RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 Q5VV11 94 aa7.42□□□□□ -1.22
PDLIM7-215ENST00000506161 LOC101927531A0A1B0GV80 90 aa7.39□□□□□ -1.23
PDLIM7-215ENST00000506161 FAM240AA0A1B0GVK7 77 aa7.38□□□□□ -1.23
PDLIM7-215ENST00000506161 A6NN06 94 aa7.38□□□□□ -1.23
PDLIM7-215ENST00000506161 ACYP1P07311 99 aa7.38□□□□□ -1.23
PDLIM7-215ENST00000506161 HIST1H4AP62805 103 aaKnown RBP7.37□□□□□ -1.23
PDLIM7-215ENST00000506161 KRTAP10-5P60370 271 aa7.36□□□□□ -1.23
PDLIM7-215ENST00000506161 MDN1Q9NU22 5596 aa7.36□□□□□ -1.23
PDLIM7-215ENST00000506161 H0Y9P7 68 aa7.35□□□□□ -1.23
PDLIM7-215ENST00000506161 KRTAP5-9P26371 169 aa7.35□□□□□ -1.23
PDLIM7-215ENST00000506161 KRTAP2-3P0C7H8 128 aa7.34□□□□□ -1.23
PDLIM7-215ENST00000506161 ATP5EP2Q5VTU8 51 aa7.34□□□□□ -1.23
PDLIM7-215ENST00000506161 KRTAP2-4Q9BYR9 128 aa7.34□□□□□ -1.23
PDLIM7-215ENST00000506161 UQCRQO14949 82 aa7.33□□□□□ -1.24
PDLIM7-215ENST00000506161 KMT2DO14686 5537 aa7.32□□□□□ -1.24
PDLIM7-215ENST00000506161 PCP4P48539 62 aa7.25□□□□□ -1.25
PDLIM7-215ENST00000506161 LINC00643Q86TS7 51 aa7.25□□□□□ -1.25
PDLIM7-215ENST00000506161 ATOX1O00244 68 aa7.23□□□□□ -1.25
PDLIM7-215ENST00000506161 LINC00208Q96KT6 92 aa7.23□□□□□ -1.25
PDLIM7-215ENST00000506161 OCR1Q9BZK8 76 aa7.23□□□□□ -1.25
PDLIM7-215ENST00000506161 H0YAA0 97 aa7.21□□□□□ -1.26
PDLIM7-215ENST00000506161 IMUPQ9GZP8 106 aa7.21□□□□□ -1.26
PDLIM7-215ENST00000506161 CRIPTQ9P021 101 aa7.21□□□□□ -1.26
PDLIM7-215ENST00000506161 NDUFC1O43677 76 aa7.2□□□□□ -1.26
PDLIM7-215ENST00000506161 J3QR89 54 aa7.18□□□□□ -1.26
PDLIM7-215ENST00000506161 K7ERU9 68 aa7.18□□□□□ -1.26
PDLIM7-215ENST00000506161 ADM2Q7Z4H4 148 aa7.17□□□□□ -1.26
PDLIM7-215ENST00000506161 A8MUN3 132 aa7.14□□□□□ -1.27
PDLIM7-215ENST00000506161 P0C880 135 aa7.08□□□□□ -1.28
PDLIM7-215ENST00000506161 MT1XP80297 61 aa7.08□□□□□ -1.28
PDLIM7-215ENST00000506161 KRTAP2-2Q9BYT5 123 aa7.08□□□□□ -1.28
PDLIM7-215ENST00000506161 KRTAP2-1Q9BYU5 128 aa7.08□□□□□ -1.28
PDLIM7-215ENST00000506161 MP68P56378 58 aa7.07□□□□□ -1.28
PDLIM7-215ENST00000506161 SPRR2EP22531 72 aa7.05□□□□□ -1.28
PDLIM7-215ENST00000506161 SPRR2BP35325 72 aa7.05□□□□□ -1.28
PDLIM7-215ENST00000506161 SPRR2AP35326 72 aa7.05□□□□□ -1.28
PDLIM7-215ENST00000506161 KRTAP3-2Q9BYR7 98 aa7.03□□□□□ -1.28
PDLIM7-215ENST00000506161 DMAC1Q96GE9 116 aa7.01□□□□□ -1.29
PDLIM7-215ENST00000506161 MT-ATP8P03928 68 aa7□□□□□ -1.29
PDLIM7-215ENST00000506161 SPRR2FQ96RM1 72 aa6.99□□□□□ -1.29
PDLIM7-215ENST00000506161 H3BPC8 53 aa6.96□□□□□ -1.3
PDLIM7-215ENST00000506161 M0QZ58 72 aa6.92□□□□□ -1.3
PDLIM7-215ENST00000506161 R4GN34 69 aa6.92□□□□□ -1.3
PDLIM7-215ENST00000506161 SCGB1A1P11684 91 aa6.9□□□□□ -1.3
PDLIM7-215ENST00000506161 PLAC4Q8WY50 150 aa6.89□□□□□ -1.31
PDLIM7-215ENST00000506161 PRO2289Q9P1D8 64 aa6.87□□□□□ -1.31
PDLIM7-215ENST00000506161 KRTAP4-8A0A0G2JLE6 195 aa6.85□□□□□ -1.31
PDLIM7-215ENST00000506161 KRTAP4-8Q9BYQ9 185 aa6.85□□□□□ -1.31
PDLIM7-215ENST00000506161 LCE1AQ5T7P2 110 aa6.84□□□□□ -1.31
PDLIM7-215ENST00000506161 KRTAP12-2P59991 146 aa6.83□□□□□ -1.32
PDLIM7-215ENST00000506161 LINC01554Q52M75 96 aa6.83□□□□□ -1.32
PDLIM7-215ENST00000506161 SPRR2DP22532 72 aa6.82□□□□□ -1.32
PDLIM7-215ENST00000506161 C20orf197Q8N268 126 aa6.82□□□□□ -1.32
PDLIM7-215ENST00000506161 GPR98Q8WXG9 6306 aa6.81□□□□□ -1.32
PDLIM7-215ENST00000506161 KRTAP8-1Q8IUC2 63 aa6.8□□□□□ -1.32
PDLIM7-215ENST00000506161 TRAV7A0A075B6U4 112 aa6.79□□□□□ -1.32
PDLIM7-215ENST00000506161 KRTAP10-7P60409 375 aaPredicted RBP6.78□□□□□ -1.32
PDLIM7-215ENST00000506161 ACYP2P14621 99 aa6.74□□□□□ -1.33
PDLIM7-215ENST00000506161 SNURFQ9Y675 71 aa6.72□□□□□ -1.33
PDLIM7-215ENST00000506161 LCE3BQ5TA77 95 aa6.69□□□□□ -1.34
PDLIM7-215ENST00000506161 KRTAP10-12P60413 245 aa6.68□□□□□ -1.34
PDLIM7-215ENST00000506161 SMIM20Q8N5G0 67 aa6.66□□□□□ -1.34
PDLIM7-215ENST00000506161 KRTAP13-4Q3LI77 160 aa6.64□□□□□ -1.35
PDLIM7-215ENST00000506161 CHKB-CPT1BH3BT56 60 aa6.6□□□□□ -1.35
PDLIM7-215ENST00000506161 SERP2Q8N6R1 65 aa6.59□□□□□ -1.35
PDLIM7-215ENST00000506161 SPTSSBQ8NFR3 76 aa6.59□□□□□ -1.35
PDLIM7-215ENST00000506161 ANAPC13Q9BS18 74 aa6.59□□□□□ -1.35
PDLIM7-215ENST00000506161 COX7CP15954 63 aa6.54□□□□□ -1.36
PDLIM7-215ENST00000506161 SPANXA2-OT1Q8N9U9 137 aa6.54□□□□□ -1.36
PDLIM7-215ENST00000506161 CCDC179H3BU77 68 aa6.49□□□□□ -1.37
PDLIM7-215ENST00000506161 CYSTM1Q9H1C7 97 aa6.46□□□□□ -1.38
PDLIM7-215ENST00000506161 COA5Q86WW8 74 aa6.43□□□□□ -1.38
PDLIM7-215ENST00000506161 DSTQ03001 7570 aaKnown RBP6.43□□□□□ -1.38
PDLIM7-215ENST00000506161 KRTAP4-9Q9BYQ8 210 aa6.4□□□□□ -1.38
PDLIM7-215ENST00000506161 H7BZZ5 65 aa6.36□□□□□ -1.39
PDLIM7-215ENST00000506161 KRTAP19-7Q3SYF9 63 aa6.34□□□□□ -1.39
PDLIM7-215ENST00000506161 CAMK2N1Q7Z7J9 78 aa6.33□□□□□ -1.4
PDLIM7-215ENST00000506161 A0A0D9SG42 100 aa6.32□□□□□ -1.4
PDLIM7-215ENST00000506161 SPATA8Q6RVD6 105 aa6.32□□□□□ -1.4
PDLIM7-215ENST00000506161 MT1EP04732 61 aa6.26□□□□□ -1.41
PDLIM7-215ENST00000506161 RPS28P62857 69 aaKnown RBP6.26□□□□□ -1.41
PDLIM7-215ENST00000506161 KRTAP12-1P59990 96 aa6.23□□□□□ -1.41
PDLIM7-215ENST00000506161 LCE5AQ5TCM9 118 aa6.23□□□□□ -1.41
PDLIM7-215ENST00000506161 TMEM258P61165 79 aa6.22□□□□□ -1.41
PDLIM7-215ENST00000506161 SERP1Q9Y6X1 66 aa6.2□□□□□ -1.42
PDLIM7-215ENST00000506161 A0A1B0GU33 70 aa6.19□□□□□ -1.42
PDLIM7-215ENST00000506161 SPINT4Q6UDR6 99 aa6.19□□□□□ -1.42
PDLIM7-215ENST00000506161 LCE1DQ5T752 114 aa6.18□□□□□ -1.42
PDLIM7-215ENST00000506161 KRTAP19-3Q7Z4W3 81 aa6.18□□□□□ -1.42
PDLIM7-215ENST00000506161 ATP5EP56381 51 aaPredicted RBP6.16□□□□□ -1.42
PDLIM7-215ENST00000506161 SEC61GP60059 68 aa6.16□□□□□ -1.42
PDLIM7-215ENST00000506161 KRTAP19-5Q3LI72 72 aa6.14□□□□□ -1.43
PDLIM7-215ENST00000506161 HMCN1Q96RW7 5635 aa6.1□□□□□ -1.43
PDLIM7-215ENST00000506161 A8MU10 97 aa6.1□□□□□ -1.43
PDLIM7-215ENST00000506161 KRTAP5-10Q6L8G5 202 aa6.07□□□□□ -1.44
PDLIM7-215ENST00000506161 AHNAK2Q8IVF2 5795 aa6.03□□□□□ -1.44
PDLIM7-215ENST00000506161 A0A1B0GU69 56 aa6.02□□□□□ -1.45
PDLIM7-215ENST00000506161 MT4P47944 62 aa6.02□□□□□ -1.45
PDLIM7-215ENST00000506161 PRO0628Q9UI54 55 aa6.02□□□□□ -1.45
PDLIM7-215ENST00000506161 C10orf95Q9H7T3 257 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms