RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 LINC00208Q96KT6 92 aa7.07□□□□□ -1.28
MED28-204ENST00000506409 OCR1Q9BZK8 76 aa7.07□□□□□ -1.28
MED28-204ENST00000506409 MP68P56378 58 aa7.05□□□□□ -1.28
MED28-204ENST00000506409 KLKP1Q107X0 134 aa7.02□□□□□ -1.29
MED28-204ENST00000506409 A8MUN3 132 aa7.01□□□□□ -1.29
MED28-204ENST00000506409 NDUFC1O43677 76 aa7□□□□□ -1.29
MED28-204ENST00000506409 SPRR2GQ9BYE4 73 aa7□□□□□ -1.29
MED28-204ENST00000506409 SCGB1A1P11684 91 aa6.97□□□□□ -1.29
MED28-204ENST00000506409 Q5VV11 94 aa6.96□□□□□ -1.3
MED28-204ENST00000506409 IMUPQ9GZP8 106 aa6.96□□□□□ -1.3
MED28-204ENST00000506409 H3BPC8 53 aa6.94□□□□□ -1.3
MED28-204ENST00000506409 MT1BP07438 61 aa6.94□□□□□ -1.3
MED28-204ENST00000506409 KRTAP19-8Q3LI54 63 aa6.94□□□□□ -1.3
MED28-204ENST00000506409 MACF1Q9UPN3 7388 aaKnown RBP6.93□□□□□ -1.3
MED28-204ENST00000506409 CRIPTQ9P021 101 aa6.93□□□□□ -1.3
MED28-204ENST00000506409 H0YAA0 97 aa6.91□□□□□ -1.3
MED28-204ENST00000506409 SYNE2Q8WXH0 6885 aaKnown RBP6.87□□□□□ -1.31
MED28-204ENST00000506409 A6NN06 94 aa6.86□□□□□ -1.31
MED28-204ENST00000506409 K7ERU9 68 aa6.86□□□□□ -1.31
MED28-204ENST00000506409 MT-ATP8P03928 68 aa6.84□□□□□ -1.31
MED28-204ENST00000506409 ADM2Q7Z4H4 148 aa6.84□□□□□ -1.31
MED28-204ENST00000506409 DMAC1Q96GE9 116 aa6.83□□□□□ -1.32
MED28-204ENST00000506409 SMIM20Q8N5G0 67 aa6.78□□□□□ -1.32
MED28-204ENST00000506409 KRTAP10-5P60370 271 aa6.77□□□□□ -1.33
MED28-204ENST00000506409 TRAV7A0A075B6U4 112 aa6.76□□□□□ -1.33
MED28-204ENST00000506409 KRTAP6-3Q3LI67 103 aa6.74□□□□□ -1.33
MED28-204ENST00000506409 C20orf197Q8N268 126 aa6.71□□□□□ -1.34
MED28-204ENST00000506409 P0C880 135 aa6.69□□□□□ -1.34
MED28-204ENST00000506409 ACYP2P14621 99 aa6.68□□□□□ -1.34
MED28-204ENST00000506409 R4GN34 69 aa6.68□□□□□ -1.34
MED28-204ENST00000506409 M0QZ58 72 aa6.63□□□□□ -1.35
MED28-204ENST00000506409 SNURFQ9Y675 71 aa6.63□□□□□ -1.35
MED28-204ENST00000506409 SPTSSBQ8NFR3 76 aa6.6□□□□□ -1.35
MED28-204ENST00000506409 PLAC4Q8WY50 150 aa6.6□□□□□ -1.35
MED28-204ENST00000506409 CHKB-CPT1BH3BT56 60 aa6.58□□□□□ -1.36
MED28-204ENST00000506409 PRO2289Q9P1D8 64 aa6.57□□□□□ -1.36
MED28-204ENST00000506409 SERP2Q8N6R1 65 aa6.56□□□□□ -1.36
MED28-204ENST00000506409 MT1XP80297 61 aa6.53□□□□□ -1.36
MED28-204ENST00000506409 LINC01554Q52M75 96 aa6.53□□□□□ -1.36
MED28-204ENST00000506409 SPANXA2-OT1Q8N9U9 137 aa6.53□□□□□ -1.36
MED28-204ENST00000506409 KRTAP5-9P26371 169 aa6.46□□□□□ -1.38
MED28-204ENST00000506409 NEBP20929 6669 aa6.44□□□□□ -1.38
MED28-204ENST00000506409 MUC12Q9UKN1 5478 aa6.43□□□□□ -1.38
MED28-204ENST00000506409 COX7CP15954 63 aa6.37□□□□□ -1.39
MED28-204ENST00000506409 KMT2DO14686 5537 aa6.36□□□□□ -1.39
MED28-204ENST00000506409 KRTAP12-2P59991 146 aa6.35□□□□□ -1.39
MED28-204ENST00000506409 COA5Q86WW8 74 aa6.35□□□□□ -1.39
MED28-204ENST00000506409 KRTAP8-1Q8IUC2 63 aa6.3□□□□□ -1.4
MED28-204ENST00000506409 SPRR2FQ96RM1 72 aa6.3□□□□□ -1.4
MED28-204ENST00000506409 H7BZZ5 65 aa6.27□□□□□ -1.41
MED28-204ENST00000506409 KRTAP13-4Q3LI77 160 aa6.27□□□□□ -1.41
MED28-204ENST00000506409 CYSTM1Q9H1C7 97 aa6.26□□□□□ -1.41
MED28-204ENST00000506409 MDN1Q9NU22 5596 aa6.26□□□□□ -1.41
MED28-204ENST00000506409 KRTAP4-8A0A0G2JLE6 195 aa6.23□□□□□ -1.41
MED28-204ENST00000506409 SEC61GP60059 68 aa6.23□□□□□ -1.41
MED28-204ENST00000506409 KRTAP10-7P60409 375 aaPredicted RBP6.23□□□□□ -1.41
MED28-204ENST00000506409 KRTAP4-8Q9BYQ9 185 aa6.23□□□□□ -1.41
MED28-204ENST00000506409 KRTAP20-1Q3LI63 56 aa6.21□□□□□ -1.42
MED28-204ENST00000506409 SERP1Q9Y6X1 66 aa6.21□□□□□ -1.42
MED28-204ENST00000506409 KRTAP10-12P60413 245 aa6.2□□□□□ -1.42
MED28-204ENST00000506409 SPRR2EP22531 72 aa6.19□□□□□ -1.42
MED28-204ENST00000506409 SPRR2BP35325 72 aa6.19□□□□□ -1.42
MED28-204ENST00000506409 SPRR2AP35326 72 aa6.19□□□□□ -1.42
MED28-204ENST00000506409 ANAPC13Q9BS18 74 aa6.18□□□□□ -1.42
MED28-204ENST00000506409 CAMK2N1Q7Z7J9 78 aa6.16□□□□□ -1.42
MED28-204ENST00000506409 A0A0D9SG42 100 aa6.11□□□□□ -1.43
MED28-204ENST00000506409 LCE1AQ5T7P2 110 aa6.11□□□□□ -1.43
MED28-204ENST00000506409 A0A1B0GU33 70 aa6.1□□□□□ -1.43
MED28-204ENST00000506409 SPATA8Q6RVD6 105 aa6.1□□□□□ -1.43
MED28-204ENST00000506409 KRTAP2-3P0C7H8 128 aa6.07□□□□□ -1.44
MED28-204ENST00000506409 KRTAP2-4Q9BYR9 128 aa6.07□□□□□ -1.44
MED28-204ENST00000506409 CCDC179H3BU77 68 aa6.05□□□□□ -1.44
MED28-204ENST00000506409 A0A1B0GU69 56 aa6.03□□□□□ -1.44
MED28-204ENST00000506409 SPINT4Q6UDR6 99 aa6.02□□□□□ -1.45
MED28-204ENST00000506409 SPRR2DP22532 72 aa5.98□□□□□ -1.45
MED28-204ENST00000506409 ATP5EP56381 51 aaPredicted RBP5.97□□□□□ -1.45
MED28-204ENST00000506409 KRTAP12-1P59990 96 aa5.97□□□□□ -1.45
MED28-204ENST00000506409 SMIM26A0A096LP01 95 aa5.93□□□□□ -1.46
MED28-204ENST00000506409 A8MU10 97 aa5.88□□□□□ -1.47
MED28-204ENST00000506409 KRTAP2-2Q9BYT5 123 aa5.88□□□□□ -1.47
MED28-204ENST00000506409 KRTAP2-1Q9BYU5 128 aa5.88□□□□□ -1.47
MED28-204ENST00000506409 PRR15LQ9BU68 103 aa5.87□□□□□ -1.47
MED28-204ENST00000506409 TMEM258P61165 79 aa5.83□□□□□ -1.48
MED28-204ENST00000506409 KRTAP19-7Q3SYF9 63 aa5.83□□□□□ -1.48
MED28-204ENST00000506409 LCE3BQ5TA77 95 aa5.81□□□□□ -1.48
MED28-204ENST00000506409 LINC01558Q9Y6Z2 57 aa5.81□□□□□ -1.48
MED28-204ENST00000506409 MT1EP04732 61 aa5.78□□□□□ -1.48
MED28-204ENST00000506409 KRTAP19-3Q7Z4W3 81 aa5.73□□□□□ -1.49
MED28-204ENST00000506409 LCE5AQ5TCM9 118 aa5.72□□□□□ -1.49
MED28-204ENST00000506409 KRTAP19-5Q3LI72 72 aa5.71□□□□□ -1.5
MED28-204ENST00000506409 C10orf95Q9H7T3 257 aa5.7□□□□□ -1.5
MED28-204ENST00000506409 LOC100996750A0A140TA64 210 aa5.69□□□□□ -1.5
MED28-204ENST00000506409 KRTAP4-6Q9BYQ5 205 aa5.69□□□□□ -1.5
MED28-204ENST00000506409 TNP1P09430 55 aa5.68□□□□□ -1.5
MED28-204ENST00000506409 UQCR11O14957 56 aa5.67□□□□□ -1.5
MED28-204ENST00000506409 LCE3AQ5TA76 89 aa5.62□□□□□ -1.51
MED28-204ENST00000506409 MT1GP13640 62 aa5.59□□□□□ -1.51
MED28-204ENST00000506409 PP632Q6XCG6 107 aa5.56□□□□□ -1.52
MED28-204ENST00000506409 MIR22HGQ0VDD5 57 aa5.55□□□□□ -1.52
MED28-204ENST00000506409 MT1LQ93083 61 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms