RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 C9orf153Q5TBE3 101 aa3.14□□□□□ -1.91
SCLT1-207ENST00000506233 TRAV22A0A0B4J277 110 aa3.13□□□□□ -1.91
SCLT1-207ENST00000506233 F8WEM9 126 aa3.13□□□□□ -1.91
SCLT1-207ENST00000506233 SPINK6Q6UWN8 80 aa3.12□□□□□ -1.91
SCLT1-207ENST00000506233 SSBP3-AS1Q7Z2R9 100 aa3.12□□□□□ -1.91
SCLT1-207ENST00000506233 TMEM258P61165 79 aa3.12□□□□□ -1.91
SCLT1-207ENST00000506233 RPS29P62273 56 aaKnown RBP3.12□□□□□ -1.91
SCLT1-207ENST00000506233 C7orf65Q6ZTY9 151 aa3.12□□□□□ -1.91
SCLT1-207ENST00000506233 CYP4F30PQ9H0H9 118 aa3.12□□□□□ -1.91
SCLT1-207ENST00000506233 hDV103S1A0JD37 113 aa3.11□□□□□ -1.91
SCLT1-207ENST00000506233 LCE1AQ5T7P2 110 aa3.11□□□□□ -1.91
SCLT1-207ENST00000506233 WFDC13Q8IUB5 93 aa3.11□□□□□ -1.91
SCLT1-207ENST00000506233 LCE1FQ5T754 118 aa3.1□□□□□ -1.91
SCLT1-207ENST00000506233 CASC2Q6XLA1 102 aa3.09□□□□□ -1.91
SCLT1-207ENST00000506233 A0A1B0GU33 70 aa3.08□□□□□ -1.92
SCLT1-207ENST00000506233 C20orf166-AS1Q96NR2 134 aa3.08□□□□□ -1.92
SCLT1-207ENST00000506233 KRTAP4-1Q9BYQ7 146 aa3.08□□□□□ -1.92
SCLT1-207ENST00000506233 A8MU10 97 aa3.08□□□□□ -1.92
SCLT1-207ENST00000506233 RETNLBQ9BQ08 111 aa3.07□□□□□ -1.92
SCLT1-207ENST00000506233 R4GN34 69 aa3.07□□□□□ -1.92
SCLT1-207ENST00000506233 MRPL34Q9BQ48 92 aaKnown RBP3.07□□□□□ -1.92
SCLT1-207ENST00000506233 H3BPC8 53 aa3.07□□□□□ -1.92
SCLT1-207ENST00000506233 ROMO1P60602 79 aa3.06□□□□□ -1.92
SCLT1-207ENST00000506233 HRES1P13985 223 aa3.04□□□□□ -1.92
SCLT1-207ENST00000506233 H0Y9P7 68 aa3.04□□□□□ -1.92
SCLT1-207ENST00000506233 P0C880 135 aa3.04□□□□□ -1.92
SCLT1-207ENST00000506233 SPINK1P00995 79 aa3.03□□□□□ -1.92
SCLT1-207ENST00000506233 Q5VSD8 79 aa3.03□□□□□ -1.92
SCLT1-207ENST00000506233 SERP1Q9Y6X1 66 aa3.03□□□□□ -1.93
SCLT1-207ENST00000506233 A6NN06 94 aa3.01□□□□□ -1.93
SCLT1-207ENST00000506233 KRTAP4-8Q9BYQ9 185 aa3.01□□□□□ -1.93
SCLT1-207ENST00000506233 NDUFC1O43677 76 aa3□□□□□ -1.93
SCLT1-207ENST00000506233 Q1T7F1 81 aa3□□□□□ -1.93
SCLT1-207ENST00000506233 LINC00208Q96KT6 92 aa3□□□□□ -1.93
SCLT1-207ENST00000506233 DMAC1Q96GE9 116 aa2.99□□□□□ -1.93
SCLT1-207ENST00000506233 KRTAP9-2Q9BYQ4 174 aa2.99□□□□□ -1.93
SCLT1-207ENST00000506233 LINC00304Q8N9R0 145 aa2.99□□□□□ -1.93
SCLT1-207ENST00000506233 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.99□□□□□ -1.93
SCLT1-207ENST00000506233 TP53AIP1Q9HCN2 124 aa2.98□□□□□ -1.93
SCLT1-207ENST00000506233 Q5VV11 94 aa2.98□□□□□ -1.93
SCLT1-207ENST00000506233 LOC101927531A0A1B0GV80 90 aa2.94□□□□□ -1.94
SCLT1-207ENST00000506233 PCOTHQ58A44 107 aa2.94□□□□□ -1.94
SCLT1-207ENST00000506233 C9orf92A6NGG3 77 aa2.94□□□□□ -1.94
SCLT1-207ENST00000506233 COA5Q86WW8 74 aa2.94□□□□□ -1.94
SCLT1-207ENST00000506233 ATP5EP56381 51 aaPredicted RBP2.93□□□□□ -1.94
SCLT1-207ENST00000506233 KRTAP10-6P60371 365 aaPredicted RBP2.92□□□□□ -1.94
SCLT1-207ENST00000506233 SPAG11AQ6PDA7 123 aa2.92□□□□□ -1.94
SCLT1-207ENST00000506233 SPINT4Q6UDR6 99 aa2.92□□□□□ -1.94
SCLT1-207ENST00000506233 RPL37P61927 97 aaKnown RBP2.91□□□□□ -1.94
SCLT1-207ENST00000506233 LIMD2Q9BT23 127 aa2.91□□□□□ -1.94
SCLT1-207ENST00000506233 NDUFB1O75438 58 aa2.89□□□□□ -1.95
SCLT1-207ENST00000506233 LINC01558Q9Y6Z2 57 aa2.89□□□□□ -1.95
SCLT1-207ENST00000506233 KRTAP13-4Q3LI77 160 aa2.89□□□□□ -1.95
SCLT1-207ENST00000506233 TPRXLQ17RH7 258 aa2.88□□□□□ -1.95
SCLT1-207ENST00000506233 SPINK7P58062 85 aa2.87□□□□□ -1.95
SCLT1-207ENST00000506233 KRTAP2-2Q9BYT5 123 aa2.87□□□□□ -1.95
SCLT1-207ENST00000506233 ATP11AUNQ6ZP68 121 aa2.87□□□□□ -1.95
SCLT1-207ENST00000506233 LCE3BQ5TA77 95 aa2.87□□□□□ -1.95
SCLT1-207ENST00000506233 MIR22HGQ0VDD5 57 aa2.86□□□□□ -1.95
SCLT1-207ENST00000506233 LCE3CQ5T5A8 94 aa2.85□□□□□ -1.95
SCLT1-207ENST00000506233 PRO2289Q9P1D8 64 aa2.84□□□□□ -1.95
SCLT1-207ENST00000506233 H0YAA0 97 aa2.83□□□□□ -1.96
SCLT1-207ENST00000506233 USH2AO75445 5202 aa2.8□□□□□ -1.96
SCLT1-207ENST00000506233 MT3P25713 68 aa2.8□□□□□ -1.96
SCLT1-207ENST00000506233 COX6B2Q6YFQ2 88 aa2.79□□□□□ -1.96
SCLT1-207ENST00000506233 DMBT1Q9UGM3 2413 aaPredicted RBP2.77□□□□□ -1.97
SCLT1-207ENST00000506233 CSAG1Q6PB30 78 aa2.77□□□□□ -1.97
SCLT1-207ENST00000506233 ACYP2P14621 99 aa2.76□□□□□ -1.97
SCLT1-207ENST00000506233 SPATA8Q6RVD6 105 aa2.75□□□□□ -1.97
SCLT1-207ENST00000506233 KRTAP9-8Q9BYQ0 159 aa2.75□□□□□ -1.97
SCLT1-207ENST00000506233 KRTAP4-8A0A0G2JLE6 195 aa2.74□□□□□ -1.97
SCLT1-207ENST00000506233 SPTSSBQ8NFR3 76 aa2.73□□□□□ -1.97
SCLT1-207ENST00000506233 PRR15LQ9BU68 103 aa2.72□□□□□ -1.97
SCLT1-207ENST00000506233 CDC42SE1Q9NRR8 79 aa2.71□□□□□ -1.98
SCLT1-207ENST00000506233 KRTAP10-12P60413 245 aa2.7□□□□□ -1.98
SCLT1-207ENST00000506233 MT1HP80294 61 aa2.7□□□□□ -1.98
SCLT1-207ENST00000506233 KRTAP12-2P59991 146 aa2.67□□□□□ -1.98
SCLT1-207ENST00000506233 KMT2DO14686 5537 aa2.67□□□□□ -1.98
SCLT1-207ENST00000506233 H1FX-AS1Q4G0G2 97 aa2.67□□□□□ -1.98
SCLT1-207ENST00000506233 LCE1DQ5T752 114 aa2.67□□□□□ -1.98
SCLT1-207ENST00000506233 SSPOA2VEC9 5147 aa2.66□□□□□ -1.98
SCLT1-207ENST00000506233 KRTAP4-7Q9BYR0 210 aa2.66□□□□□ -1.98
SCLT1-207ENST00000506233 LCE3EQ5T5B0 92 aa2.66□□□□□ -1.98
SCLT1-207ENST00000506233 KRTAP12-1P59990 96 aa2.64□□□□□ -1.99
SCLT1-207ENST00000506233 CHKB-CPT1BH3BT56 60 aa2.64□□□□□ -1.99
SCLT1-207ENST00000506233 MT1FP04733 61 aa2.63□□□□□ -1.99
SCLT1-207ENST00000506233 KRTAP4-9Q9BYQ8 210 aa2.63□□□□□ -1.99
SCLT1-207ENST00000506233 S4R3F8 94 aa2.62□□□□□ -1.99
SCLT1-207ENST00000506233 A0A1B0GU69 56 aa2.61□□□□□ -1.99
SCLT1-207ENST00000506233 MT2AP02795 61 aa2.6□□□□□ -1.99
SCLT1-207ENST00000506233 SPRR2GQ9BYE4 73 aa2.58□□□□□ -2
SCLT1-207ENST00000506233 KRTAP4-11Q9BYQ6 195 aa2.57□□□□□ -2
SCLT1-207ENST00000506233 MT1BP07438 61 aa2.55□□□□□ -2
SCLT1-207ENST00000506233 C10orf95Q9H7T3 257 aa2.54□□□□□ -2
SCLT1-207ENST00000506233 UQCR11O14957 56 aa2.54□□□□□ -2
SCLT1-207ENST00000506233 KRTAP4-2Q9BYR5 136 aa2.52□□□□□ -2.01
SCLT1-207ENST00000506233 LCE1EQ5T753 118 aa2.52□□□□□ -2.01
SCLT1-207ENST00000506233 KRTAP19-8Q3LI54 63 aa2.52□□□□□ -2.01
SCLT1-207ENST00000506233 KRTAP10-5P60370 271 aa2.5□□□□□ -2.01
SCLT1-207ENST00000506233 MT1XP80297 61 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms