RNA–Protein interactions for RNA: ENST00000504881.1

SRFBP1-202, Transcript of serum response factor binding protein 1, humanhuman

TSL 3

Gene SRFBP1, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-202ENST00000504881 CD52P31358 61 aa0.27□□□□□ -2.37
SRFBP1-202ENST00000504881 DEFB133Q30KQ1 61 aa0.27□□□□□ -2.37
SRFBP1-202ENST00000504881 MXRA5Q9NR99 2828 aa0.27□□□□□ -2.37
SRFBP1-202ENST00000504881 ZANQ9Y493 2812 aa0.27□□□□□ -2.37
SRFBP1-202ENST00000504881 COL12A1Q99715 3063 aa0.27□□□□□ -2.37
SRFBP1-202ENST00000504881 PDZD2O15018 2839 aa0.26□□□□□ -2.37
SRFBP1-202ENST00000504881 ZZEF1O43149 2961 aa0.26□□□□□ -2.37
SRFBP1-202ENST00000504881 U3KQA8 63 aa0.26□□□□□ -2.37
SRFBP1-202ENST00000504881 FAT4Q6V0I7 4981 aa0.26□□□□□ -2.37
SRFBP1-202ENST00000504881 HTN3P15516 51 aa0.25□□□□□ -2.37
SRFBP1-202ENST00000504881 KRTAP8-1Q8IUC2 63 aa0.25□□□□□ -2.37
SRFBP1-202ENST00000504881 HRNRQ86YZ3 2850 aaPredicted RBP0.25□□□□□ -2.37
SRFBP1-202ENST00000504881 LRP1Q07954 4544 aaKnown RBP0.25□□□□□ -2.37
SRFBP1-202ENST00000504881 CELSR1Q9NYQ6 3014 aa0.24□□□□□ -2.37
SRFBP1-202ENST00000504881 DCHS2Q6V1P9 2916 aa0.24□□□□□ -2.37
SRFBP1-202ENST00000504881 TACC2O95359 2948 aa0.24□□□□□ -2.37
SRFBP1-202ENST00000504881 COL7A1Q02388 2944 aa0.24□□□□□ -2.37
SRFBP1-202ENST00000504881 PRUNE2Q8WUY3 3088 aa0.24□□□□□ -2.37
SRFBP1-202ENST00000504881 DMXL2Q8TDJ6 3036 aa0.24□□□□□ -2.37
SRFBP1-202ENST00000504881 KALRNO60229 2985 aa0.24□□□□□ -2.37
SRFBP1-202ENST00000504881 FRYLO94915 3013 aa0.23□□□□□ -2.37
SRFBP1-202ENST00000504881 FRYQ5TBA9 3013 aa0.23□□□□□ -2.37
SRFBP1-202ENST00000504881 LAMA3Q16787 3333 aa0.23□□□□□ -2.37
SRFBP1-202ENST00000504881 HTTP42858 3142 aa0.23□□□□□ -2.37
SRFBP1-202ENST00000504881 DMXL1Q9Y485 3027 aa0.23□□□□□ -2.37
SRFBP1-202ENST00000504881 TNXBP22105 4242 aa0.22□□□□□ -2.37
SRFBP1-202ENST00000504881 CELSR3Q9NYQ7 3312 aa0.22□□□□□ -2.37
SRFBP1-202ENST00000504881 SYNE1Q8NF91 8797 aaKnown RBP0.22□□□□□ -2.37
SRFBP1-202ENST00000504881 C5orf42Q9H799 3197 aa0.22□□□□□ -2.37
SRFBP1-202ENST00000504881 PRM1P04553 51 aa0.22□□□□□ -2.37
SRFBP1-202ENST00000504881 LAMA1P25391 3075 aa0.22□□□□□ -2.37
SRFBP1-202ENST00000504881 ATMQ13315 3056 aa0.22□□□□□ -2.37
SRFBP1-202ENST00000504881 CFAP54Q96N23 3096 aa0.22□□□□□ -2.37
SRFBP1-202ENST00000504881 CSMD3Q7Z407 3707 aa0.21□□□□□ -2.38
SRFBP1-202ENST00000504881 DNAH12Q6ZR08 3092 aa0.21□□□□□ -2.38
SRFBP1-202ENST00000504881 DEFB4AO15263 64 aa0.21□□□□□ -2.38
SRFBP1-202ENST00000504881 MT1AP04731 61 aa0.21□□□□□ -2.38
SRFBP1-202ENST00000504881 SPRR2BP35325 72 aa0.21□□□□□ -2.38
SRFBP1-202ENST00000504881 TRIOO75962 3097 aa0.2□□□□□ -2.38
SRFBP1-202ENST00000504881 ADGRG4Q8IZF6 3080 aa0.2□□□□□ -2.38
SRFBP1-202ENST00000504881 SMR3BP02814 79 aaPredicted RBP0.2□□□□□ -2.38
SRFBP1-202ENST00000504881 SPRR2DP22532 72 aa0.2□□□□□ -2.38
SRFBP1-202ENST00000504881 SPRR2AP35326 72 aa0.2□□□□□ -2.38
SRFBP1-202ENST00000504881 KRTAP19-5Q3LI72 72 aa0.2□□□□□ -2.38
SRFBP1-202ENST00000504881 CEP350Q5VT06 3117 aa0.2□□□□□ -2.38
SRFBP1-202ENST00000504881 FREM2Q5SZK8 3169 aa0.19□□□□□ -2.38
SRFBP1-202ENST00000504881 SPRR2FQ96RM1 72 aa0.19□□□□□ -2.38
SRFBP1-202ENST00000504881 EP400Q96L91 3159 aa0.19□□□□□ -2.38
SRFBP1-202ENST00000504881 LAMA2P24043 3122 aaKnown RBP0.19□□□□□ -2.38
SRFBP1-202ENST00000504881 COL6A3P12111 3177 aa0.18□□□□□ -2.38
SRFBP1-202ENST00000504881 SYNE2Q8WXH0 6885 aaKnown RBP0.18□□□□□ -2.38
SRFBP1-202ENST00000504881 BOD1L1Q8NFC6 3051 aa0.18□□□□□ -2.38
SRFBP1-202ENST00000504881 ZFHX4Q86UP3 3567 aa0.18□□□□□ -2.38
SRFBP1-202ENST00000504881 RANBP2P49792 3224 aaKnown RBP0.18□□□□□ -2.38
SRFBP1-202ENST00000504881 WDFY4Q6ZS81 3184 aa0.18□□□□□ -2.38
SRFBP1-202ENST00000504881 SPRR2EP22531 72 aa0.18□□□□□ -2.38
SRFBP1-202ENST00000504881 LYSTQ99698 3801 aa0.18□□□□□ -2.38
SRFBP1-202ENST00000504881 SZT2Q5T011 3432 aa0.17□□□□□ -2.38
SRFBP1-202ENST00000504881 LAMA5O15230 3695 aa0.17□□□□□ -2.38
SRFBP1-202ENST00000504881 CFAP47Q6ZTR5 3102 aa0.17□□□□□ -2.38
SRFBP1-202ENST00000504881 MT1EP04732 61 aa0.17□□□□□ -2.38
SRFBP1-202ENST00000504881 KRTAP6-2Q3LI66 62 aa0.17□□□□□ -2.38
SRFBP1-202ENST00000504881 SRCAPQ6ZRS2 3230 aa0.17□□□□□ -2.38
SRFBP1-202ENST00000504881 SPRR2GQ9BYE4 73 aa0.17□□□□□ -2.38
SRFBP1-202ENST00000504881 VPS13AQ96RL7 3174 aa0.17□□□□□ -2.38
SRFBP1-202ENST00000504881 CSMD1Q96PZ7 3565 aa0.17□□□□□ -2.38
SRFBP1-202ENST00000504881 BSNQ9UPA5 3926 aa0.17□□□□□ -2.38
SRFBP1-202ENST00000504881 VPS13BQ7Z7G8 4022 aa0.16□□□□□ -2.38
SRFBP1-202ENST00000504881 PRKDCP78527 4128 aaKnown RBP0.16□□□□□ -2.38
SRFBP1-202ENST00000504881 FLGP20930 4061 aaPredicted RBP0.16□□□□□ -2.38
SRFBP1-202ENST00000504881 DNAH3Q8TD57 4116 aa0.16□□□□□ -2.38
SRFBP1-202ENST00000504881 KMT2AQ03164 3969 aa0.16□□□□□ -2.38
SRFBP1-202ENST00000504881 HSPG2P98160 4391 aa0.16□□□□□ -2.38
SRFBP1-202ENST00000504881 MT1HP80294 61 aa0.16□□□□□ -2.38
SRFBP1-202ENST00000504881 MT1LQ93083 61 aa0.16□□□□□ -2.38
SRFBP1-202ENST00000504881 CMYA5Q8N3K9 4069 aa0.16□□□□□ -2.38
SRFBP1-202ENST00000504881 PCNTO95613 3336 aa0.16□□□□□ -2.38
SRFBP1-202ENST00000504881 MKI67P46013 3256 aaKnown RBP0.16□□□□□ -2.38
SRFBP1-202ENST00000504881 DCHS1Q96JQ0 3298 aa0.15□□□□□ -2.39
SRFBP1-202ENST00000504881 CUBNO60494 3623 aa0.15□□□□□ -2.39
SRFBP1-202ENST00000504881 SVEP1Q4LDE5 3571 aa0.15□□□□□ -2.39
SRFBP1-202ENST00000504881 AKAP9Q99996 3911 aa0.15□□□□□ -2.39
SRFBP1-202ENST00000504881 TRRAPQ9Y4A5 3859 aa0.14□□□□□ -2.39
SRFBP1-202ENST00000504881 DYNC2H1Q8NCM8 4307 aaKnown RBP0.14□□□□□ -2.39
SRFBP1-202ENST00000504881 DNAH11Q96DT5 4516 aa0.14□□□□□ -2.39
SRFBP1-202ENST00000504881 VPS13DQ5THJ4 4388 aa0.14□□□□□ -2.39
SRFBP1-202ENST00000504881 DMDP11532 3685 aa0.14□□□□□ -2.39
SRFBP1-202ENST00000504881 MT1XP80297 61 aa0.14□□□□□ -2.39
SRFBP1-202ENST00000504881 KRTAP19-8Q3LI54 63 aa0.14□□□□□ -2.39
SRFBP1-202ENST00000504881 PKD1P98161 4303 aa0.14□□□□□ -2.39
SRFBP1-202ENST00000504881 FAT2Q9NYQ8 4349 aa0.14□□□□□ -2.39
SRFBP1-202ENST00000504881 DNAH1Q9P2D7 4330 aa0.14□□□□□ -2.39
SRFBP1-202ENST00000504881 SACSQ9NZJ4 4579 aa0.14□□□□□ -2.39
SRFBP1-202ENST00000504881 EYSQ5T1H1 3165 aa0.14□□□□□ -2.39
SRFBP1-202ENST00000504881 DNAH7Q8WXX0 4024 aa0.14□□□□□ -2.39
SRFBP1-202ENST00000504881 VCANP13611 3396 aa0.14□□□□□ -2.39
SRFBP1-202ENST00000504881 RELNP78509 3460 aa0.14□□□□□ -2.39
SRFBP1-202ENST00000504881 HUWE1Q7Z6Z7 4374 aaKnown RBP0.13□□□□□ -2.39
SRFBP1-202ENST00000504881 NBPF19A0A087WUL8 3843 aa0.13□□□□□ -2.39
SRFBP1-202ENST00000504881 DNAH6Q9C0G6 4158 aa0.13□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms