214ENST00000506648 CRCT1Q9UGL9 99 aa1.33□□□□□ -2.2
PACRGL-214ENST00000506648 STARD9Q9P2P6 4700 aa1.33□□□□□ -2.2
PACRGL-214ENST00000506648 LRP1Q07954 4544 aaKnown RBP1.33□□□□□ -2.2
PACRGL-214ENST00000506648 KRTAP10-4P60372 401 aaPredicted RBP1.32□□□□□ -2.2
PACRGL-214ENST00000506648 PKHD1P08F94 4074 aa1.31□□□□□ -2.2
PACRGL-214ENST00000506648 SMR3BP02814 79 aaPredicted RBP1.31□□□□□ -2.2
PACRGL-214ENST00000506648 FAT3Q8TDW7 4589 aa1.3□□□□□ -2.2
PACRGL-214ENST00000506648 PKD1P98161 4303 aa1.3□□□□□ -2.2
PACRGL-214ENST00000506648 TNXBP22105 4242 aa1.29□□□□□ -2.2
PACRGL-214ENST00000506648 FAT2Q9NYQ8 4349 aa1.28□□□□□ -2.2
PACRGL-214ENST00000506648 FAT1Q14517 4588 aa1.28□□□□□ -2.2
PACRGL-214ENST00000506648 HSPG2P98160 4391 aa1.28□□□□□ -2.21
PACRGL-214ENST00000506648 KRTAP4-1Q9BYQ7 146 aa1.27□□□□□ -2.21
PACRGL-214ENST00000506648 KRTAP12-3P60328 96 aa1.26□□□□□ -2.21
PACRGL-214ENST00000506648 KRTAP8-1Q8IUC2 63 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms