RNA–Protein interactions for RNA: ENST00000505045.1

CDH9-203, Transcript of cadherin 9, humanhuman

TSL 1 (best)

Gene CDH9, Length 1,801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-203ENST00000505045 CXCL6P80162 114 aa2.56□□□□□ -2
CDH9-203ENST00000505045 F8WEM9 126 aa2.56□□□□□ -2
CDH9-203ENST00000505045 Q6ZVQ6 151 aa2.56□□□□□ -2
CDH9-203ENST00000505045 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.54□□□□□ -2
CDH9-203ENST00000505045 SNURFQ9Y675 71 aa2.54□□□□□ -2
CDH9-203ENST00000505045 NREPQ16612 68 aa2.54□□□□□ -2
CDH9-203ENST00000505045 NOTCH2NLQ7Z3S9 236 aa2.54□□□□□ -2
CDH9-203ENST00000505045 TRBV7-4A0A0J9YYF1 115 aa2.53□□□□□ -2
CDH9-203ENST00000505045 Q96NJ1 140 aa2.52□□□□□ -2.01
CDH9-203ENST00000505045 BPY2O14599 106 aa2.52□□□□□ -2.01
CDH9-203ENST00000505045 TMEM254Q8TBM7 123 aa2.52□□□□□ -2.01
CDH9-203ENST00000505045 CRCT1Q9UGL9 99 aa2.52□□□□□ -2.01
CDH9-203ENST00000505045 A0A087WSZ3 146 aa2.51□□□□□ -2.01
CDH9-203ENST00000505045 Q75L30 129 aa2.51□□□□□ -2.01
CDH9-203ENST00000505045 BRK1Q8WUW1 75 aa2.51□□□□□ -2.01
CDH9-203ENST00000505045 V9GYY9 64 aa2.51□□□□□ -2.01
CDH9-203ENST00000505045 A0A1W2PNM2 257 aa2.5□□□□□ -2.01
CDH9-203ENST00000505045 IGKV4-1P06312 121 aa2.5□□□□□ -2.01
CDH9-203ENST00000505045 COX6B2Q6YFQ2 88 aa2.5□□□□□ -2.01
CDH9-203ENST00000505045 KRTAP16-1A8MUX0 517 aa2.49□□□□□ -2.01
CDH9-203ENST00000505045 LCE3AQ5TA76 89 aa2.49□□□□□ -2.01
CDH9-203ENST00000505045 OCR1Q9BZK8 76 aa2.49□□□□□ -2.01
CDH9-203ENST00000505045 M0R2T5 61 aa2.49□□□□□ -2.01
CDH9-203ENST00000505045 DSCR10P59022 87 aa2.49□□□□□ -2.01
CDH9-203ENST00000505045 SEC61GP60059 68 aa2.49□□□□□ -2.01
CDH9-203ENST00000505045 C20orf166-AS1Q96NR2 134 aa2.49□□□□□ -2.01
CDH9-203ENST00000505045 hDV103S1A0JD37 113 aa2.48□□□□□ -2.01
CDH9-203ENST00000505045 USH2AO75445 5202 aa2.48□□□□□ -2.01
CDH9-203ENST00000505045 A0A1B0GW54 56 aa2.47□□□□□ -2.01
CDH9-203ENST00000505045 A8MUU9 505 aa2.47□□□□□ -2.01
CDH9-203ENST00000505045 Q1T7F1 81 aa2.47□□□□□ -2.01
CDH9-203ENST00000505045 ATP11AUNQ6ZP68 121 aa2.47□□□□□ -2.01
CDH9-203ENST00000505045 PRR15Q8IV56 129 aa2.47□□□□□ -2.01
CDH9-203ENST00000505045 DEFB116Q30KQ4 102 aa2.47□□□□□ -2.01
CDH9-203ENST00000505045 SSPOA2VEC9 5147 aa2.46□□□□□ -2.02
CDH9-203ENST00000505045 PMAIP1Q13794 54 aa2.45□□□□□ -2.02
CDH9-203ENST00000505045 Q8N9L7 120 aa2.45□□□□□ -2.02
CDH9-203ENST00000505045 ZCCHC13Q8WW36 166 aaKnown RBP2.45□□□□□ -2.02
CDH9-203ENST00000505045 CYP4F30PQ9H0H9 118 aa2.45□□□□□ -2.02
CDH9-203ENST00000505045 LINC00472Q9H8W2 130 aa2.45□□□□□ -2.02
CDH9-203ENST00000505045 C1orf64Q8NEQ6 169 aa2.44□□□□□ -2.02
CDH9-203ENST00000505045 HRES1P13985 223 aa2.43□□□□□ -2.02
CDH9-203ENST00000505045 IGHV6-1A0A0B4J1U7 121 aa2.42□□□□□ -2.02
CDH9-203ENST00000505045 TRAV22A0A0B4J277 110 aa2.42□□□□□ -2.02
CDH9-203ENST00000505045 NDUFB1O75438 58 aa2.42□□□□□ -2.02
CDH9-203ENST00000505045 MT2AP02795 61 aa2.42□□□□□ -2.02
CDH9-203ENST00000505045 LINC00313P59037 77 aa2.42□□□□□ -2.02
CDH9-203ENST00000505045 MT1FP04733 61 aa2.41□□□□□ -2.02
CDH9-203ENST00000505045 A0A1B0GVX0 72 aa2.4□□□□□ -2.02
CDH9-203ENST00000505045 HCG22E2RYF7 251 aa2.4□□□□□ -2.02
CDH9-203ENST00000505045 H3BPC8 53 aa2.4□□□□□ -2.02
CDH9-203ENST00000505045 PSPHP1O15172 72 aa2.4□□□□□ -2.02
CDH9-203ENST00000505045 A8MUN3 132 aa2.4□□□□□ -2.03
CDH9-203ENST00000505045 MP68P56378 58 aa2.4□□□□□ -2.03
CDH9-203ENST00000505045 SPANXA2-OT1Q8N9U9 137 aa2.4□□□□□ -2.03
CDH9-203ENST00000505045 K7EQZ3 153 aa2.39□□□□□ -2.03
CDH9-203ENST00000505045 Q5VV11 94 aa2.39□□□□□ -2.03
CDH9-203ENST00000505045 FCGBPQ9Y6R7 5405 aaPredicted RBP2.38□□□□□ -2.03
CDH9-203ENST00000505045 NDUFS5O43920 106 aa2.38□□□□□ -2.03
CDH9-203ENST00000505045 NDUFAF8A1L188 74 aa2.37□□□□□ -2.03
CDH9-203ENST00000505045 C8orf87E5RJ46 101 aa2.37□□□□□ -2.03
CDH9-203ENST00000505045 H0Y9P7 68 aa2.37□□□□□ -2.03
CDH9-203ENST00000505045 CHKB-CPT1BH3BT56 60 aa2.37□□□□□ -2.03
CDH9-203ENST00000505045 KTN1-AS1Q86SY8 53 aa2.37□□□□□ -2.03
CDH9-203ENST00000505045 LINC00208Q96KT6 92 aa2.37□□□□□ -2.03
CDH9-203ENST00000505045 MACF1Q9UPN3 7388 aaKnown RBP2.37□□□□□ -2.03
CDH9-203ENST00000505045 LOC101927531A0A1B0GV80 90 aa2.36□□□□□ -2.03
CDH9-203ENST00000505045 WFDC13Q8IUB5 93 aa2.36□□□□□ -2.03
CDH9-203ENST00000505045 PRR15LQ9BU68 103 aa2.36□□□□□ -2.03
CDH9-203ENST00000505045 A8MWP4 228 aa2.35□□□□□ -2.03
CDH9-203ENST00000505045 SPINK7P58062 85 aa2.35□□□□□ -2.03
CDH9-203ENST00000505045 C8orf17Q9NRJ1 99 aa2.35□□□□□ -2.03
CDH9-203ENST00000505045 RBM12B-AS1Q9P1G2 102 aa2.35□□□□□ -2.03
CDH9-203ENST00000505045 LCE3EQ5T5B0 92 aa2.35□□□□□ -2.03
CDH9-203ENST00000505045 CASC2Q6XLA1 102 aa2.35□□□□□ -2.03
CDH9-203ENST00000505045 MMP24-AS1A0A0U1RRL7 71 aa2.34□□□□□ -2.03
CDH9-203ENST00000505045 A6NN06 94 aa2.34□□□□□ -2.03
CDH9-203ENST00000505045 A8MU10 97 aa2.34□□□□□ -2.03
CDH9-203ENST00000505045 KRTAP10-10P60014 251 aa2.34□□□□□ -2.03
CDH9-203ENST00000505045 CDC42SE1Q9NRR8 79 aa2.34□□□□□ -2.03
CDH9-203ENST00000505045 LINC01558Q9Y6Z2 57 aa2.34□□□□□ -2.03
CDH9-203ENST00000505045 SYNE2Q8WXH0 6885 aaKnown RBP2.34□□□□□ -2.04
CDH9-203ENST00000505045 A6NED7 52 aa2.33□□□□□ -2.04
CDH9-203ENST00000505045 LCA10Q71F78 164 aa2.33□□□□□ -2.04
CDH9-203ENST00000505045 COA5Q86WW8 74 aa2.33□□□□□ -2.04
CDH9-203ENST00000505045 PRAC1Q96KF2 57 aa2.33□□□□□ -2.04
CDH9-203ENST00000505045 SPTSSBQ8NFR3 76 aa2.33□□□□□ -2.04
CDH9-203ENST00000505045 C7orf65Q6ZTY9 151 aa2.31□□□□□ -2.04
CDH9-203ENST00000505045 MRPL34Q9BQ48 92 aaKnown RBP2.31□□□□□ -2.04
CDH9-203ENST00000505045 TP53AIP1Q9HCN2 124 aa2.31□□□□□ -2.04
CDH9-203ENST00000505045 Q5W150 140 aa2.3□□□□□ -2.04
CDH9-203ENST00000505045 KRTAP5-5Q701N2 237 aaPredicted RBP2.28□□□□□ -2.04
CDH9-203ENST00000505045 GPR98Q8WXG9 6306 aa2.28□□□□□ -2.04
CDH9-203ENST00000505045 KRTAP19-6Q3LI70 58 aa2.27□□□□□ -2.05
CDH9-203ENST00000505045 H1FX-AS1Q4G0G2 97 aa2.26□□□□□ -2.05
CDH9-203ENST00000505045 KRTAP12-2P59991 146 aa2.24□□□□□ -2.05
CDH9-203ENST00000505045 ACYP2P14621 99 aa2.24□□□□□ -2.05
CDH9-203ENST00000505045 LCE1CQ5T751 118 aa2.24□□□□□ -2.05
CDH9-203ENST00000505045 LCE1BQ5T7P3 118 aa2.24□□□□□ -2.05
CDH9-203ENST00000505045 SPATA8Q6RVD6 105 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms